Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p19240 Brassica napus
A04p04230 Brassica napus
A07p29470 Brassica napus
A09p48760 Brassica napus
Aa31LG10G10740 Aethionema arabicum
Aa31LG1G8120 Aethionema arabicum
Aa31LG4G4550 Aethionema arabicum
Aa31LG7G3410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1161 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.695 Anthoceros agrestis
Actinidia00928 Actinidia chinensis
Actinidia13794 Actinidia chinensis
Actinidia29667 Actinidia chinensis
Ah.02g111160 Amaranthus hybridus
Ah.11g051010 Amaranthus hybridus
Ah.16g103010 Amaranthus hybridus
AL1G17190 Arabidopsis lyrata
AL2G34150 Arabidopsis lyrata
Aqoxy1G00751 Aquilegia oxysepala
Aqoxy7G04051 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CNK5YI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GLN9RQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LYRG6E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MXS7GY Arachis hypogaea
AT1G07070 Arabidopsis thaliana
AT1G41880 Arabidopsis thaliana
AT1G74270 Arabidopsis thaliana
AT3G55750 Arabidopsis thaliana
ATR0618G052 Amborella trichopoda
Atru.chr1.646 Acer truncatum
Atru.chr12.286 Acer truncatum
Atru.chr12.325 Acer truncatum
Atru.chr8.2130 Acer truncatum
AUR62012190 Chenopodium quinoa
AUR62022824 Chenopodium quinoa
AUR62024463 Chenopodium quinoa
AUR62026053 Chenopodium quinoa
AUR62039998 Chenopodium quinoa
AUR62040304 Chenopodium quinoa
BcaB01g00064 Brassica carinata
BcaB02g08400 Brassica carinata
BcaB05g24848 Brassica carinata
BcaC03g15493 Brassica carinata
BcaC03g15498 Brassica carinata
BcaC07g39902 Brassica carinata
BcaC08g45596 Brassica carinata
BcaC08g46859 Brassica carinata
BolC2t09210H Brassica oleracea
BolC6t38458H Brassica oleracea
BolC6t39874H Brassica oleracea
BolC8t50729H Brassica oleracea
BraA02t06970Z Brassica rapa
BraA07t31554Z Brassica rapa
BraA09t40328Z Brassica rapa
C02p31830 Brassica napus
C06p33430 Brassica napus
C08p31080 Brassica napus
CANSAT35G2013 Cannabis sativa
CANSAT56G0540 Cannabis sativa
CARHR006760 Cardamine hirsuta
CARHR067530 Cardamine hirsuta
CARHR165860 Cardamine hirsuta
Carub.0001s0636 Capsella rubella
Carub.0002s2106 Capsella rubella
Carub.0005s2254 Capsella rubella
Ca_05923_v3 Cicer arietinum L.
Ca_09085_v3 Cicer arietinum L.
Ca_25105_v3 Cicer arietinum L.
CBR_g30263 Chara braunii
CBR_g50044 Chara braunii
Cc02_g06370 Coffea canephora
Cc02_g06380 Coffea canephora
Cc02_g07030 Coffea canephora
CDE02G1463 Ceratophyllum demersum
CDE04G1354 Ceratophyllum demersum
Cfa001376 Carpinus fangiana
Cfa017267 Carpinus fangiana
Cfa024589 Carpinus fangiana
Ciclev10003310m.g Citrus clementina
Ciclev10003325m.g Citrus clementina
Ciclev10013164m.g Citrus clementina
Ciclev10033116m.g Citrus clementina
CiPaw.01G294500 Carya illinoinensis
CiPaw.01G294600 Carya illinoinensis
CiPaw.02G189100 Carya illinoinensis
ClCG04G001550 Citrullus lanatus
ClCG07G003850 Citrullus lanatus
ClCG11G019250 Citrullus lanatus
COL.COLO4_14631 Corchorus olitorius
COL.COLO4_25611 Corchorus olitorius
Cpa.g.sc19.232 Carica papaya
Cpa.g.sc56.99 Carica papaya
Cre10.g459250 Chlamydomonas reinhardtii
CsaV3_4G030970 Cucumis sativus L.
CsaV3_5G008790 Cucumis sativus L.
CSS0038847 Camellia sinensis var. sinensis
DCAR_024841 Daucus carota
DCAR_027560 Daucus carota
Dinv20935 Davidia involucrata
Dinv21009 Davidia involucrata
Dinv34436 Davidia involucrata
Dinv35520 Davidia involucrata
Duzib093G0622 Durio zibethinus
Duzib106G0106 Durio zibethinus
Duzib106G0641 Durio zibethinus
Duzib114G0519 Durio zibethinus
Duzib128G0417 Durio zibethinus
Duzib128G0873 Durio zibethinus
Duzib138G0063 Durio zibethinus
ECA232G3223 Erigeron canadensis
ECA233G2138 Erigeron canadensis
ECA238G0240 Erigeron canadensis
EL10Ac2g04769 Beta vulgaris
Eucgr.H04737 Eucalyptus grandis
Eucgr.J00247 Eucalyptus grandis
FAN01G0882 Fragaria x ananassa
FAN02G1164 Fragaria x ananassa
FAN03G0934 Fragaria x ananassa
FAN05G5171 Fragaria x ananassa
FAN06G1808 Fragaria x ananassa
FAN09G3445 Fragaria x ananassa
FAN10G4339 Fragaria x ananassa
FAN11G1792 Fragaria x ananassa
FAN11G3634 Fragaria x ananassa
FAN12G3055 Fragaria x ananassa
FAN14G0075 Fragaria x ananassa
FAN16G1583 Fragaria x ananassa
FAN21G1228 Fragaria x ananassa
FAN21G1892 Fragaria x ananassa
FAN21G3626 Fragaria x ananassa
FvH4_3g11060 Fragaria vesca
FvH4_3g11070 Fragaria vesca
FvH4_4g10520 Fragaria vesca
FvH4_5g24700 Fragaria vesca
FvH4_6g12240 Fragaria vesca
FvH4_7g23810 Fragaria vesca
Glyma.02G253500 Glycine max
Glyma.05G132500 Glycine max
Glyma.08G087000 Glycine max
Glyma.14G062900 Glycine max
Gohir.A01G224400 Gossypium hirsutum
Gohir.A06G165100 Gossypium hirsutum
Gohir.A10G228500 Gossypium hirsutum
Gohir.A13G016900 Gossypium hirsutum
Gohir.D01G213700 Gossypium hirsutum
Gohir.D04G066100 Gossypium hirsutum
Gohir.D06G170600 Gossypium hirsutum
Gohir.D10G242500 Gossypium hirsutum
Gohir.D13G018000 Gossypium hirsutum
Gorai.002G259800 Gossypium raimondii
Gorai.010G118400 Gossypium raimondii
Gorai.010G199500 Gossypium raimondii
Gorai.011G278900 Gossypium raimondii
Gorai.012G074800 Gossypium raimondii
Gorai.013G020000 Gossypium raimondii
GSVIVG01016386001 Vitis vinifera
GSVIVG01034025001 Vitis vinifera
HanXRQChr01g0027131 Helianthus annuus
HanXRQChr07g0202261 Helianthus annuus
HanXRQChr08g0222201 Helianthus annuus
HanXRQChr09g0246901 Helianthus annuus
HanXRQChr12g0369371 Helianthus annuus
HanXRQChr14g0458851 Helianthus annuus
Haze_17170 Corylus avellana
Haze_26144 Corylus avellana
Hma1.2p1_0026F.1_g016863 Hydrangea macrophylla
Hma1.2p1_0026F.1_g016866 Hydrangea macrophylla
Hma1.2p1_0026F.1_g016880 Hydrangea macrophylla
Hma1.2p1_0026F.1_g016890 Hydrangea macrophylla
Hma1.2p1_0710F.1_g207440 Hydrangea macrophylla
HPP92_022843 Vanilla planifolia
HPP92_026122 Vanilla planifolia
Hund13824 Selenicereus undatus
Lalb_Chr04g0250811 Lupinus albus
Lalb_Chr07g0188371 Lupinus albus
Lalb_Chr10g0104951 Lupinus albus
Lalb_Chr12g0209061 Lupinus albus
Lalb_Chr17g0346501 Lupinus albus
Lj4g0014964 Lotus japonicus
LjContig00141g0019461 Lotus japonicus
Lsat_1_v5_gn_2_120360 Lactuca sativa
Lsat_1_v5_gn_8_14240 Lactuca sativa
Lsat_1_v5_gn_9_63160 Lactuca sativa
Manes.07G124200 Manihot esculenta
Manes.09G100900 Manihot esculenta
Manes.10G019200 Manihot esculenta
Mapoly0014s0079 Marchantia polymorpha
MBI02_g02727_MAGBIO Magnolia biondii
MBI05_g30236_MAGBIO Magnolia biondii
MBI12_g01342_MAGBIO Magnolia biondii
MBI12_g26866_MAGBIO Magnolia biondii
MBI14_g32926_MAGBIO Magnolia biondii
MBI18_g06637_MAGBIO Magnolia biondii
MBI18_g09840_MAGBIO Magnolia biondii
MCO14G526 Micromonas commoda
MD01G1145400 Malus domestica
MD04G1144800 Malus domestica
MD07G1212600 Malus domestica
MD12G1158700 Malus domestica
Medtr0699s0010 Medicago truncatula
Medtr0699s0020 Medicago truncatula
Medtr5g081705 Medicago truncatula
MELO3C008974.2 Cucumis melo
MELO3C025140.2 Cucumis melo
MELO3C029565.2 Cucumis melo
Migut.J00235 Erythranthe guttata
Migut.J00238 Erythranthe guttata
Migut.L01988 Erythranthe guttata
MSTRG.10235 Avicennia marina
MSTRG.19036 Avicennia marina
MSTRG.26794 Avicennia marina
MSTRG.5604 Avicennia marina
Nitab4.5_0000153g0040 Nicotiana tabacum
Nitab4.5_0000278g0120 Nicotiana tabacum
Nitab4.5_0000278g0200 Nicotiana tabacum
Nitab4.5_0002057g0010 Nicotiana tabacum
Nitab4.5_0003138g0020 Nicotiana tabacum
Nitab4.5_0003932g0010 Nicotiana tabacum
Nitab4.5_0004338g0020 Nicotiana tabacum
Nitab4.5_0005850g0020 Nicotiana tabacum
Nitab4.5_0008712g0040 Nicotiana tabacum
Nn2g11336 Nelumbo nucifera
Oeu006663.1 Olea europaea
Oeu038992.1 Olea europaea
Os02g0785800 Oryza sativa ssp. japonica
Os05g0555800 Oryza sativa ssp. japonica
Os05g0556900 Oryza sativa ssp. japonica
Peaxi162Scf00951g00342 Petunia axillaris
Peaxi162Scf00957g00016 Petunia axillaris
PGR044G0415 Punica granatum
PGR142G2329 Punica granatum
PGSC0003DMG400012101 Solanum tuberosum
PGSC0003DMG400018071 Solanum tuberosum
PGSC0003DMG402027186 Solanum tuberosum
PGSC0003DMG403024074 Solanum tuberosum
Phvul.002G190400 Phaseolus vulgaris
Phvul.008G227300 Phaseolus vulgaris
Potri.008G059400 Populus trichocarpa
Potri.008G063200 Populus trichocarpa
Potri.010G194200 Populus trichocarpa
Potri.010G199400 Populus trichocarpa
Pp3c11_9630 Physcomitrium patens
Pp3c13_8360 Physcomitrium patens
Pp3c1_4030 Physcomitrium patens
Pp3c3_3480 Physcomitrium patens
Pp3c4_29970 Physcomitrium patens
Pp3c7_17970 Physcomitrium patens
PRCOL_00004251 Prasinoderma coloniale
Prupe.2G244800 Prunus persica
Prupe.6G269100 Prunus persica
Psat2g035880 Pisum sativum
Psat3g027200 Pisum sativum
Psat7g088640 Pisum sativum
PSO017G0988 Papaver somniferum
PSO017G3551 Papaver somniferum
PSO585G0036 Papaver somniferum
PSO675G0849 Papaver somniferum
PSO675G2233 Papaver somniferum
QL07p036266 Quercus lobata
QL08p062434 Quercus lobata
RcHm_v2.0_Chr1g0369181 Rosa chinensis
RcHm_v2.0_Chr3g0464041 Rosa chinensis
RcHm_v2.0_Chr5g0017881 Rosa chinensis
RcHm_v2.0_Chr5g0018121 Rosa chinensis
RcHm_v2.0_Chr5g0018131 Rosa chinensis
Rhsim05G0149300 Rhododendron simsii
Rhsim09G0171500 Rhododendron simsii
Sabra08G0043600 Salix brachista
Sabra08G0046600 Salix brachista
Sabra10G0153600 Salix brachista
SalBow3G0745 Salvia bowleyana
SalBow4G1876 Salvia bowleyana
Sc07g0006900 Simmondsia chinensis
Sc10g0002090 Simmondsia chinensis
Sc11g0007390 Simmondsia chinensis
Sed0004198 Sechium edule
Sed0009115 Sechium edule
Sed0010487 Sechium edule
SGA_v2.0_scaffold75G24992 Striga asiatica
SGA_v2.0_scaffold85G26781 Striga asiatica
SGA_v2.0_scaffold94G28546 Striga asiatica
SHI21622 Sapria himalayana
SMO285G0003 Selaginella moellendorffii
SMO348G0041 Selaginella moellendorffii
Solyc03g096360.4 Solanum lycopersicum
Solyc05g052800.3 Solanum lycopersicum
Solyc05g052810.4 Solanum lycopersicum
Sopen03g026480 Solanum pennellii
Sopen05g031310 Solanum pennellii
Sopen05g031320 Solanum pennellii
Sp1g05790 Schrenkiella parvula
Sp5g06720 Schrenkiella parvula
Sp5g29450 Schrenkiella parvula
TAR623G1575 Trochodendron aralioides
TAR633G1189 Trochodendron aralioides
TAR636G3675 Trochodendron aralioides
THA.LOC104809689 Tarenaya hassleriana
THA.LOC104810055 Tarenaya hassleriana
THA.LOC104812100 Tarenaya hassleriana
THA.LOC104813888 Tarenaya hassleriana
THA.LOC104824293 Tarenaya hassleriana
Thecc.05G023900 Theobroma cacao
Thecc.10G027700 Theobroma cacao
Thhalv10009155m.g Eutrema salsugineum
Thhalv10010844m.g Eutrema salsugineum
Thhalv10019342m.g Eutrema salsugineum
Thhalv10021832m.g Eutrema salsugineum
TPR.G12264 Trifolium pratense
TPR.G34438 Trifolium pratense
TPR.G91 Trifolium pratense
TWI53G1181 Tripterygium wilfordii
TWI73G1063 Tripterygium wilfordii
TWI74G1009 Tripterygium wilfordii
unitig_22.g6589 Utricularia gibba
unitig_578.g15890 Utricularia gibba
unitig_8.g4445 Utricularia gibba
vmacro07005 Vaccinium macrocarpon
vmacro10071 Vaccinium macrocarpon
VMungo0647G2465 Vigna mungo
Zm00001eb098510 Zea mays
Zm00001eb192860 Zea mays
Zm00001eb310700 Zea mays
Zm00001eb374200 Zea mays

User provided reference genes

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