Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p25010 Brassica napus
A03p30790 Brassica napus
A03p30800 Brassica napus
A04p12760 Brassica napus
A04p12770 Brassica napus
A04p28620 Brassica napus
A10p01790 Brassica napus
Aa31LG1G9300 Aethionema arabicum
Aa31LG5G2390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.250 Anthoceros agrestis
Actinidia00742 Actinidia chinensis
Actinidia00743 Actinidia chinensis
Ah.01g024320 Amaranthus hybridus
Ah.08g212120 Amaranthus hybridus
AL1G12690 Arabidopsis lyrata
AL6G50060 Arabidopsis lyrata
AL6G50070 Arabidopsis lyrata
AL6G50080 Arabidopsis lyrata
Aqoxy4G00309 Aquilegia oxysepala
Aqoxy4G00454 Aquilegia oxysepala
Aqoxy5G00530 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.17XFIN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.444P5F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A9INEB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K2G5V4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KT0H3U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LQ2L35 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SB411A Arachis hypogaea
AT1G03210 Arabidopsis thaliana
AT4G02850 Arabidopsis thaliana
AT4G02860 Arabidopsis thaliana
ATR0626G139 Amborella trichopoda
ATR1100G005 Amborella trichopoda
ATR1120G059 Amborella trichopoda
ATR1153G043 Amborella trichopoda
Atru.chr5.1390 Acer truncatum
Atru.chr5.1391 Acer truncatum
Atru.chr5.1392 Acer truncatum
AUR62027057 Chenopodium quinoa
AUR62030509 Chenopodium quinoa
AUR62030900 Chenopodium quinoa
AUR62036797 Chenopodium quinoa
AUR62036798 Chenopodium quinoa
AUR62039910 Chenopodium quinoa
BcaB05g23667 Brassica carinata
BcaB05g23668 Brassica carinata
BcaB06g28997 Brassica carinata
BcaC01g06724 Brassica carinata
BcaC02g07531 Brassica carinata
BcaC02g08598 Brassica carinata
BcaC02g10038 Brassica carinata
BcaC03g16186 Brassica carinata
BcaC05g24552 Brassica carinata
BcaC05g24633 Brassica carinata
BcaC05g24634 Brassica carinata
BcaC05g24636 Brassica carinata
BcaNung06831 Brassica carinata
BolC2t09980H Brassica oleracea
BolC3t16039H Brassica oleracea
BolC4t24931H Brassica oleracea
BolC4t28098H Brassica oleracea
BolC5t28955H Brassica oleracea
BraA02t07490Z Brassica rapa
BraA03t12257Z Brassica rapa
BraA04t16937Z Brassica rapa
BraA04t16938Z Brassica rapa
BraA04t16939Z Brassica rapa
BraA04t18339Z Brassica rapa
BraA10t42454Z Brassica rapa
C02p39640 Brassica napus
C03p37470 Brassica napus
C03p37480 Brassica napus
C04p33630 Brassica napus
C04p65940 Brassica napus
C05p01770 Brassica napus
C06p32200 Brassica napus
CAN.G242.12 Capsicum annuum
CAN.G294.18 Capsicum annuum
CAN.G609.12 Capsicum annuum
CAN.G609.13 Capsicum annuum
CANSAT25G0628 Cannabis sativa
CANSAT78G0191 Cannabis sativa
CANSAT78G0988 Cannabis sativa
CARHR002540 Cardamine hirsuta
CARHR251220 Cardamine hirsuta
CARHR251230 Cardamine hirsuta
CARHR251240 Cardamine hirsuta
CARHR251250 Cardamine hirsuta
CARHR251260 Cardamine hirsuta
Carub.0001s0235 Capsella rubella
Carub.0004s0501 Capsella rubella
Carub.0005s1239 Capsella rubella
Carub.0006s3420 Capsella rubella
Ca_09766_v3 Cicer arietinum L.
CBR_g31947 Chara braunii
Cc01_g19310 Coffea canephora
Cc01_g19670 Coffea canephora
Cc04_g02740 Coffea canephora
CDE02G0368 Ceratophyllum demersum
CDE04G3389 Ceratophyllum demersum
Cfa006119 Carpinus fangiana
Cfa006120 Carpinus fangiana
Cfa024944 Carpinus fangiana
Ciclev10021390m.g Citrus clementina
Ciclev10021398m.g Citrus clementina
Ciclev10021404m.g Citrus clementina
Ciclev10024334m.g Citrus clementina
CiPaw.08G104300 Carya illinoinensis
ClCG09G006940 Citrullus lanatus
COL.COLO4_09125 Corchorus olitorius
COL.COLO4_09126 Corchorus olitorius
COL.COLO4_09127 Corchorus olitorius
Cpa.g.sc52.10 Carica papaya
Cpa.g.sc52.9 Carica papaya
Cre06.g278261 Chlamydomonas reinhardtii
CsaV3_7G028220 Cucumis sativus L.
CsaV3_7G028230 Cucumis sativus L.
CsaV3_7G028670 Cucumis sativus L.
CsaV3_7G028680 Cucumis sativus L.
CSS0004201 Camellia sinensis var. sinensis
CSS0012397 Camellia sinensis var. sinensis
CSS0016865 Camellia sinensis var. sinensis
CSS0027342 Camellia sinensis var. sinensis
CSS0041410 Camellia sinensis var. sinensis
CSS0047050 Camellia sinensis var. sinensis
Dinv11247 Davidia involucrata
Dinv32950 Davidia involucrata
Duzib133G0902 Durio zibethinus
Duzib133G1486 Durio zibethinus
Duzib211G0688 Durio zibethinus
ECA248G0248 Erigeron canadensis
ECA248G2655 Erigeron canadensis
EL10Ac7g17223 Beta vulgaris
EL10Ac9g22150 Beta vulgaris
Eucgr.C01248 Eucalyptus grandis
Eucgr.C01249 Eucalyptus grandis
Eucgr.C01250 Eucalyptus grandis
Eucgr.C01251 Eucalyptus grandis
Eucgr.C01253 Eucalyptus grandis
Eucgr.C01254 Eucalyptus grandis
Eucgr.C01255 Eucalyptus grandis
Eucgr.C02450 Eucalyptus grandis
Eucgr.C02452 Eucalyptus grandis
Eucgr.C02453 Eucalyptus grandis
Eucgr.C02454 Eucalyptus grandis
Eucgr.C02456 Eucalyptus grandis
Eucgr.C02457 Eucalyptus grandis
Eucgr.C02458 Eucalyptus grandis
Eucgr.C02459 Eucalyptus grandis
FAN03G1931 Fragaria x ananassa
FAN15G0598 Fragaria x ananassa
FAN15G0818 Fragaria x ananassa
FAN24G2019 Fragaria x ananassa
FAN24G2879 Fragaria x ananassa
FAN27G0935 Fragaria x ananassa
FvH4_2g23790 Fragaria vesca
FvH4_2g23800 Fragaria vesca
FvH4_2g23801 Fragaria vesca
Glyma.02G148300 Glycine max
Glyma.02G148400 Glycine max
Glyma.10G025500 Glycine max
Glyma.13G321500 Glycine max
Gohir.A08G068900 Gossypium hirsutum
Gohir.A08G069000 Gossypium hirsutum
Gohir.D08G077150 Gossypium hirsutum
Gohir.D08G077200 Gossypium hirsutum
Gohir.D08G077300 Gossypium hirsutum
Gorai.004G081900 Gossypium raimondii
Gorai.004G082000 Gossypium raimondii
Gorai.004G082200 Gossypium raimondii
GSVIVG01011112001 Vitis vinifera
GSVIVG01011113001 Vitis vinifera
GSVIVG01011114001 Vitis vinifera
HanXRQChr01g0002271 Helianthus annuus
HanXRQChr01g0002281 Helianthus annuus
HanXRQChr01g0002291 Helianthus annuus
HanXRQChr05g0155811 Helianthus annuus
Haze_04731 Corylus avellana
Hma1.2p1_0628F.1_g192000 Hydrangea macrophylla
Hma1.2p1_0628F.1_g192010 Hydrangea macrophylla
HPP92_025285 Vanilla planifolia
Hund17989 Selenicereus undatus
Lalb_Chr06g0163061 Lupinus albus
Lalb_Chr06g0163071 Lupinus albus
Lj2A1175T53 Lonicera japonica
Lj5g0004192 Lotus japonicus
Lj5g0023624 Lotus japonicus
Lj5g0025971 Lotus japonicus
Lsat_1_v5_gn_5_190081 Lactuca sativa
Lsat_1_v5_gn_5_190120 Lactuca sativa
Lsat_1_v5_gn_5_190180 Lactuca sativa
Manes.01G183900 Manihot esculenta
Manes.01G209000 Manihot esculenta
Manes.05G074500 Manihot esculenta
Manes.05G074600 Manihot esculenta
Manes.05G074700 Manihot esculenta
Mapoly0011s0056 Marchantia polymorpha
Mapoly0025s0075 Marchantia polymorpha
MBI17_g16070_MAGBIO Magnolia biondii
MBI17_g34455_MAGBIO Magnolia biondii
MBI19_g24721_MAGBIO Magnolia biondii
MCO16G512 Micromonas commoda
MD03G1267500 Malus domestica
MD03G1267600 Malus domestica
MD11G1288000 Malus domestica
MD11G1288100 Malus domestica
MD11G1288200 Malus domestica
MD11G1288400 Malus domestica
MD11G1288500 Malus domestica
Medtr1g062440 Medicago truncatula
Medtr1g062500 Medicago truncatula
Medtr1g062510 Medicago truncatula
Medtr1g062530 Medicago truncatula
Medtr1g062540 Medicago truncatula
Medtr1g072470 Medicago truncatula
Medtr1g072490 Medicago truncatula
Medtr1g072500 Medicago truncatula
Medtr4g107220 Medicago truncatula
MELO3C015846.2 Cucumis melo
MELO3C015848.2 Cucumis melo
MELO3C015849.2 Cucumis melo
MELO3C015850.2 Cucumis melo
Migut.D00276 Erythranthe guttata
Migut.D00279 Erythranthe guttata
Migut.D00280 Erythranthe guttata
MSTRG.18223 Avicennia marina
Nitab4.5_0001028g0120 Nicotiana tabacum
Nitab4.5_0001028g0130 Nicotiana tabacum
Nitab4.5_0001028g0150 Nicotiana tabacum
Nitab4.5_0002386g0100 Nicotiana tabacum
Nitab4.5_0003875g0010 Nicotiana tabacum
Nitab4.5_0010554g0030 Nicotiana tabacum
Nn4g26196 Nelumbo nucifera
Oeu015961.1 Olea europaea
Os01g0266500 Oryza sativa ssp. japonica
Os03g0434400 Oryza sativa ssp. japonica
Os11g0406945 Oryza sativa ssp. japonica
Peaxi162Scf00570g00059 Petunia axillaris
Peaxi162Scf00570g00068 Petunia axillaris
Peaxi162Scf00777g00029 Petunia axillaris
PGR119G0488 Punica granatum
PGR119G0992 Punica granatum
PGSC0003DMG400000951 Solanum tuberosum
PGSC0003DMG400000952 Solanum tuberosum
PGSC0003DMG400047054 Solanum tuberosum
Phvul.005G129900 Phaseolus vulgaris
Phvul.007G170400 Phaseolus vulgaris
Phvul.007G170600 Phaseolus vulgaris
Phvul.007G170800 Phaseolus vulgaris
Potri.010G175700 Populus trichocarpa
Potri.010G175701 Populus trichocarpa
Pp3c19_19120 Physcomitrium patens
Pp3c21_4740 Physcomitrium patens
Pp3c2_15950 Physcomitrium patens
PRCOL_00002842 Prasinoderma coloniale
PRCOL_00002913 Prasinoderma coloniale
Prupe.8G243200 Prunus persica
Prupe.8G243300 Prunus persica
Psat6g125880 Pisum sativum
PSO063G7480 Papaver somniferum
PSO210G3666 Papaver somniferum
PSO268G0001 Papaver somniferum
PSO478G0191 Papaver somniferum
PSO724G0018 Papaver somniferum
PSO724G0983 Papaver somniferum
PSO729G0065 Papaver somniferum
PSO782G3752 Papaver somniferum
PSO782G4756 Papaver somniferum
QL02p100842 Quercus lobata
QL04p046038 Quercus lobata
QL12p022188 Quercus lobata
QL12p022217 Quercus lobata
QL12p022222 Quercus lobata
QL12p022227 Quercus lobata
QL12p022233 Quercus lobata
RcHm_v2.0_Chr6g0291351 Rosa chinensis
RcHm_v2.0_Chr6g0291361 Rosa chinensis
RcHm_v2.0_Chr6g0291371 Rosa chinensis
Rhsim13G0023600 Rhododendron simsii
SalBow4G1786 Salvia bowleyana
Sc12g0003660 Simmondsia chinensis
Sc17g0004020 Simmondsia chinensis
Sc24g0003070 Simmondsia chinensis
Sed0024964 Sechium edule
SEGI_01849 Sequoiadendron giganteum
SEGI_05238 Sequoiadendron giganteum
SEGI_28157 Sequoiadendron giganteum
SEGI_34507 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05804 Striga asiatica
SMO239G0132 Selaginella moellendorffii
SMO347G0138 Selaginella moellendorffii
Solyc09g064940.2 Solanum lycopersicum
Sopen09g026650 Solanum pennellii
Sp6g02880 Schrenkiella parvula
Sp6g02890 Schrenkiella parvula
Sp6g02900 Schrenkiella parvula
Sp6g02910 Schrenkiella parvula
TAR633G0222 Trochodendron aralioides
TAR633G2829 Trochodendron aralioides
THA.LOC104801228 Tarenaya hassleriana
THA.LOC104815945 Tarenaya hassleriana
THA.LOC104816931 Tarenaya hassleriana
Thecc.01G282200 Theobroma cacao
Thecc.01G282300 Theobroma cacao
Thhalv10008339m.g Eutrema salsugineum
Thhalv10028852m.g Eutrema salsugineum
Thhalv10029516m.g Eutrema salsugineum
Thhalv10029533m.g Eutrema salsugineum
TPR.G1579 Trifolium pratense
TPR.G1582 Trifolium pratense
TPR.G1597 Trifolium pratense
TWI14G0923 Tripterygium wilfordii
TWI59G0848 Tripterygium wilfordii
unitig_0.g1209 Utricularia gibba
vmacro02557 Vaccinium macrocarpon
vmacro02558 Vaccinium macrocarpon
vmacro02559 Vaccinium macrocarpon
vmacro19594 Vaccinium macrocarpon
VMungo0720G0847 Vigna mungo
VMungo0720G1677 Vigna mungo
VMungo0720G2457 Vigna mungo
VMungo0720G2837 Vigna mungo
Zm00001eb333190 Zea mays

User provided reference genes

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