Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04380 Brassica napus
A03p39080 Brassica napus
A03p62540 Brassica napus
A04p07530 Brassica napus
A05p34430 Brassica napus
A06p01080 Brassica napus
A08p01690 Brassica napus
Aa31LG10G1870 Aethionema arabicum
Aa31LG2G16440 Aethionema arabicum
Aa31LG8G2190 Aethionema arabicum
Aa31LG8G2200 Aethionema arabicum
Aa31LG8G2210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2445 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2447 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2906 Anthoceros agrestis
Actinidia12563 Actinidia chinensis
Actinidia12944 Actinidia chinensis
Actinidia31602 Actinidia chinensis
Ah.01g023320 Amaranthus hybridus
Ah.04g164390 Amaranthus hybridus
AL1G61700 Arabidopsis lyrata
AL3G27320 Arabidopsis lyrata
AL7G17370 Arabidopsis lyrata
Aqoxy1G03231 Aquilegia oxysepala
Aqoxy5G01643 Aquilegia oxysepala
Aqoxy6G01307 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3HLQ07 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3V0HJR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5I1IFA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A4HWYP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NL9WC0 Arachis hypogaea
AT1G53280 Arabidopsis thaliana
AT3G14990 Arabidopsis thaliana
AT4G34020 Arabidopsis thaliana
ATR0009G010 Amborella trichopoda
ATR0602G066 Amborella trichopoda
Atru.chr2.2207 Acer truncatum
Atru.chr5.2687 Acer truncatum
AUR62010004 Chenopodium quinoa
AUR62012992 Chenopodium quinoa
AUR62012993 Chenopodium quinoa
AUR62019534 Chenopodium quinoa
AUR62036103 Chenopodium quinoa
BcaB02g08604 Brassica carinata
BcaB04g17093 Brassica carinata
BcaB06g25328 Brassica carinata
BcaB06g25339 Brassica carinata
BcaB06g25341 Brassica carinata
BcaB06g25342 Brassica carinata
BcaB06g29527 Brassica carinata
BcaB07g33342 Brassica carinata
BcaC01g01374 Brassica carinata
BcaC01g03909 Brassica carinata
BcaC02g08746 Brassica carinata
BcaC02g09304 Brassica carinata
BcaC05g26864 Brassica carinata
BcaC08g43516 Brassica carinata
BcaC08g43518 Brassica carinata
BcaNung03787 Brassica carinata
BcaNung03788 Brassica carinata
BcaNung06823 Brassica carinata
BolC1t00461H Brassica oleracea
BolC1t00462H Brassica oleracea
BolC3t17006H Brassica oleracea
BolC3t21447H Brassica oleracea
BolC4t25699H Brassica oleracea
BolC5t33905H Brassica oleracea
BolC6t35982H Brassica oleracea
BraA01t00426Z Brassica rapa
BraA03t13057Z Brassica rapa
BraA03t15326Z Brassica rapa
BraA04t16447Z Brassica rapa
BraA05t22262Z Brassica rapa
BraA06t23335Z Brassica rapa
BraA08t32222Z Brassica rapa
C01p04770 Brassica napus
C01p04780 Brassica napus
C03p47350 Brassica napus
C03p91320 Brassica napus
C04p41170 Brassica napus
C05p52190 Brassica napus
C06p09040 Brassica napus
CAN.G1041.35 Capsicum annuum
CAN.G162.16 Capsicum annuum
CANSAT25G0232 Cannabis sativa
CANSAT35G1300 Cannabis sativa
CARHR043510 Cardamine hirsuta
CARHR089950 Cardamine hirsuta
CARHR242150 Cardamine hirsuta
Carub.0001s4246 Capsella rubella
Carub.0003s1465 Capsella rubella
Carub.0007s0638 Capsella rubella
Ca_04001_v3 Cicer arietinum L.
Ca_18694_v3 Cicer arietinum L.
Ca_28648_v3 Cicer arietinum L.
CBR_g63061 Chara braunii
CBR_g63063 Chara braunii
Cc02_g18870 Coffea canephora
Cc05_g11280 Coffea canephora
CDE08G0997 Ceratophyllum demersum
Cfa019584 Carpinus fangiana
Ciclev10020189m.g Citrus clementina
Ciclev10020809m.g Citrus clementina
Ciclev10021210m.g Citrus clementina
Ciclev10021742m.g Citrus clementina
Ciclev10021981m.g Citrus clementina
Ciclev10022043m.g Citrus clementina
Ciclev10023138m.g Citrus clementina
Ciclev10023786m.g Citrus clementina
Ciclev10024164m.g Citrus clementina
Ciclev10024360m.g Citrus clementina
Ciclev10024392m.g Citrus clementina
Ciclev10028354m.g Citrus clementina
CiPaw.05G007200 Carya illinoinensis
CiPaw.11G162000 Carya illinoinensis
ClCG02G006010 Citrullus lanatus
ClCG07G010320 Citrullus lanatus
COL.COLO4_17592 Corchorus olitorius
COL.COLO4_32645 Corchorus olitorius
Cpa.g.sc131.55 Carica papaya
Cpa.g.sc62.3 Carica papaya
Cre01.g056331 Chlamydomonas reinhardtii
CsaV3_4G008010 Cucumis sativus L.
CsaV3_7G008520 Cucumis sativus L.
CSS0014771 Camellia sinensis var. sinensis
CSS0033895 Camellia sinensis var. sinensis
CSS0043426 Camellia sinensis var. sinensis
DCAR_017165 Daucus carota
DCAR_019592 Daucus carota
DCAR_022019 Daucus carota
Dinv15719 Davidia involucrata
Dinv18350 Davidia involucrata
Duzib187G1824 Durio zibethinus
ECA240G0819 Erigeron canadensis
ECA240G1518 Erigeron canadensis
EL10Ac4g08307 Beta vulgaris
EL10Ac4g08308 Beta vulgaris
EL10Ac4g08309 Beta vulgaris
EL10Ac9g21331 Beta vulgaris
Eucgr.F01221 Eucalyptus grandis
Eucgr.F01222 Eucalyptus grandis
Eucgr.G01435 Eucalyptus grandis
FAN11G2062 Fragaria x ananassa
FAN15G3661 Fragaria x ananassa
FAN16G1853 Fragaria x ananassa
FAN20G0739 Fragaria x ananassa
FAN24G3486 Fragaria x ananassa
FAN25G3236 Fragaria x ananassa
FAN27G1354 Fragaria x ananassa
FvH4_2g05880 Fragaria vesca
FvH4_3g18570 Fragaria vesca
Glyma.02G131600 Glycine max
Glyma.07G213200 Glycine max
Glyma.12G228600 Glycine max
Glyma.13G271200 Glycine max
Gohir.A01G056700 Gossypium hirsutum
Gohir.A01G056850 Gossypium hirsutum
Gohir.A04G040900 Gossypium hirsutum
Gohir.A13G041000 Gossypium hirsutum
Gohir.D01G043100 Gossypium hirsutum
Gohir.D01G043250 Gossypium hirsutum
Gohir.D05G342300 Gossypium hirsutum
Gohir.D13G039700 Gossypium hirsutum
Gorai.002G062100 Gossypium raimondii
Gorai.002G062300 Gossypium raimondii
Gorai.009G368600 Gossypium raimondii
Gorai.013G044600 Gossypium raimondii
GSVIVG01014220001 Vitis vinifera
GSVIVG01019261001 Vitis vinifera
GSVIVG01026746001 Vitis vinifera
GSVIVG01031729001 Vitis vinifera
HanXRQChr03g0075861 Helianthus annuus
HanXRQChr04g0100541 Helianthus annuus
HanXRQChr15g0471221 Helianthus annuus
HanXRQChr17g0548861 Helianthus annuus
Haze_09332 Corylus avellana
Haze_10088 Corylus avellana
Hma1.2p1_0416F.1_g148740 Hydrangea macrophylla
HPP92_000597 Vanilla planifolia
HPP92_000621 Vanilla planifolia
HPP92_000622 Vanilla planifolia
HPP92_024360 Vanilla planifolia
HPP92_024361 Vanilla planifolia
Hund02368 Selenicereus undatus
Hund08731 Selenicereus undatus
Hund08741 Selenicereus undatus
Lalb_Chr01g0016651 Lupinus albus
Lalb_Chr09g0328381 Lupinus albus
Lj1A832G37 Lonicera japonica
Lj3g0025368 Lotus japonicus
Lj4g0016311 Lotus japonicus
Lj5A210G94 Lonicera japonica
Lsat_1_v5_gn_9_111000 Lactuca sativa
Lsat_1_v5_gn_9_99500 Lactuca sativa
Lsat_1_v5_gn_9_99540 Lactuca sativa
Manes.10G080900 Manihot esculenta
Manes.15G092700 Manihot esculenta
Mapoly0067s0002 Marchantia polymorpha
MBI01_g16483_MAGBIO Magnolia biondii
MBI01_g41083_MAGBIO Magnolia biondii
MBI03_g13477_MAGBIO Magnolia biondii
MBI07_g02211_MAGBIO Magnolia biondii
MBI07_g33320_MAGBIO Magnolia biondii
MBI08_g17321_MAGBIO Magnolia biondii
MBI09_g27610_MAGBIO Magnolia biondii
MBI10_g19824_MAGBIO Magnolia biondii
MBI11_g21610_MAGBIO Magnolia biondii
MBI13_g17978_MAGBIO Magnolia biondii
MBI14_g46237_MAGBIO Magnolia biondii
MBI17_g17193_MAGBIO Magnolia biondii
MCO02G264 Micromonas commoda
MD03G1241000 Malus domestica
MD05G1082200 Malus domestica
MD11G1260500 Malus domestica
Medtr2g078060 Medicago truncatula
Medtr4g085900 Medicago truncatula
MELO3C016136.2 Cucumis melo
MELO3C018457.2 Cucumis melo
MELO3C021005.2 Cucumis melo
Migut.H01985 Erythranthe guttata
Migut.N01184 Erythranthe guttata
MSTRG.12874 Avicennia marina
MSTRG.20161 Avicennia marina
Nitab4.5_0000246g0160 Nicotiana tabacum
Nitab4.5_0001428g0100 Nicotiana tabacum
Nitab4.5_0003080g0050 Nicotiana tabacum
Nitab4.5_0012402g0010 Nicotiana tabacum
Nn1g04390 Nelumbo nucifera
Nn1g04837 Nelumbo nucifera
Nn1g09080 Nelumbo nucifera
Oeu010593.1 Olea europaea
Oeu051123.1 Olea europaea
Os01g0217500 Oryza sativa ssp. japonica
Os01g0217800 Oryza sativa ssp. japonica
Os05g0519600 Oryza sativa ssp. japonica
Os06g0531200 Oryza sativa ssp. japonica
Peaxi162Scf00016g01912 Petunia axillaris
Peaxi162Scf00069g02132 Petunia axillaris
PGR031G0454 Punica granatum
PGR042G0936 Punica granatum
PGSC0003DMG400012391 Solanum tuberosum
PGSC0003DMG400025786 Solanum tuberosum
Phvul.003G218100 Phaseolus vulgaris
Phvul.003G291700 Phaseolus vulgaris
Phvul.005G067500 Phaseolus vulgaris
Potri.009G100900 Populus trichocarpa
Potri.011G111900 Populus trichocarpa
Pp3c20_17570 Physcomitrium patens
Pp3c8_11120 Physcomitrium patens
PRCOL_00002036 Prasinoderma coloniale
Prupe.4G167800 Prunus persica
Prupe.4G167900 Prunus persica
Prupe.8G126700 Prunus persica
Psat5g237920 Pisum sativum
Psat7g122720 Pisum sativum
PSO541G1723 Papaver somniferum
PSO541G5956 Papaver somniferum
PSO675G1979 Papaver somniferum
PSO675G3236 Papaver somniferum
QL08p026708 Quercus lobata
QL11p035405 Quercus lobata
RcHm_v2.0_Chr2g0127521 Rosa chinensis
RcHm_v2.0_Chr5g0031321 Rosa chinensis
RcHm_v2.0_Chr5g0031331 Rosa chinensis
RcHm_v2.0_Chr5g0031361 Rosa chinensis
RcHm_v2.0_Chr5g0031371 Rosa chinensis
RcHm_v2.0_Chr5g0077921 Rosa chinensis
RcHm_v2.0_Chr6g0257661 Rosa chinensis
RcHm_v2.0_Chr7g0224991 Rosa chinensis
Rhsim06G0206200 Rhododendron simsii
Rhsim06G0206300 Rhododendron simsii
Rhsim11G0164900 Rhododendron simsii
Sabra09G0076800 Salix brachista
Sabra11G0099100 Salix brachista
SalBow3G4499 Salvia bowleyana
SalBow7G2775 Salvia bowleyana
Sc03g0010460 Simmondsia chinensis
Sc14g0002210 Simmondsia chinensis
Sc18g0002480 Simmondsia chinensis
Sed0004966 Sechium edule
Sed0017535 Sechium edule
SEGI_03960 Sequoiadendron giganteum
SEGI_12602 Sequoiadendron giganteum
SEGI_18671 Sequoiadendron giganteum
SEGI_18784 Sequoiadendron giganteum
SEGI_24226 Sequoiadendron giganteum
SEGI_28286 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34306 Striga asiatica
SGA_v2.0_scaffold393G50692 Striga asiatica
SHI34775 Sapria himalayana
SMO361G0224 Selaginella moellendorffii
Solyc01g108070.4 Solanum lycopersicum
Solyc07g062610.4 Solanum lycopersicum
Sopen01g050300 Solanum pennellii
Sopen07g030840 Solanum pennellii
Sp1g39860 Schrenkiella parvula
Sp3g13190 Schrenkiella parvula
Sp7g31750 Schrenkiella parvula
TAR627G0302 Trochodendron aralioides
TAR628G1712 Trochodendron aralioides
THA.LOC104807266 Tarenaya hassleriana
THA.LOC104810442 Tarenaya hassleriana
THA.LOC104810443 Tarenaya hassleriana
Thecc.02G101900 Theobroma cacao
Thecc.07G107100 Theobroma cacao
Thecc.07G107500 Theobroma cacao
Thecc.07G139800 Theobroma cacao
Thhalv10011492m.g Eutrema salsugineum
Thhalv10020891m.g Eutrema salsugineum
Thhalv10025121m.g Eutrema salsugineum
TPR.G12672 Trifolium pratense
TPR.G36281 Trifolium pratense
TPR.G9224 Trifolium pratense
TWI31G0180 Tripterygium wilfordii
TWI31G1435 Tripterygium wilfordii
TWI39G1118 Tripterygium wilfordii
unitig_0.g861 Utricularia gibba
unitig_699.g19235 Utricularia gibba
vmacro02040 Vaccinium macrocarpon
vmacro11920 Vaccinium macrocarpon
VMungo0251G1594 Vigna mungo
Zm00001eb037980 Zea mays
Zm00001eb119910 Zea mays
Zm00001eb383320 Zea mays

User provided reference genes

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