Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p01410 Brassica napus
A06p32140 Brassica napus
Aa31LG10G2160 Aethionema arabicum
Aa31LG1G16670 Aethionema arabicum
Aa31LG8G17720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2249 Anthoceros agrestis
Actinidia09863 Actinidia chinensis
Actinidia18759 Actinidia chinensis
Actinidia28848 Actinidia chinensis
Actinidia30835 Actinidia chinensis
Actinidia35257 Actinidia chinensis
Actinidia39309 Actinidia chinensis
Ah.04g165090 Amaranthus hybridus
AL1G61250 Arabidopsis lyrata
AL3G53880 Arabidopsis lyrata
AL8G42850 Arabidopsis lyrata
Aqoxy1G02563 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5GYD3M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MWP6KQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PL30YU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PRL389 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UL1LIT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UQC0E8 Arachis hypogaea
AT1G52920 Arabidopsis thaliana
AT2G20770 Arabidopsis thaliana
AT5G65280 Arabidopsis thaliana
ATR0680G213 Amborella trichopoda
ATR1133G026 Amborella trichopoda
ATR1133G050 Amborella trichopoda
Atru.chr2.1932 Acer truncatum
Atru.chr2.2742 Acer truncatum
Atru.chr3.1357 Acer truncatum
Atru.chr6.3009 Acer truncatum
AUR62003255 Chenopodium quinoa
AUR62027215 Chenopodium quinoa
AUR62029353 Chenopodium quinoa
AUR62034234 Chenopodium quinoa
BcaB07g33373 Brassica carinata
BcaC06g36768 Brassica carinata
BcaC08g43476 Brassica carinata
BolC3t18339H Brassica oleracea
BolC6t35941H Brassica oleracea
BolC7t40465H Brassica oleracea
BraA06t23362Z Brassica rapa
BraA06t26142Z Brassica rapa
BraA07t27790Z Brassica rapa
C03p60800 Brassica napus
C06p08620 Brassica napus
C07p00140 Brassica napus
CAN.G162.76 Capsicum annuum
CAN.G162.77 Capsicum annuum
CAN.G1655.6 Capsicum annuum
CAN.G905.23 Capsicum annuum
CANSAT01G1582 Cannabis sativa
CARHR043130 Cardamine hirsuta
CARHR111440 Cardamine hirsuta
CARHR279230 Cardamine hirsuta
Carub.0001s4207 Capsella rubella
Carub.0003s3534 Capsella rubella
Carub.0008s2616 Capsella rubella
Ca_01827_v3 Cicer arietinum L.
Ca_16512_v3 Cicer arietinum L.
Ca_26667_v3 Cicer arietinum L.
CBR_g29833 Chara braunii
Cc05_g06900 Coffea canephora
Cc05_g12360 Coffea canephora
Cc07_g14690 Coffea canephora
CDE03G0185 Ceratophyllum demersum
CDE06G0968 Ceratophyllum demersum
CDE10G0674 Ceratophyllum demersum
Cfa002604 Carpinus fangiana
Cfa014591 Carpinus fangiana
Cfa020547 Carpinus fangiana
Cfa022777 Carpinus fangiana
Ciclev10008488m.g Citrus clementina
Ciclev10025657m.g Citrus clementina
CiPaw.03G145200 Carya illinoinensis
CiPaw.03G175100 Carya illinoinensis
CiPaw.11G173300 Carya illinoinensis
ClCG07G017410 Citrullus lanatus
ClCG11G018210 Citrullus lanatus
COL.COLO4_06976 Corchorus olitorius
COL.COLO4_09437 Corchorus olitorius
COL.COLO4_27288 Corchorus olitorius
Cpa.g.sc34.140 Carica papaya
Cpa.g.sc55.79 Carica papaya
Cpa.g.sc80.30 Carica papaya
Cre03.g151250 Chlamydomonas reinhardtii
CsaV3_4G004640 Cucumis sativus L.
CsaV3_4G033860 Cucumis sativus L.
CsaV3_UNG129010 Cucumis sativus L.
CsaV3_UNG156170 Cucumis sativus L.
CsaV3_UNG223530 Cucumis sativus L.
CSS0003567 Camellia sinensis var. sinensis
CSS0036256 Camellia sinensis var. sinensis
CSS0044978 Camellia sinensis var. sinensis
DCAR_010098 Daucus carota
DCAR_012998 Daucus carota
DCAR_012999 Daucus carota
DCAR_014207 Daucus carota
DCAR_017160 Daucus carota
Dinv04323 Davidia involucrata
Dinv05102 Davidia involucrata
Dinv08854 Davidia involucrata
Dinv12919 Davidia involucrata
Dinv13226 Davidia involucrata
Duzib052G1053 Durio zibethinus
Duzib147G0852 Durio zibethinus
Duzib268G0581 Durio zibethinus
ECA233G3736 Erigeron canadensis
ECA238G2205 Erigeron canadensis
ECA246G1152 Erigeron canadensis
EL10Ac4g08119 Beta vulgaris
EL10Ac6g14821 Beta vulgaris
EL10Ac8g20406 Beta vulgaris
Eucgr.A01805 Eucalyptus grandis
Eucgr.F03336 Eucalyptus grandis
Eucgr.H04744 Eucalyptus grandis
FAN11G2505 Fragaria x ananassa
FAN16G3019 Fragaria x ananassa
FAN19G3041 Fragaria x ananassa
FAN21G3526 Fragaria x ananassa
FAN25G3814 Fragaria x ananassa
FAN26G0584 Fragaria x ananassa
FAN28G2966 Fragaria x ananassa
FvH4_1g20300 Fragaria vesca
FvH4_3g20590 Fragaria vesca
Glyma.11G241500 Glycine max
Glyma.12G111000 Glycine max
Glyma.12G222300 Glycine max
Glyma.13G279300 Glycine max
Glyma.18G015500 Glycine max
Gohir.A01G066000 Gossypium hirsutum
Gohir.A12G086600 Gossypium hirsutum
Gohir.A13G056100 Gossypium hirsutum
Gohir.D01G053300 Gossypium hirsutum
Gohir.D12G082600 Gossypium hirsutum
Gohir.D13G065900 Gossypium hirsutum
Gorai.008G090400 Gossypium raimondii
Gorai.013G075200 Gossypium raimondii
Gorai.N018400 Gossypium raimondii
GSVIVG01002388001 Vitis vinifera
GSVIVG01003420001 Vitis vinifera
GSVIVG01011327001 Vitis vinifera
GSVIVG01014387001 Vitis vinifera
GSVIVG01030376001 Vitis vinifera
HanXRQChr05g0156751 Helianthus annuus
HanXRQChr14g0445071 Helianthus annuus
Haze_09474 Corylus avellana
Haze_09478 Corylus avellana
Haze_13142 Corylus avellana
Haze_24858 Corylus avellana
Haze_26950 Corylus avellana
Hma1.2p1_0148F.1_g066220 Hydrangea macrophylla
Hund02221 Selenicereus undatus
Hund07975 Selenicereus undatus
Hund14105 Selenicereus undatus
Hund22951 Selenicereus undatus
Lalb_Chr01g0005331 Lupinus albus
Lalb_Chr08g0230981 Lupinus albus
Lalb_Chr20g0109731 Lupinus albus
Lj1C726T7 Lonicera japonica
Lj3g0010681 Lotus japonicus
Lj3g0023790 Lotus japonicus
Lj3g0027966 Lotus japonicus
Lj4C898T13 Lonicera japonica
Lj6g0017597 Lotus japonicus
Lj8A158T78 Lonicera japonica
Lsat_1_v5_gn_1_44300 Lactuca sativa
Lsat_1_v5_gn_2_11441 Lactuca sativa
Lsat_1_v5_gn_2_66100 Lactuca sativa
Lsat_1_v5_gn_3_39120 Lactuca sativa
Lsat_1_v5_gn_5_6601 Lactuca sativa
Lsat_1_v5_gn_8_132741 Lactuca sativa
Lsat_1_v5_gn_9_32901 Lactuca sativa
Manes.03G113200 Manihot esculenta
Manes.13G096400 Manihot esculenta
Manes.13G147800 Manihot esculenta
Mapoly0079s0061 Marchantia polymorpha
MBI05_g05606_MAGBIO Magnolia biondii
MBI18_g17016_MAGBIO Magnolia biondii
MD01G1035100 Malus domestica
MD03G1223900 Malus domestica
MD09G1251300 Malus domestica
MD15G1320800 Malus domestica
Medtr0040s0150 Medicago truncatula
Medtr2g079700 Medicago truncatula
Medtr3g086910 Medicago truncatula
Medtr6g007490 Medicago truncatula
MELO3C016713.2 Cucumis melo
MELO3C017600.2 Cucumis melo
MELO3C032618.2 Cucumis melo
Migut.H01071 Erythranthe guttata
Migut.H01923 Erythranthe guttata
Migut.H02339 Erythranthe guttata
MSTRG.12312 Avicennia marina
MSTRG.12918 Avicennia marina
MSTRG.2581 Avicennia marina
Nitab4.5_0000635g0030 Nicotiana tabacum
Nitab4.5_0000743g0020 Nicotiana tabacum
Nitab4.5_0000998g0080 Nicotiana tabacum
Nitab4.5_0003769g0060 Nicotiana tabacum
Nitab4.5_0003769g0090 Nicotiana tabacum
Nitab4.5_0007096g0040 Nicotiana tabacum
Nitab4.5_0009340g0030 Nicotiana tabacum
Nn1g04008 Nelumbo nucifera
Nn1g06617 Nelumbo nucifera
Nn2g12450 Nelumbo nucifera
Nn4g22703 Nelumbo nucifera
Nn5g30017 Nelumbo nucifera
Nn5g30101 Nelumbo nucifera
Nn5g30103 Nelumbo nucifera
Oeu015884.1 Olea europaea
Oeu019345.1 Olea europaea
Oeu048159.2 Olea europaea
Oeu059282.1 Olea europaea
Os04g0529600 Oryza sativa ssp. japonica
Os10g0497900 Oryza sativa ssp. japonica
Peaxi162Scf00206g00036 Petunia axillaris
Peaxi162Scf00383g00920 Petunia axillaris
Peaxi162Scf00998g00028 Petunia axillaris
PGR031G3560 Punica granatum
PGR042G3131 Punica granatum
PGR102G3139 Punica granatum
PGSC0003DMG400012426 Solanum tuberosum
PGSC0003DMG400016155 Solanum tuberosum
PGSC0003DMG401021681 Solanum tuberosum
Phvul.001G253500 Phaseolus vulgaris
Phvul.005G083500 Phaseolus vulgaris
Phvul.011G117700 Phaseolus vulgaris
Potri.001G403200 Populus trichocarpa
Potri.005G072500 Populus trichocarpa
Potri.007G096500 Populus trichocarpa
Potri.011G122300 Populus trichocarpa
Potri.013G134700 Populus trichocarpa
Pp3c18_18390 Physcomitrium patens
Pp3c2_20130 Physcomitrium patens
Pp3c9_3820 Physcomitrium patens
Prupe.3G156300 Prunus persica
Prupe.4G185600 Prunus persica
Prupe.6G192300 Prunus persica
Psat5g090800 Pisum sativum
Psat5g245280 Pisum sativum
Psat7g151520 Pisum sativum
PSO081G0151 Papaver somniferum
PSO210G5874 Papaver somniferum
PSO447G0014 Papaver somniferum
PSO700G0035 Papaver somniferum
QL06p048213 Quercus lobata
QL08p019743 Quercus lobata
QL08p038324 Quercus lobata
QL08p038350 Quercus lobata
RcHm_v2.0_Chr2g0112441 Rosa chinensis
RcHm_v2.0_Chr5g0034611 Rosa chinensis
Rhsim04G0019600 Rhododendron simsii
Rhsim04G0067400 Rhododendron simsii
Rhsim06G0146600 Rhododendron simsii
Rhsim06G0146700 Rhododendron simsii
Rhsim08G0013100 Rhododendron simsii
Sabra05G0059300 Salix brachista
Sabra07G0079700 Salix brachista
Sabra07G0079800 Salix brachista
Sabra13G0114300 Salix brachista
Sabra16G0264900 Salix brachista
SalBow1G5851 Salvia bowleyana
SalBow3G1644 Salvia bowleyana
SalBow3G2427 Salvia bowleyana
SalBow7G2671 Salvia bowleyana
Sc03g0009780 Simmondsia chinensis
Sc03g0009850 Simmondsia chinensis
Sc07g0007320 Simmondsia chinensis
Sed0005204 Sechium edule
Sed0007915 Sechium edule
Sed0018738 Sechium edule
SEGI_05805 Sequoiadendron giganteum
SEGI_12395 Sequoiadendron giganteum
SEGI_21859 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30888 Striga asiatica
SGA_v2.0_scaffold4G02197 Striga asiatica
SHI24891 Sapria himalayana
SMO347G0452 Selaginella moellendorffii
Solyc07g063310.3 Solanum lycopersicum
Solyc07g063320.3 Solanum lycopersicum
Solyc10g008460.3 Solanum lycopersicum
Solyc11g010170.2 Solanum lycopersicum
Sopen07g031480 Solanum pennellii
Sopen07g031490 Solanum pennellii
Sopen10g004280 Solanum pennellii
Sopen11g004950 Solanum pennellii
Sp1g39490 Schrenkiella parvula
Sp2g28390 Schrenkiella parvula
Sp3g34020 Schrenkiella parvula
TAR381G0216 Trochodendron aralioides
TAR627G1082 Trochodendron aralioides
TAR627G1151 Trochodendron aralioides
THA.LOC104798840 Tarenaya hassleriana
THA.LOC104815548 Tarenaya hassleriana
THA.LOC104824707 Tarenaya hassleriana
THA.LOC104824709 Tarenaya hassleriana
Thecc.01G096400 Theobroma cacao
Thecc.02G177400 Theobroma cacao
Thecc.07G076800 Theobroma cacao
Thhalv10002001m.g Eutrema salsugineum
Thhalv10004256m.g Eutrema salsugineum
Thhalv10011533m.g Eutrema salsugineum
TPR.G11002 Trifolium pratense
TPR.G16005 Trifolium pratense
TPR.G21776 Trifolium pratense
TPR.G38986 Trifolium pratense
TWI18G0534 Tripterygium wilfordii
TWI39G0372 Tripterygium wilfordii
TWI74G1654 Tripterygium wilfordii
TWI77G1022 Tripterygium wilfordii
unitig_26.g9536 Utricularia gibba
vmacro09275 Vaccinium macrocarpon
vmacro09543 Vaccinium macrocarpon
vmacro12284 Vaccinium macrocarpon
vmacro18581 Vaccinium macrocarpon
VMungo0251G1813 Vigna mungo
VMungo1080G1055 Vigna mungo
VMungo1080G1090 Vigna mungo
VMungo1127G0324 Vigna mungo
VMungo1383G1068 Vigna mungo
Zm00001eb044620 Zea mays

User provided reference genes

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