Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17490 Brassica napus
A03p24240 Brassica napus
A04p32710 Brassica napus
A05p14250 Brassica napus
A05p38390 Brassica napus
A09p67120 Brassica napus
Aa31LG1G25180 Aethionema arabicum
Aa31LG3G3840 Aethionema arabicum
Aa31LG5G5600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1559 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1580 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1644 Anthoceros agrestis
Actinidia01014 Actinidia chinensis
Actinidia07779 Actinidia chinensis
Actinidia11293 Actinidia chinensis
Actinidia26502 Actinidia chinensis
Ah.10g029630 Amaranthus hybridus
Ah.13g073770 Amaranthus hybridus
AL1G16070 Arabidopsis lyrata
AL3G22370 Arabidopsis lyrata
AL4G26590 Arabidopsis lyrata
AL4G42170 Arabidopsis lyrata
Aqoxy2G04133 Aquilegia oxysepala
Aqoxy4G03308 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.10EZJ8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2X8VUU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7XZ4E2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GWX7Z5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J488YR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PFJT78 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RYRE4P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZK1PAR Arachis hypogaea
AT1G06130 Arabidopsis thaliana
AT2G31350 Arabidopsis thaliana
AT2G43430 Arabidopsis thaliana
AT3G10850 Arabidopsis thaliana
ATR0743G260 Amborella trichopoda
ATR1127G175 Amborella trichopoda
Atru.chr12.212 Acer truncatum
Atru.chr4.1264 Acer truncatum
AUR62002351 Chenopodium quinoa
AUR62023835 Chenopodium quinoa
AUR62031661 Chenopodium quinoa
AUR62032547 Chenopodium quinoa
BcaB01g03383 Brassica carinata
BcaB01g04048 Brassica carinata
BcaB02g08939 Brassica carinata
BcaB06g25651 Brassica carinata
BcaB06g29314 Brassica carinata
BcaC01g05234 Brassica carinata
BcaC01g05957 Brassica carinata
BcaC01g05958 Brassica carinata
BcaC02g07179 Brassica carinata
BcaC02g07977 Brassica carinata
BcaC02g11233 Brassica carinata
BcaC02g12394 Brassica carinata
BcaC07g42084 Brassica carinata
BolC3t14458H Brassica oleracea
BolC3t15247H Brassica oleracea
BolC4t22079H Brassica oleracea
BolC4t23429H Brassica oleracea
BolC4t27604H Brassica oleracea
BolC4t28546H Brassica oleracea
BolC8t52666H Brassica oleracea
BraA03t11021Z Brassica rapa
BraA03t11633Z Brassica rapa
BraA04t18734Z Brassica rapa
BraA05t19363Z Brassica rapa
BraA05t20356Z Brassica rapa
BraA05t22630Z Brassica rapa
BraA09t42045Z Brassica rapa
C03p20660 Brassica napus
C03p28910 Brassica napus
C04p18990 Brassica napus
C04p61180 Brassica napus
C04p70420 Brassica napus
C05p57290 Brassica napus
C08p51400 Brassica napus
CAN.G17.20 Capsicum annuum
CAN.G540.7 Capsicum annuum
CANSAT56G3309 Cannabis sativa
CANSAT78G0555 Cannabis sativa
CARHR005630 Cardamine hirsuta
CARHR085420 Cardamine hirsuta
CARHR124980 Cardamine hirsuta
CARHR138520 Cardamine hirsuta
Carub.0001s0545 Capsella rubella
Carub.0003s1009 Capsella rubella
Carub.0004s1267 Capsella rubella
Carub.0004s2590 Capsella rubella
Ca_01249_v3 Cicer arietinum L.
Ca_05524_v3 Cicer arietinum L.
Ca_20801_v3 Cicer arietinum L.
Ca_29313_v3 Cicer arietinum L.
Ca_29718_v3 Cicer arietinum L.
CBR_g51006 Chara braunii
Cc02_g05090 Coffea canephora
Cc02_g05100 Coffea canephora
Cc03_g12120 Coffea canephora
CDE04G0806 Ceratophyllum demersum
CDE08G1381 Ceratophyllum demersum
Cfa001187 Carpinus fangiana
Cfa025793 Carpinus fangiana
Ciclev10021094m.g Citrus clementina
Ciclev10032268m.g Citrus clementina
CiPaw.01G096000 Carya illinoinensis
CiPaw.01G308000 Carya illinoinensis
CiPaw.02G051900 Carya illinoinensis
ClCG07G005310 Citrullus lanatus
ClCG07G011760 Citrullus lanatus
COL.COLO4_08223 Corchorus olitorius
COL.COLO4_19489 Corchorus olitorius
Cpa.g.sc19.34 Carica papaya
Cpa.g.sc9.318 Carica papaya
Cre06.g276350 Chlamydomonas reinhardtii
Cre06.g276450 Chlamydomonas reinhardtii
Cre12.g557700 Chlamydomonas reinhardtii
Cre12.g557850 Chlamydomonas reinhardtii
CsaV3_4G002450 Cucumis sativus L.
CsaV3_5G011130 Cucumis sativus L.
CSS0009301 Camellia sinensis var. sinensis
CSS0009745 Camellia sinensis var. sinensis
CSS0009991 Camellia sinensis var. sinensis
CSS0033401 Camellia sinensis var. sinensis
DCAR_014658 Daucus carota
Dinv05082 Davidia involucrata
Dinv34509 Davidia involucrata
Dinv44157 Davidia involucrata
Duzib114G0841 Durio zibethinus
Duzib151G0367 Durio zibethinus
Duzib212G0238 Durio zibethinus
ECA240G1523 Erigeron canadensis
EL10Ac2g02685 Beta vulgaris
EL10Ac3g06013 Beta vulgaris
FAN01G0302 Fragaria x ananassa
FAN06G1898 Fragaria x ananassa
FAN10G1510 Fragaria x ananassa
FAN11G2381 Fragaria x ananassa
FAN16G3545 Fragaria x ananassa
FAN21G1842 Fragaria x ananassa
FAN25G1970 Fragaria x ananassa
FvH4_3g41770 Fragaria vesca
FvH4_7g26250 Fragaria vesca
Glyma.02G220100 Glycine max
Glyma.04G224100 Glycine max
Glyma.06G140800 Glycine max
Glyma.11G126200 Glycine max
Glyma.12G050800 Glycine max
Glyma.13G345400 Glycine max
Glyma.14G187700 Glycine max
Glyma.15G028900 Glycine max
Gohir.A02G011300 Gossypium hirsutum
Gohir.A05G404800 Gossypium hirsutum
Gohir.A09G212200 Gossypium hirsutum
Gohir.A10G140100 Gossypium hirsutum
Gohir.A11G124800 Gossypium hirsutum
Gohir.D02G012100 Gossypium hirsutum
Gohir.D04G010900 Gossypium hirsutum
Gohir.D09G205700 Gossypium hirsutum
Gohir.D10G126700 Gossypium hirsutum
Gorai.005G015500 Gossypium raimondii
Gorai.006G229600 Gossypium raimondii
Gorai.011G139600 Gossypium raimondii
Gorai.012G013100 Gossypium raimondii
GSVIVG01010845001 Vitis vinifera
GSVIVG01032864001 Vitis vinifera
HanXRQChr03g0089271 Helianthus annuus
HanXRQChr13g0419841 Helianthus annuus
HanXRQChr14g0460961 Helianthus annuus
Haze_01455 Corylus avellana
Haze_17378 Corylus avellana
Haze_26804 Corylus avellana
Haze_27434 Corylus avellana
Hma1.2p1_1466F.1_g285440 Hydrangea macrophylla
Hma1.2p1_3340F.1_g335380 Hydrangea macrophylla
Hma1.2p1_3340F.1_g335390 Hydrangea macrophylla
HPP92_009005 Vanilla planifolia
HPP92_011696 Vanilla planifolia
HPP92_013543 Vanilla planifolia
HPP92_013567 Vanilla planifolia
Hund03177 Selenicereus undatus
Hund12404 Selenicereus undatus
Hund13403 Selenicereus undatus
Hund13430 Selenicereus undatus
Lalb_Chr07g0192821 Lupinus albus
Lalb_Chr11g0067631 Lupinus albus
Lalb_Chr24g0396751 Lupinus albus
Lj3A34G38 Lonicera japonica
Lj3C34G11 Lonicera japonica
Lj3g0013678 Lotus japonicus
Lj3g0017638 Lotus japonicus
Lj6C107G6 Lonicera japonica
Lj8A51T70 Lonicera japonica
LjContig00155g0016618 Lotus japonicus
Lsat_1_v5_gn_2_127360 Lactuca sativa
Lsat_1_v5_gn_3_109941 Lactuca sativa
Manes.04G038500 Manihot esculenta
Manes.07G141600 Manihot esculenta
Manes.11G125200 Manihot esculenta
Mapoly0007s0214 Marchantia polymorpha
Mapoly0204s0005 Marchantia polymorpha
Mapoly0204s0009 Marchantia polymorpha
MBI03_g02710_MAGBIO Magnolia biondii
MBI11_g16044_MAGBIO Magnolia biondii
MCO15G269 Micromonas commoda
MCO16G213 Micromonas commoda
MD01G1171200 Malus domestica
MD04G1045200 Malus domestica
Medtr2g099090 Medicago truncatula
Medtr4g068100 Medicago truncatula
Medtr5g068440 Medicago truncatula
MELO3C017798.2 Cucumis melo
MELO3C020172.2 Cucumis melo
Migut.F01225 Erythranthe guttata
Migut.G01317 Erythranthe guttata
MSTRG.4285 Avicennia marina
MSTRG.8388 Avicennia marina
MSTRG.9750 Avicennia marina
Nitab4.5_0001586g0150 Nicotiana tabacum
Nitab4.5_0005479g0020 Nicotiana tabacum
Nitab4.5_0006064g0030 Nicotiana tabacum
Nitab4.5_0023080g0010 Nicotiana tabacum
Nn1g09581 Nelumbo nucifera
Nn5g26792 Nelumbo nucifera
Oeu020495.1 Olea europaea
Oeu024472.1 Olea europaea
Oeu024475.1 Olea europaea
Oeu031396.1 Olea europaea
Oeu034444.1 Olea europaea
Oeu064771.1 Olea europaea
Oeu064772.1 Olea europaea
Oeu064774.1 Olea europaea
Os03g0332400 Oryza sativa ssp. japonica
Os09g0516600 Oryza sativa ssp. japonica
Peaxi162Scf00180g00311 Petunia axillaris
Peaxi162Scf00304g00832 Petunia axillaris
PGR044G0421 Punica granatum
PGR083G0446 Punica granatum
PGSC0003DMG400027594 Solanum tuberosum
Phvul.005G154100 Phaseolus vulgaris
Phvul.008G187100 Phaseolus vulgaris
Phvul.009G042000 Phaseolus vulgaris
Phvul.011G053100 Phaseolus vulgaris
Potri.007G131300 Populus trichocarpa
Potri.017G026500 Populus trichocarpa
Potri.019G062600 Populus trichocarpa
Pp3c3_9810 Physcomitrium patens
Pp3c8_15440 Physcomitrium patens
PRCOL_00004659 Prasinoderma coloniale
PRCOL_00006080 Prasinoderma coloniale
Prupe.1G198300 Prunus persica
Prupe.2G266700 Prunus persica
Psat2g062440 Pisum sativum
Psat5g289720 Pisum sativum
Psat7g209200 Pisum sativum
PSO017G5589 Papaver somniferum
PSO017G6715 Papaver somniferum
PSO675G9187 Papaver somniferum
QL08p065179 Quercus lobata
QL10p050921 Quercus lobata
RcHm_v2.0_Chr1g0372701 Rosa chinensis
RcHm_v2.0_Chr5g0074861 Rosa chinensis
RcHm_v2.0_Chr6g0255691 Rosa chinensis
RcHm_v2.0_Chr6g0266531 Rosa chinensis
Rhsim02G0082500 Rhododendron simsii
Rhsim09G0186800 Rhododendron simsii
Sabra07G0106600 Salix brachista
Sabra17G0016200 Salix brachista
Sabra19G0071500 Salix brachista
Sabra19G0075900 Salix brachista
Sabra19G0080900 Salix brachista
SalBow2G0541 Salvia bowleyana
SalBow3G0044 Salvia bowleyana
Sc11g0006080 Simmondsia chinensis
Sc19g0002830 Simmondsia chinensis
Sed0004462 Sechium edule
Sed0013571 Sechium edule
Sed0019662 Sechium edule
SEGI_02077 Sequoiadendron giganteum
SEGI_08969 Sequoiadendron giganteum
SEGI_22633 Sequoiadendron giganteum
SGA_v2.0_scaffold160G37761 Striga asiatica
SGA_v2.0_scaffold17G08161 Striga asiatica
SHI29109 Sapria himalayana
SHI29253 Sapria himalayana
SHI37397 Sapria himalayana
SMO144G0148 Selaginella moellendorffii
SMO367G1031 Selaginella moellendorffii
Solyc06g048530.4 Solanum lycopersicum
Solyc06g053310.3 Solanum lycopersicum
Sopen06g014700 Solanum pennellii
Sopen06g018370 Solanum pennellii
Sp1g04920 Schrenkiella parvula
Sp3g09170 Schrenkiella parvula
Sp4g13830 Schrenkiella parvula
Sp4g25530 Schrenkiella parvula
TAR362G0599 Trochodendron aralioides
TAR633G1645 Trochodendron aralioides
TAR633G2249 Trochodendron aralioides
TAR636G2862 Trochodendron aralioides
TAR636G3606 Trochodendron aralioides
THA.LOC104802317 Tarenaya hassleriana
THA.LOC104803823 Tarenaya hassleriana
THA.LOC104826196 Tarenaya hassleriana
THA.LOC104826876 Tarenaya hassleriana
Thecc.04G174400 Theobroma cacao
Thecc.10G186600 Theobroma cacao
Thhalv10001542m.g Eutrema salsugineum
Thhalv10016918m.g Eutrema salsugineum
Thhalv10021361m.g Eutrema salsugineum
TPR.G18862 Trifolium pratense
TPR.G33926 Trifolium pratense
TPR.G34225 Trifolium pratense
TWI09G0016 Tripterygium wilfordii
TWI15G0647 Tripterygium wilfordii
TWI38G1209 Tripterygium wilfordii
unitig_90.g27550 Utricularia gibba
unitig_92.g28203 Utricularia gibba
vmacro09949 Vaccinium macrocarpon
VMungo0647G2425 Vigna mungo
VMungo1080G1782 Vigna mungo
VMungo1127G1149 Vigna mungo
VMungo1309G1205 Vigna mungo
Zm00001eb015860 Zea mays
Zm00001eb318710 Zea mays

User provided reference genes

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