Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16110 Brassica napus
A03p55550 Brassica napus
A06p27580 Brassica napus
A06p29920 Brassica napus
A07p14200 Brassica napus
A09p42000 Brassica napus
A10p04330 Brassica napus
Aa31LG1G18780 Aethionema arabicum
Aa31LG7G11040 Aethionema arabicum
Aa31LG7G6680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2812 Anthoceros agrestis
Actinidia15621 Actinidia chinensis
Actinidia16201 Actinidia chinensis
Actinidia17756 Actinidia chinensis
Actinidia19374 Actinidia chinensis
Actinidia36774 Actinidia chinensis
Actinidia36775 Actinidia chinensis
Ah.08g218320 Amaranthus hybridus
Ah.16g108340 Amaranthus hybridus
Ah.16g108350 Amaranthus hybridus
Ah.16g108880 Amaranthus hybridus
Ah.16g108920 Amaranthus hybridus
AL1G36270 Arabidopsis lyrata
AL5G27790 Arabidopsis lyrata
AL7G28390 Arabidopsis lyrata
AL8G40280 Arabidopsis lyrata
Aqoxy5G03621 Aquilegia oxysepala
Aqoxy6G00457 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MT8Q6Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VJWP7R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VT5KNJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZSL9VF Arachis hypogaea
AT1G22730 Arabidopsis thaliana
AT3G48390 Arabidopsis thaliana
AT4G24800 Arabidopsis thaliana
AT5G63190 Arabidopsis thaliana
ATR0824G002 Amborella trichopoda
ATR1120G048 Amborella trichopoda
ATR1120G069 Amborella trichopoda
Atru.chr13.1969 Acer truncatum
Atru.chr9.987 Acer truncatum
AUR62001259 Chenopodium quinoa
AUR62025749 Chenopodium quinoa
AUR62026607 Chenopodium quinoa
AUR62034927 Chenopodium quinoa
BcaB02g06755 Brassica carinata
BcaB03g14184 Brassica carinata
BcaB08g34513 Brassica carinata
BcaB08g34514 Brassica carinata
BcaC01g02339 Brassica carinata
BcaC01g02565 Brassica carinata
BcaC05g24649 Brassica carinata
BcaC06g32857 Brassica carinata
BcaC06g34992 Brassica carinata
BcaC06g34993 Brassica carinata
BcaC06g34994 Brassica carinata
BcaC06g34995 Brassica carinata
BcaC09g50831 Brassica carinata
BolC1t01939H Brassica oleracea
BolC3t18596H Brassica oleracea
BolC3t18916H Brassica oleracea
BolC5t29194H Brassica oleracea
BolC5t29266H Brassica oleracea
BolC5t30879H Brassica oleracea
BolC7t42622H Brassica oleracea
BolC7t42623H Brassica oleracea
BraA01t01547Z Brassica rapa
BraA06t25943Z Brassica rapa
BraA07t29178Z Brassica rapa
BraA09t39687Z Brassica rapa
BraA10t42700Z Brassica rapa
C01p20100 Brassica napus
C03p63440 Brassica napus
C03p66430 Brassica napus
C05p04190 Brassica napus
C05p04940 Brassica napus
C05p21860 Brassica napus
C07p20900 Brassica napus
C07p20910 Brassica napus
CAN.G32873.1 Capsicum annuum
CAN.G472.47 Capsicum annuum
CAN.G472.48 Capsicum annuum
CAN.G513.2 Capsicum annuum
CAN.G564.31 Capsicum annuum
CANSAT80G1622 Cannabis sativa
CARHR023090 Cardamine hirsuta
CARHR043640 Cardamine hirsuta
CARHR232190 Cardamine hirsuta
CARHR277040 Cardamine hirsuta
CARHR277050 Cardamine hirsuta
Carub.0001s2224 Capsella rubella
Carub.0005s1455 Capsella rubella
Carub.0007s1626 Capsella rubella
Carub.0008s2395 Capsella rubella
Ca_04655_v3 Cicer arietinum L.
Ca_26533_v3 Cicer arietinum L.
CBR_g226 Chara braunii
Cc04_g10670 Coffea canephora
Cc10_g06380 Coffea canephora
CDE06G2849 Ceratophyllum demersum
CDE08G1577 Ceratophyllum demersum
Cfa018905 Carpinus fangiana
Ciclev10000417m.g Citrus clementina
Ciclev10019069m.g Citrus clementina
CiPaw.11G013500 Carya illinoinensis
CiPaw.12G034300 Carya illinoinensis
CiPaw.16G007000 Carya illinoinensis
ClCG03G003370 Citrullus lanatus
COL.COLO4_04550 Corchorus olitorius
COL.COLO4_13721 Corchorus olitorius
Cpa.g.sc26.125 Carica papaya
Cpa.g.sc4.43 Carica papaya
Cre09.g415800 Chlamydomonas reinhardtii
CsaV3_1G009180 Cucumis sativus L.
CSS0003328 Camellia sinensis var. sinensis
CSS0005431 Camellia sinensis var. sinensis
CSS0016266 Camellia sinensis var. sinensis
CSS0047587 Camellia sinensis var. sinensis
DCAR_000066 Daucus carota
DCAR_006532 Daucus carota
DCAR_016427 Daucus carota
DCAR_021601 Daucus carota
Dinv04052 Davidia involucrata
Dinv11068 Davidia involucrata
Dinv11119 Davidia involucrata
Dinv13099 Davidia involucrata
Dinv38487 Davidia involucrata
Dinv38488 Davidia involucrata
Dinv41019 Davidia involucrata
Duzib068G1401 Durio zibethinus
Duzib093G1604 Durio zibethinus
Duzib116G0017 Durio zibethinus
Duzib205G1068 Durio zibethinus
ECA246G0233 Erigeron canadensis
ECA247G3869 Erigeron canadensis
EL10Ac1g01636 Beta vulgaris
EL10Ac7g18050 Beta vulgaris
Eucgr.K02766 Eucalyptus grandis
FAN04G2248 Fragaria x ananassa
FAN08G0079 Fragaria x ananassa
FAN08G0552 Fragaria x ananassa
FAN13G0524 Fragaria x ananassa
FAN13G0775 Fragaria x ananassa
FAN13G1060 Fragaria x ananassa
FAN15G1659 Fragaria x ananassa
FAN18G4283 Fragaria x ananassa
FAN24G2960 Fragaria x ananassa
FAN27G2770 Fragaria x ananassa
FvH4_2g12790 Fragaria vesca
FvH4_5g07020 Fragaria vesca
FvH4_5g07111 Fragaria vesca
FvH4_5g07120 Fragaria vesca
FvH4_5g30372 Fragaria vesca
Glyma.02G077200 Glycine max
Glyma.04G191500 Glycine max
Glyma.05G044200 Glycine max
Glyma.16G160000 Glycine max
Glyma.17G126700 Glycine max
Gohir.A02G061900 Gossypium hirsutum
Gohir.A03G063000 Gossypium hirsutum
Gohir.A07G054100 Gossypium hirsutum
Gohir.D02G067500 Gossypium hirsutum
Gohir.D03G103300 Gossypium hirsutum
Gohir.D07G058500 Gossypium hirsutum
Gorai.001G062000 Gossypium raimondii
Gorai.003G108800 Gossypium raimondii
Gorai.005G076400 Gossypium raimondii
GSVIVG01007575001 Vitis vinifera
GSVIVG01013677001 Vitis vinifera
HanXRQChr02g0041261 Helianthus annuus
HanXRQChr05g0156131 Helianthus annuus
HanXRQChr05g0158441 Helianthus annuus
HanXRQChr10g0299901 Helianthus annuus
Haze_07290 Corylus avellana
Hma1.2p1_0014F.1_g009970 Hydrangea macrophylla
Hma1.2p1_0276F.1_g110990 Hydrangea macrophylla
HPP92_006210 Vanilla planifolia
HPP92_022765 Vanilla planifolia
HPP92_022766 Vanilla planifolia
Hund18530 Selenicereus undatus
Lalb_Chr03g0035751 Lupinus albus
Lalb_Chr12g0202051 Lupinus albus
Lalb_Chr19g0129951 Lupinus albus
Lj2g0001655 Lotus japonicus
Lj4g0014559 Lotus japonicus
Lj4P705T38 Lonicera japonica
Lj5A101G108 Lonicera japonica
Lj9A473G60 Lonicera japonica
Lsat_1_v5_gn_1_5900 Lactuca sativa
Lsat_1_v5_gn_5_13080 Lactuca sativa
Manes.02G185900 Manihot esculenta
Manes.06G113600 Manihot esculenta
Manes.14G056036 Manihot esculenta
Mapoly0006s0227 Marchantia polymorpha
MBI08_g31847_MAGBIO Magnolia biondii
MCO05G051 Micromonas commoda
MD05G1036500 Malus domestica
MD06G1160300 Malus domestica
MD10G1038400 Malus domestica
MD10G1038500 Malus domestica
MD14G1166300 Malus domestica
Medtr4g104360 Medicago truncatula
Medtr6g034560 Medicago truncatula
MELO3C002324.2 Cucumis melo
Migut.D02040 Erythranthe guttata
Migut.N02938 Erythranthe guttata
Migut.O00223 Erythranthe guttata
MSTRG.11517 Avicennia marina
MSTRG.23188 Avicennia marina
Nitab4.5_0000071g0050 Nicotiana tabacum
Nitab4.5_0000433g0020 Nicotiana tabacum
Nitab4.5_0001000g0090 Nicotiana tabacum
Nitab4.5_0001000g0110 Nicotiana tabacum
Nitab4.5_0001000g0140 Nicotiana tabacum
Nitab4.5_0001231g0110 Nicotiana tabacum
Nitab4.5_0001360g0090 Nicotiana tabacum
Nitab4.5_0002531g0080 Nicotiana tabacum
Nitab4.5_0002531g0120 Nicotiana tabacum
Nn1g05162 Nelumbo nucifera
Nn4g22509 Nelumbo nucifera
Oeu011588.1 Olea europaea
Oeu023469.1 Olea europaea
Oeu045489.1 Olea europaea
Oeu046079.2 Olea europaea
Oeu049133.1 Olea europaea
Oeu053503.1 Olea europaea
Os03g0222100 Oryza sativa ssp. japonica
Os04g0482800 Oryza sativa ssp. japonica
Os08g0120500 Oryza sativa ssp. japonica
Peaxi162Scf00089g00936 Petunia axillaris
Peaxi162Scf00226g00218 Petunia axillaris
PGR042G1471 Punica granatum
PGR044G0305 Punica granatum
PGSC0003DMG400031138 Solanum tuberosum
Phvul.003G207600 Phaseolus vulgaris
Phvul.004G088100 Phaseolus vulgaris
Potri.002G061800 Populus trichocarpa
Potri.005G199200 Populus trichocarpa
Potri.012G091900 Populus trichocarpa
Potri.015G088300 Populus trichocarpa
Pp3c16_12950 Physcomitrium patens
Pp3c27_6350 Physcomitrium patens
Pp3c5_1690 Physcomitrium patens
PRCOL_00004352 Prasinoderma coloniale
PRCOL_00006541 Prasinoderma coloniale
Prupe.5G160100 Prunus persica
Prupe.8G044800 Prunus persica
Psat0s2687g0160 Pisum sativum
Psat3g012360 Pisum sativum
Psat3g012400 Pisum sativum
Psat4g065880 Pisum sativum
PSO063G6142 Papaver somniferum
PSO541G3632 Papaver somniferum
PSO675G6015 Papaver somniferum
PSO782G1163 Papaver somniferum
QL02p036349 Quercus lobata
QL02p036775 Quercus lobata
QL10p005613 Quercus lobata
RcHm_v2.0_Chr6g0273671 Rosa chinensis
RcHm_v2.0_Chr7g0191511 Rosa chinensis
RcHm_v2.0_Chr7g0191521 Rosa chinensis
RcHm_v2.0_Chr7g0191601 Rosa chinensis
RcHm_v2.0_Chr7g0191611 Rosa chinensis
RcHm_v2.0_Chr7g0191661 Rosa chinensis
RcHm_v2.0_Chr7g0215421 Rosa chinensis
RcHm_v2.0_Chr7g0215441 Rosa chinensis
Rhsim06G0093800 Rhododendron simsii
Rhsim08G0183000 Rhododendron simsii
Sabra02G0050000 Salix brachista
Sabra05G0151700 Salix brachista
Sabra12G0066600 Salix brachista
Sabra15G0111300 Salix brachista
SalBow6G2674 Salvia bowleyana
Sc02g0003730 Simmondsia chinensis
Sc04g0001040 Simmondsia chinensis
Sc22g0003920 Simmondsia chinensis
Sc22g0003930 Simmondsia chinensis
Sed0021106 Sechium edule
Sed0025036 Sechium edule
SEGI_10543 Sequoiadendron giganteum
SEGI_22873 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10787 Striga asiatica
SGA_v2.0_scaffold371G50148 Striga asiatica
SHI17333 Sapria himalayana
SMO164G0061 Selaginella moellendorffii
SMO356G0571 Selaginella moellendorffii
Solyc03g111630.4 Solanum lycopersicum
Solyc03g111640.4 Solanum lycopersicum
Solyc04g072130.2 Solanum lycopersicum
Sopen03g030750 Solanum pennellii
Sopen03g030760 Solanum pennellii
Sopen04g028300 Solanum pennellii
Sp1g20240 Schrenkiella parvula
Sp5g13660 Schrenkiella parvula
Sp7g22780 Schrenkiella parvula
TAR381G0442 Trochodendron aralioides
TAR381G0915 Trochodendron aralioides
TAR622G0169 Trochodendron aralioides
TAR629G0161 Trochodendron aralioides
THA.LOC104809746 Tarenaya hassleriana
THA.LOC104810249 Tarenaya hassleriana
THA.LOC104818201 Tarenaya hassleriana
THA.LOC104825001 Tarenaya hassleriana
Thecc.03G120700 Theobroma cacao
Thecc.09G171100 Theobroma cacao
Thhalv10003735m.g Eutrema salsugineum
Thhalv10006903m.g Eutrema salsugineum
Thhalv10024556m.g Eutrema salsugineum
TPR.G16199 Trifolium pratense
TPR.G37510 Trifolium pratense
TPR.G37517 Trifolium pratense
TWI09G0592 Tripterygium wilfordii
TWI14G0866 Tripterygium wilfordii
TWI39G0160 Tripterygium wilfordii
TWI63G1423 Tripterygium wilfordii
unitig_21.g20594 Utricularia gibba
unitig_21.g20595 Utricularia gibba
unitig_26.g9611 Utricularia gibba
vmacro19256 Vaccinium macrocarpon
vmacro19722 Vaccinium macrocarpon
VMungo0464G0258 Vigna mungo
VMungo1215G0408 Vigna mungo
Zm00001eb008970 Zea mays
Zm00001eb079330 Zea mays
Zm00001eb261280 Zea mays

User provided reference genes

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