Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05740 Brassica napus
A09p37720 Brassica napus
A09p39650 Brassica napus
Aa31LG7G8930 Aethionema arabicum
Aa31sc86G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4445 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4839 Anthoceros agrestis
Actinidia14854 Actinidia chinensis
Actinidia16564 Actinidia chinensis
Actinidia16619 Actinidia chinensis
Actinidia38389 Actinidia chinensis
Ah.02g127110 Amaranthus hybridus
Ah.03g137900 Amaranthus hybridus
Ah.09g237510 Amaranthus hybridus
AL1G39730 Arabidopsis lyrata
AL1G41940 Arabidopsis lyrata
Aqoxy1G02330 Aquilegia oxysepala
Aqoxy3G00400 Aquilegia oxysepala
Aqoxy3G03914 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.61YHCL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8I5M3N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ALUS4T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DG5TA8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FM64UF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L8ME0D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LRJK82 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TGNB37 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TT4JII Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U9BY3Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V7QGVL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WS2Q93 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WU9FE7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y4UZBH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z7YHJK Arachis hypogaea
AT1G25570 Arabidopsis thaliana
AT1G28340 Arabidopsis thaliana
ATR0681G142 Amborella trichopoda
ATR0763G230 Amborella trichopoda
Atru.chr10.1813 Acer truncatum
Atru.chr10.1828 Acer truncatum
Atru.chr11.1348 Acer truncatum
Atru.chr11.1359 Acer truncatum
AUR62002920 Chenopodium quinoa
AUR62014853 Chenopodium quinoa
AUR62017049 Chenopodium quinoa
AUR62035280 Chenopodium quinoa
BcaB07g32450 Brassica carinata
BcaC05g26437 Brassica carinata
BcaC05g26651 Brassica carinata
BcaC05g26843 Brassica carinata
BcaC09g52054 Brassica carinata
BolC5t31216H Brassica oleracea
BolC5t31438H Brassica oleracea
BraA01t00544Z Brassica rapa
BraA09t39283Z Brassica rapa
BraA09t39461Z Brassica rapa
C01p06320 Brassica napus
C05p24870 Brassica napus
C05p27240 Brassica napus
CAN.G184.93 Capsicum annuum
CAN.G189.50 Capsicum annuum
CAN.G529.28 Capsicum annuum
CANSAT35G1633 Cannabis sativa
CANSAT64G2292 Cannabis sativa
CARHR025880 Cardamine hirsuta
CARHR027830 Cardamine hirsuta
Carub.0001s2491 Capsella rubella
Carub.0001s2680 Capsella rubella
Ca_00353_v3 Cicer arietinum L.
Ca_10516_v3 Cicer arietinum L.
Ca_13606_v3 Cicer arietinum L.
Ca_30241_v3 Cicer arietinum L.
CBR_g10928 Chara braunii
CBR_g52007 Chara braunii
Cc02_g13670 Coffea canephora
Cc11_g10570 Coffea canephora
CDE01G0283 Ceratophyllum demersum
CDE01G0589 Ceratophyllum demersum
CDE02G1413 Ceratophyllum demersum
CDE02G2209 Ceratophyllum demersum
CDE02G2796 Ceratophyllum demersum
CDE08G0038 Ceratophyllum demersum
Cfa000513 Carpinus fangiana
Ciclev10014609m.g Citrus clementina
Ciclev10030946m.g Citrus clementina
CiPaw.09G062500 Carya illinoinensis
CiPaw.10G051500 Carya illinoinensis
CiPaw.15G003800 Carya illinoinensis
ClCG03G008070 Citrullus lanatus
ClCG03G009870 Citrullus lanatus
COL.COLO4_07870 Corchorus olitorius
COL.COLO4_31433 Corchorus olitorius
Cpa.g.sc1.220 Carica papaya
Cpa.g.sc27.19 Carica papaya
Cpa.g.sc27.21 Carica papaya
CsaV3_1G012480 Cucumis sativus L.
CsaV3_5G022990 Cucumis sativus L.
CSS0017153 Camellia sinensis var. sinensis
CSS0017460 Camellia sinensis var. sinensis
CSS0033687 Camellia sinensis var. sinensis
CSS0034765 Camellia sinensis var. sinensis
CSS0048533 Camellia sinensis var. sinensis
DCAR_003390 Daucus carota
DCAR_004055 Daucus carota
DCAR_007225 Daucus carota
Dinv16505 Davidia involucrata
Dinv17339 Davidia involucrata
Dinv21129 Davidia involucrata
Duzib160G0651 Durio zibethinus
Duzib235G0008 Durio zibethinus
Duzib248G0826 Durio zibethinus
Duzib251G0194 Durio zibethinus
ECA234G2593 Erigeron canadensis
ECA234G4172 Erigeron canadensis
EL10Ac6g14490 Beta vulgaris
EL10Ac8g20423 Beta vulgaris
Eucgr.B03053 Eucalyptus grandis
Eucgr.B03171 Eucalyptus grandis
Eucgr.D00605 Eucalyptus grandis
Eucgr.E03253 Eucalyptus grandis
Eucgr.G02346 Eucalyptus grandis
FAN11G1708 Fragaria x ananassa
FAN12G1492 Fragaria x ananassa
FAN12G3459 Fragaria x ananassa
FAN12G3599 Fragaria x ananassa
FAN16G0204 Fragaria x ananassa
FAN17G0871 Fragaria x ananassa
FAN21G1480 Fragaria x ananassa
FAN22G1156 Fragaria x ananassa
FAN25G2208 Fragaria x ananassa
FvH4_3g08800 Fragaria vesca
FvH4_4g28050 Fragaria vesca
Glyma.01G087700 Glycine max
Glyma.02G099800 Glycine max
Glyma.07G199500 Glycine max
Glyma.13G176900 Glycine max
Glyma.13G236700 Glycine max
Glyma.15G076900 Glycine max
Glyma.20G186100 Glycine max
Gohir.A03G096900 Gossypium hirsutum
Gohir.A09G073200 Gossypium hirsutum
Gohir.A10G027300 Gossypium hirsutum
Gohir.D02G116000 Gossypium hirsutum
Gohir.D09G072900 Gossypium hirsutum
Gohir.D10G027700 Gossypium hirsutum
Gorai.005G138000 Gossypium raimondii
Gorai.006G087900 Gossypium raimondii
Gorai.011G029600 Gossypium raimondii
GSVIVG01011948001 Vitis vinifera
GSVIVG01021096001 Vitis vinifera
HanXRQChr16g0517651 Helianthus annuus
HanXRQChr16g0528921 Helianthus annuus
HanXRQChr17g0568041 Helianthus annuus
Haze_06398 Corylus avellana
Haze_17444 Corylus avellana
Hma1.2p1_0208F.1_g088390 Hydrangea macrophylla
Hma1.2p1_0862F.1_g229910 Hydrangea macrophylla
HPP92_014191 Vanilla planifolia
HPP92_021957 Vanilla planifolia
Hund05767 Selenicereus undatus
Hund21210 Selenicereus undatus
Hund23784 Selenicereus undatus
Hund25101 Selenicereus undatus
Lalb_Chr02g0151751 Lupinus albus
Lalb_Chr04g0254911 Lupinus albus
Lalb_Chr17g0341891 Lupinus albus
Lalb_Chr20g0121641 Lupinus albus
Lj2A281T25 Lonicera japonica
Lj2A282G43 Lonicera japonica
Lj2C291T4 Lonicera japonica
Lj2g0005913 Lotus japonicus
Lj2P280T37 Lonicera japonica
Lj4g0026541 Lotus japonicus
Lj4g0027779 Lotus japonicus
Lj5g0010874 Lotus japonicus
Lj6A765T26 Lonicera japonica
Lj6g0006997 Lotus japonicus
Lsat_1_v5_gn_0_27660 Lactuca sativa
Lsat_1_v5_gn_4_19700 Lactuca sativa
Lsat_1_v5_gn_4_52181 Lactuca sativa
Lsat_1_v5_gn_5_53180 Lactuca sativa
Manes.06G071800 Manihot esculenta
Manes.14G097900 Manihot esculenta
Manes.16G030250 Manihot esculenta
Manes.17G048100 Manihot esculenta
Mapoly0013s0069 Marchantia polymorpha
Mapoly0037s0073 Marchantia polymorpha
MBI02_g32628_MAGBIO Magnolia biondii
MBI09_g36357_MAGBIO Magnolia biondii
MBI14_g09007_MAGBIO Magnolia biondii
MD10G1291000 Malus domestica
MD13G1046200 Malus domestica
MD16G1047800 Malus domestica
Medtr1g093630 Medicago truncatula
Medtr2g014290 Medicago truncatula
Medtr5g053610 Medicago truncatula
MELO3C002622.2 Cucumis melo
MELO3C002999.2 Cucumis melo
Migut.K01267 Erythranthe guttata
Migut.L01095 Erythranthe guttata
Migut.M01118 Erythranthe guttata
MSTRG.15860 Avicennia marina
MSTRG.2260 Avicennia marina
MSTRG.7349 Avicennia marina
MSTRG.7685 Avicennia marina
Nitab4.5_0000516g0120 Nicotiana tabacum
Nitab4.5_0000672g0010 Nicotiana tabacum
Nitab4.5_0002219g0040 Nicotiana tabacum
Nitab4.5_0006664g0020 Nicotiana tabacum
Nitab4.5_0008414g0030 Nicotiana tabacum
Nitab4.5_0011102g0020 Nicotiana tabacum
Nn1g04176 Nelumbo nucifera
Nn1g06448 Nelumbo nucifera
Nn3g17747 Nelumbo nucifera
Nn4g23736 Nelumbo nucifera
Oeu022115.1 Olea europaea
Oeu029368.1 Olea europaea
Oeu042032.1 Olea europaea
Os01g0140400 Oryza sativa ssp. japonica
Os07g0501800 Oryza sativa ssp. japonica
Peaxi162Scf00179g00014 Petunia axillaris
Peaxi162Scf00243g00056 Petunia axillaris
Peaxi162Scf00380g00315 Petunia axillaris
Peaxi162Scf00461g01116 Petunia axillaris
PGR004G1346 Punica granatum
PGR102G1789 Punica granatum
PGR119G1146 Punica granatum
PGSC0003DMG400000810 Solanum tuberosum
PGSC0003DMG400012816 Solanum tuberosum
PGSC0003DMG400029712 Solanum tuberosum
Phvul.002G230800 Phaseolus vulgaris
Phvul.003G027500 Phaseolus vulgaris
Phvul.006G183300 Phaseolus vulgaris
Phvul.007G102400 Phaseolus vulgaris
Potri.004G047300 Populus trichocarpa
Potri.008G117000 Populus trichocarpa
Potri.010G129300 Populus trichocarpa
Potri.011G056800 Populus trichocarpa
Pp3c13_11270 Physcomitrium patens
Pp3c15_3950 Physcomitrium patens
Pp3c16_5720 Physcomitrium patens
Pp3c26_12890 Physcomitrium patens
Pp3c27_5920 Physcomitrium patens
Pp3c2_37290 Physcomitrium patens
Pp3c3_10220 Physcomitrium patens
Pp3c7_20780 Physcomitrium patens
Pp3c9_5240 Physcomitrium patens
Pp3c9_7920 Physcomitrium patens
Prupe.1G305700 Prunus persica
Prupe.4G051100 Prunus persica
Psat0s4530g0040 Pisum sativum
Psat0s4813g0040 Pisum sativum
Psat1g203480 Pisum sativum
Psat2g090120 Pisum sativum
Psat4g204200 Pisum sativum
Psat6g176440 Pisum sativum
PSO063G6415 Papaver somniferum
PSO541G3961 Papaver somniferum
PSO675G8387 Papaver somniferum
PSO782G1617 Papaver somniferum
QL01p045245 Quercus lobata
QL05p042020 Quercus lobata
RcHm_v2.0_Chr2g0134681 Rosa chinensis
RcHm_v2.0_Chr4g0435791 Rosa chinensis
RcHm_v2.0_Chr5g0008961 Rosa chinensis
Rhsim13G0179800 Rhododendron simsii
RhsimUnG0136800 Rhododendron simsii
Sabra04G0029600 Salix brachista
Sabra08G0088700 Salix brachista
Sabra10G0098400 Salix brachista
Sabra11G0038600 Salix brachista
SalBow8G0156 Salvia bowleyana
SalBow8G1407 Salvia bowleyana
Sc05g0007500 Simmondsia chinensis
Sc11g0003090 Simmondsia chinensis
Sc17g0006050 Simmondsia chinensis
Sed0014528 Sechium edule
Sed0020441 Sechium edule
SEGI_01977 Sequoiadendron giganteum
SEGI_16004 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29704 Striga asiatica
SGA_v2.0_scaffold14G06828 Striga asiatica
SGA_v2.0_scaffold14G06831 Striga asiatica
SGA_v2.0_scaffold213G42220 Striga asiatica
SGA_v2.0_scaffold22G09679 Striga asiatica
SMO259G0037 Selaginella moellendorffii
Solyc02g077850.3 Solanum lycopersicum
Solyc03g006330.4 Solanum lycopersicum
Solyc05g009800.4 Solanum lycopersicum
Sopen02g022710 Solanum pennellii
Sopen03g002340 Solanum pennellii
Sopen05g005630 Solanum pennellii
Sp1g22640 Schrenkiella parvula
Sp1g24580 Schrenkiella parvula
TAR622G0736 Trochodendron aralioides
TAR624G0166 Trochodendron aralioides
TAR624G0590 Trochodendron aralioides
TAR626G0341 Trochodendron aralioides
TAR626G1469 Trochodendron aralioides
THA.LOC104820560 Tarenaya hassleriana
Thecc.02G360700 Theobroma cacao
Thecc.06G183000 Theobroma cacao
Thhalv10007065m.g Eutrema salsugineum
Thhalv10007074m.g Eutrema salsugineum
TPR.G16528 Trifolium pratense
TPR.G18693 Trifolium pratense
TPR.G22406 Trifolium pratense
TPR.G25947 Trifolium pratense
TPR.G33405 Trifolium pratense
TWI31G0789 Tripterygium wilfordii
TWI38G1298 Tripterygium wilfordii
TWI38G1755 Tripterygium wilfordii
TWI79G0857 Tripterygium wilfordii
unitig_26.g10269 Utricularia gibba
unitig_27.g25239 Utricularia gibba
unitig_699.g19514 Utricularia gibba
unitig_699.g19515 Utricularia gibba
vmacro01367 Vaccinium macrocarpon
vmacro03908 Vaccinium macrocarpon
VMungo0251G3185 Vigna mungo
VMungo0540G2072 Vigna mungo
VMungo0720G2076 Vigna mungo
VMungo1215G2911 Vigna mungo
Zm00001eb124780 Zea mays
Zm00001eb322150 Zea mays

User provided reference genes

Program Settings