Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p24070 Brassica napus
A01p42080 Brassica napus
A03p40760 Brassica napus
A05p30940 Brassica napus
A05p39020 Brassica napus
Aa31LG3G2560 Aethionema arabicum
Aa31LG8G5510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1818 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1903 Anthoceros agrestis
Actinidia06646 Actinidia chinensis
Actinidia06710 Actinidia chinensis
Actinidia09828 Actinidia chinensis
Actinidia11321 Actinidia chinensis
Actinidia18566 Actinidia chinensis
Actinidia18567 Actinidia chinensis
Actinidia19668 Actinidia chinensis
Actinidia39870 Actinidia chinensis
Actinidia40028 Actinidia chinensis
Ah.10g035460 Amaranthus hybridus
AL3G21340 Arabidopsis lyrata
AL3G32000 Arabidopsis lyrata
AL3G32020 Arabidopsis lyrata
Aqoxy1G00973 Aquilegia oxysepala
Aqoxy2G01497 Aquilegia oxysepala
Aqoxy6G00386 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.11IQ35 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3IIQ4T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FZR7VE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N0GMSU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q0U0LT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R9SA9Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S340SN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X0FYLW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z44M5S Arachis hypogaea
AT3G10030 Arabidopsis thaliana
AT3G18680 Arabidopsis thaliana
ATR0691G229 Amborella trichopoda
ATR0772G217 Amborella trichopoda
Atru.chr12.951 Acer truncatum
Atru.chr4.784 Acer truncatum
Atru.chr8.1667 Acer truncatum
AUR62009364 Chenopodium quinoa
AUR62023045 Chenopodium quinoa
AUR62033603 Chenopodium quinoa
AUR62037899 Chenopodium quinoa
BcaB04g18997 Brassica carinata
BcaB04g20757 Brassica carinata
BcaB04g21243 Brassica carinata
BcaB06g25919 Brassica carinata
BcaC01g03685 Brassica carinata
BcaC05g28583 Brassica carinata
BcaNung07383 Brassica carinata
BolC3t17261H Brassica oleracea
BolC5t33416H Brassica oleracea
BolC5t34461H Brassica oleracea
BraA01t02320Z Brassica rapa
BraA03t13234Z Brassica rapa
BraA05t21936Z Brassica rapa
BraA05t22693Z Brassica rapa
C03p49640 Brassica napus
C05p46860 Brassica napus
C05p58050 Brassica napus
CAN.G30.18 Capsicum annuum
CAN.G824.45 Capsicum annuum
CANSAT01G0761 Cannabis sativa
CARHR084530 Cardamine hirsuta
CARHR094060 Cardamine hirsuta
Carub.0003s0913 Capsella rubella
Carub.0003s1846 Capsella rubella
Ca_11611_v3 Cicer arietinum L.
Ca_17649_v3 Cicer arietinum L.
CBR_g46449 Chara braunii
Cc06_g05030 Coffea canephora
Cc07_g17890 Coffea canephora
CDE02G2103 Ceratophyllum demersum
CDE02G3374 Ceratophyllum demersum
CDE08G0107 Ceratophyllum demersum
CDE11G0305 Ceratophyllum demersum
Cfa002834 Carpinus fangiana
Cfa016511 Carpinus fangiana
Ciclev10011433m.g Citrus clementina
Ciclev10026618m.g Citrus clementina
Ciclev10031224m.g Citrus clementina
Ciclev10032787m.g Citrus clementina
Ciclev10033568m.g Citrus clementina
Ciclev10033666m.g Citrus clementina
Ciclev10033746m.g Citrus clementina
CiPaw.03G128000 Carya illinoinensis
CiPaw.09G007200 Carya illinoinensis
ClCG01G015540 Citrullus lanatus
ClCG10G019500 Citrullus lanatus
COL.COLO4_07705 Corchorus olitorius
COL.COLO4_14004 Corchorus olitorius
COL.COLO4_14005 Corchorus olitorius
COL.COLO4_22290 Corchorus olitorius
COL.COLO4_22291 Corchorus olitorius
COL.COLO4_34163 Corchorus olitorius
COL.COLO4_34169 Corchorus olitorius
Cpa.g.sc128.55 Carica papaya
Cpa.g.sc42.112 Carica papaya
Cpa.g.sc5.101 Carica papaya
Cpa.g.sc5.102 Carica papaya
Cre02.g093950 Chlamydomonas reinhardtii
CsaV3_3G036690 Cucumis sativus L.
CsaV3_6G041780 Cucumis sativus L.
CSS0007007 Camellia sinensis var. sinensis
CSS0008966 Camellia sinensis var. sinensis
CSS0009311 Camellia sinensis var. sinensis
CSS0017874 Camellia sinensis var. sinensis
CSS0023550 Camellia sinensis var. sinensis
CSS0025895 Camellia sinensis var. sinensis
CSS0043737 Camellia sinensis var. sinensis
DCAR_001356 Daucus carota
DCAR_015027 Daucus carota
Dinv11326 Davidia involucrata
Dinv24321 Davidia involucrata
Dinv31279 Davidia involucrata
Dinv35857 Davidia involucrata
Dinv37383 Davidia involucrata
Dinv37384 Davidia involucrata
Duzib093G1827 Durio zibethinus
Duzib128G1748 Durio zibethinus
Duzib147G1054 Durio zibethinus
Duzib264G0173 Durio zibethinus
ECA232G0572 Erigeron canadensis
ECA232G1157 Erigeron canadensis
ECA248G3876 Erigeron canadensis
EL10Ac2g04111 Beta vulgaris
EL10Ac7g16766 Beta vulgaris
Eucgr.A01571 Eucalyptus grandis
Eucgr.I00227 Eucalyptus grandis
FAN02G4563 Fragaria x ananassa
FAN05G3948 Fragaria x ananassa
FAN05G5698 Fragaria x ananassa
FAN09G3582 Fragaria x ananassa
FAN14G0970 Fragaria x ananassa
FAN19G2341 Fragaria x ananassa
FAN23G0632 Fragaria x ananassa
FAN26G2701 Fragaria x ananassa
FAN28G1786 Fragaria x ananassa
FvH4_1g24030 Fragaria vesca
FvH4_6g17490 Fragaria vesca
Glyma.05G095600 Glycine max
Glyma.05G189900 Glycine max
Glyma.08G147500 Glycine max
Glyma.10G065100 Glycine max
Glyma.10G201400 Glycine max
Glyma.13G149900 Glycine max
Glyma.20G188967 Glycine max
Glyma.20G189033 Glycine max
Gohir.A11G222900 Gossypium hirsutum
Gohir.A11G322400 Gossypium hirsutum
Gohir.A12G001166 Gossypium hirsutum
Gohir.D11G234100 Gossypium hirsutum
Gohir.D11G341500 Gossypium hirsutum
Gohir.D12G001001 Gossypium hirsutum
Gorai.003G065700 Gossypium raimondii
Gorai.007G371500 Gossypium raimondii
Gorai.008G000100 Gossypium raimondii
GSVIVG01026538001 Vitis vinifera
GSVIVG01033748001 Vitis vinifera
GSVIVG01034687001 Vitis vinifera
HanXRQChr01g0028421 Helianthus annuus
HanXRQChr01g0028431 Helianthus annuus
HanXRQChr05g0147481 Helianthus annuus
HanXRQChr10g0305411 Helianthus annuus
HanXRQChr13g0400101 Helianthus annuus
Haze_19513 Corylus avellana
Haze_25130 Corylus avellana
Haze_27498 Corylus avellana
HPP92_019158 Vanilla planifolia
HPP92_023106 Vanilla planifolia
Hund03450 Selenicereus undatus
Hund20443 Selenicereus undatus
Lalb_Chr00c34g0408481 Lupinus albus
Lalb_Chr00c34g0408491 Lupinus albus
Lalb_Chr00c34g0408541 Lupinus albus
Lalb_Chr06g0170121 Lupinus albus
Lalb_Chr06g0170131 Lupinus albus
Lalb_Chr06g0172171 Lupinus albus
Lalb_Chr12g0203241 Lupinus albus
Lalb_Chr13g0296531 Lupinus albus
Lj2A26G26 Lonicera japonica
Lj2A603G29 Lonicera japonica
Lj3A1005T46 Lonicera japonica
Lj3A1006T36 Lonicera japonica
Lj3C1006G7 Lonicera japonica
Lj4g0026256 Lotus japonicus
Lj5g0014282 Lotus japonicus
Lsat_1_v5_gn_0_10880 Lactuca sativa
Lsat_1_v5_gn_1_50681 Lactuca sativa
Lsat_1_v5_gn_4_140001 Lactuca sativa
Lsat_1_v5_gn_6_26780 Lactuca sativa
Manes.07G092200 Manihot esculenta
Manes.09G061000 Manihot esculenta
Manes.12G152500 Manihot esculenta
Mapoly0014s0140 Marchantia polymorpha
Mapoly0041s0104 Marchantia polymorpha
Mapoly0056s0074 Marchantia polymorpha
MBI17_g20185_MAGBIO Magnolia biondii
MBI17_g20225_MAGBIO Magnolia biondii
MCO08G173 Micromonas commoda
MD01G1011700 Malus domestica
MD02G1244500 Malus domestica
MD12G1097000 Malus domestica
MD12G1097100 Malus domestica
MD12G1097200 Malus domestica
MD14G1094100 Malus domestica
MD15G1338200 Malus domestica
Medtr1g061600 Medicago truncatula
Medtr8g093330 Medicago truncatula
MELO3C008043.2 Cucumis melo
MELO3C009423.2 Cucumis melo
Migut.H00746 Erythranthe guttata
Migut.L01743 Erythranthe guttata
MSTRG.10340 Avicennia marina
MSTRG.2670 Avicennia marina
Nitab4.5_0000004g0190 Nicotiana tabacum
Nitab4.5_0000680g0040 Nicotiana tabacum
Nitab4.5_0004616g0040 Nicotiana tabacum
Nitab4.5_0009834g0010 Nicotiana tabacum
Nn2g13961 Nelumbo nucifera
Nn5g28669 Nelumbo nucifera
Nn6g35089 Nelumbo nucifera
Oeu030476.1 Olea europaea
Oeu039842.1 Olea europaea
Oeu042719.1 Olea europaea
Os01g0965400 Oryza sativa ssp. japonica
Os04g0405800 Oryza sativa ssp. japonica
Peaxi162Scf00012g02113 Petunia axillaris
Peaxi162Scf00583g00223 Petunia axillaris
Peaxi162Scf00795g00039 Petunia axillaris
PGR004G2607 Punica granatum
PGR119G1905 Punica granatum
PGSC0003DMG400002727 Solanum tuberosum
PGSC0003DMG400031350 Solanum tuberosum
Phvul.002G270500 Phaseolus vulgaris
Phvul.007G105700 Phaseolus vulgaris
Phvul.007G224400 Phaseolus vulgaris
Potri.005G057700 Populus trichocarpa
Potri.006G117300 Populus trichocarpa
Potri.007G110201 Populus trichocarpa
Potri.007G110301 Populus trichocarpa
Potri.008G027000 Populus trichocarpa
Potri.010G233500 Populus trichocarpa
Pp3c20_22890 Physcomitrium patens
Pp3c23_10070 Physcomitrium patens
PRCOL_00004727 Prasinoderma coloniale
Prupe.2G090800 Prunus persica
Prupe.6G157900 Prunus persica
Prupe.7G120600 Prunus persica
Psat6g074440 Pisum sativum
Psat7g047480 Pisum sativum
PSO063G0947 Papaver somniferum
PSO339G5806 Papaver somniferum
PSO339G6363 Papaver somniferum
PSO384G0406 Papaver somniferum
PSO541G1709 Papaver somniferum
PSO675G1342 Papaver somniferum
PSO675G5875 Papaver somniferum
QL04p040616 Quercus lobata
QL04p040659 Quercus lobata
QL07p040902 Quercus lobata
RcHm_v2.0_Chr2g0120171 Rosa chinensis
RcHm_v2.0_Chr2g0173511 Rosa chinensis
RcHm_v2.0_Chr3g0471731 Rosa chinensis
RcHm_v2.0_Chr5g0071181 Rosa chinensis
Rhsim03G0083300 Rhododendron simsii
Rhsim08G0003300 Rhododendron simsii
Rhsim10G0138300 Rhododendron simsii
Sabra05G0049600 Salix brachista
Sabra06G0092200 Salix brachista
Sabra07G0090200 Salix brachista
Sabra08G0018500 Salix brachista
Sabra10G0181100 Salix brachista
Sc02g0001240 Simmondsia chinensis
Sc23g0006370 Simmondsia chinensis
Sed0001106 Sechium edule
Sed0017412 Sechium edule
Sed0021919 Sechium edule
SEGI_06494 Sequoiadendron giganteum
SEGI_21159 Sequoiadendron giganteum
SEGI_27989 Sequoiadendron giganteum
SEGI_30260 Sequoiadendron giganteum
SGA_v2.0_scaffold137G35152 Striga asiatica
SGA_v2.0_scaffold250G45001 Striga asiatica
SGA_v2.0_scaffold40G15432 Striga asiatica
SHI21319 Sapria himalayana
SMO112G0084 Selaginella moellendorffii
SMO348G0033 Selaginella moellendorffii
SMO348G0046 Selaginella moellendorffii
SMO364G0936 Selaginella moellendorffii
Solyc03g078080.4 Solanum lycopersicum
Solyc09g008850.3 Solanum lycopersicum
Sopen03g020810 Solanum pennellii
Sopen09g003640 Solanum pennellii
Sp3g08340 Schrenkiella parvula
Sp3g16750 Schrenkiella parvula
TAR369G0230 Trochodendron aralioides
TAR376G0602 Trochodendron aralioides
TAR623G0210 Trochodendron aralioides
TAR628G1313 Trochodendron aralioides
TAR636G2758 Trochodendron aralioides
THA.LOC104820422 Tarenaya hassleriana
THA.LOC104821855 Tarenaya hassleriana
THA.LOC104826936 Tarenaya hassleriana
Thecc.01G125500 Theobroma cacao
Thecc.05G078700 Theobroma cacao
Thecc.10G097600 Theobroma cacao
Thhalv10020471m.g Eutrema salsugineum
Thhalv10021101m.g Eutrema salsugineum
TPR.G37308 Trifolium pratense
TPR.G5662 Trifolium pratense
TPR.G5672 Trifolium pratense
TWI31G0121 Tripterygium wilfordii
TWI53G1136 Tripterygium wilfordii
TWI77G0431 Tripterygium wilfordii
TWI79G1680 Tripterygium wilfordii
unitig_8.g4713 Utricularia gibba
unitig_8.g4714 Utricularia gibba
vmacro07215 Vaccinium macrocarpon
vmacro07338 Vaccinium macrocarpon
vmacro07339 Vaccinium macrocarpon
vmacro12847 Vaccinium macrocarpon
VMungo0251G0826 Vigna mungo
VMungo0720G0149 Vigna mungo
VMungo1215G0284 Vigna mungo
Zm00001eb084300 Zea mays
Zm00001eb140160 Zea mays
Zm00001eb362410 Zea mays

User provided reference genes

Program Settings