Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p16740 Brassica napus
A07p37050 Brassica napus
Aa31LG4G10340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.259 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2296 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2555 Anthoceros agrestis
Actinidia15094 Actinidia chinensis
Actinidia15095 Actinidia chinensis
Actinidia27804 Actinidia chinensis
Actinidia37431 Actinidia chinensis
Actinidia37432 Actinidia chinensis
Ah.03g133010 Amaranthus hybridus
AL2G30050 Arabidopsis lyrata
AL2G30060 Arabidopsis lyrata
Aqoxy3G01206 Aquilegia oxysepala
Aqoxy3G01212 Aquilegia oxysepala
Aqoxy5G03765 Aquilegia oxysepala
Aqoxy6G00290 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EL0LZ0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea
AT1G70620 Arabidopsis thaliana
AT1G70630 Arabidopsis thaliana
ATR0824G058 Amborella trichopoda
ATR0824G114 Amborella trichopoda
ATR0824G210 Amborella trichopoda
Atru.chr11.2098 Acer truncatum
Atru.chr11.2099 Acer truncatum
Atru.chr11.2100 Acer truncatum
Atru.chr11.2101 Acer truncatum
Atru.chr11.2102 Acer truncatum
AUR62005461 Chenopodium quinoa
AUR62005462 Chenopodium quinoa
AUR62024278 Chenopodium quinoa
AUR62024280 Chenopodium quinoa
BcaB03g14827 Brassica carinata
BcaB05g24599 Brassica carinata
BcaC03g15213 Brassica carinata
BcaC08g46524 Brassica carinata
BolC2t08843H Brassica oleracea
BolC6t39526H Brassica oleracea
BraA02t06728Z Brassica rapa
BraA07t31268Z Brassica rapa
C02p28000 Brassica napus
C06p44610 Brassica napus
CAN.G832.2 Capsicum annuum
CAN.G832.3 Capsicum annuum
CANSAT01G0132 Cannabis sativa
CANSAT01G0233 Cannabis sativa
CANSAT01G1710 Cannabis sativa
CARHR063850 Cardamine hirsuta
CARHR063860 Cardamine hirsuta
Carub.0002s1735 Capsella rubella
Carub.0002s1736 Capsella rubella
Ca_04572_v3 Cicer arietinum L.
Ca_22584_v3 Cicer arietinum L.
CBR_g25868 Chara braunii
Cc05_g02030 Coffea canephora
Cc11_g15720 Coffea canephora
Cc11_g15730 Coffea canephora
CDE02G1945 Ceratophyllum demersum
CDE07G1782 Ceratophyllum demersum
CDE09G0281 Ceratophyllum demersum
CDE09G1003 Ceratophyllum demersum
Cfa009210 Carpinus fangiana
Cfa014206 Carpinus fangiana
Ciclev10017528m.g Citrus clementina
Ciclev10030634m.g Citrus clementina
Ciclev10033784m.g Citrus clementina
Ciclev10033870m.g Citrus clementina
CiPaw.03G283400 Carya illinoinensis
CiPaw.05G182500 Carya illinoinensis
CiPaw.05G182600 Carya illinoinensis
ClCG05G025730 Citrullus lanatus
ClCG05G025740 Citrullus lanatus
ClCG08G017700 Citrullus lanatus
COL.COLO4_19649 Corchorus olitorius
COL.COLO4_24276 Corchorus olitorius
COL.COLO4_24277 Corchorus olitorius
Cpa.g.sc136.48 Carica papaya
Cpa.g.sc33.18 Carica papaya
Cpa.g.sc33.19 Carica papaya
CsaV3_2G024930 Cucumis sativus L.
CsaV3_5G031120 Cucumis sativus L.
CsaV3_5G031140 Cucumis sativus L.
CSS0037172 Camellia sinensis var. sinensis
CSS0040170 Camellia sinensis var. sinensis
CSS0047479 Camellia sinensis var. sinensis
DCAR_007056 Daucus carota
DCAR_019665 Daucus carota
DCAR_021086 Daucus carota
DCAR_024430 Daucus carota
DCAR_031153 Daucus carota
DCAR_031154 Daucus carota
Dinv15235 Davidia involucrata
Dinv24784 Davidia involucrata
Dinv24785 Davidia involucrata
Dinv24786 Davidia involucrata
Duzib248G0209 Durio zibethinus
Duzib251G0042 Durio zibethinus
Duzib268G0062 Durio zibethinus
ECA233G4313 Erigeron canadensis
ECA233G4520 Erigeron canadensis
ECA234G3591 Erigeron canadensis
EL10Ac6g13807 Beta vulgaris
EL10Ac6g13809 Beta vulgaris
Eucgr.B03286 Eucalyptus grandis
Eucgr.B03287 Eucalyptus grandis
Eucgr.H02500 Eucalyptus grandis
FAN02G0217 Fragaria x ananassa
FAN02G4604 Fragaria x ananassa
FAN05G0600 Fragaria x ananassa
FAN05G3832 Fragaria x ananassa
FAN05G4965 Fragaria x ananassa
FAN07G0414 Fragaria x ananassa
FAN09G2779 Fragaria x ananassa
FAN12G0431 Fragaria x ananassa
FAN14G1296 Fragaria x ananassa
FAN14G2025 Fragaria x ananassa
FAN17G1038 Fragaria x ananassa
FAN22G2309 Fragaria x ananassa
FvH4_4g25541 Fragaria vesca
FvH4_4g25550 Fragaria vesca
FvH4_6g24840 Fragaria vesca
FvH4_6g40440 Fragaria vesca
Glyma.01G025900 Glycine max
Glyma.02G038900 Glycine max
Glyma.08G282202 Glycine max
Glyma.08G282300 Glycine max
Glyma.08G282400 Glycine max
Glyma.18G143900 Glycine max
Gohir.A03G135305 Gossypium hirsutum
Gohir.A03G135310 Gossypium hirsutum
Gohir.A03G135315 Gossypium hirsutum
Gohir.A04G136700 Gossypium hirsutum
Gohir.A07G193000 Gossypium hirsutum
Gohir.D02G158850 Gossypium hirsutum
Gohir.D02G158900 Gossypium hirsutum
Gohir.D04G179800 Gossypium hirsutum
Gohir.D07G199350 Gossypium hirsutum
Gorai.001G223200 Gossypium raimondii
Gorai.005G178600 Gossypium raimondii
Gorai.012G173000 Gossypium raimondii
GSVIVG01005754001 Vitis vinifera
GSVIVG01005755001 Vitis vinifera
GSVIVG01005756001 Vitis vinifera
HanXRQChr08g0208141 Helianthus annuus
HanXRQChr08g0208171 Helianthus annuus
HanXRQChr10g0306811 Helianthus annuus
Haze_12247 Corylus avellana
Haze_12592 Corylus avellana
Hma1.2p1_0160F.1_g071270 Hydrangea macrophylla
Hma1.2p1_0629F.1_g192180 Hydrangea macrophylla
HPP92_005414 Vanilla planifolia
HPP92_013546 Vanilla planifolia
HPP92_013593 Vanilla planifolia
Hund06026 Selenicereus undatus
Hund25388 Selenicereus undatus
Lalb_Chr05g0228431 Lupinus albus
Lalb_Chr16g0392171 Lupinus albus
Lalb_Chr16g0392181 Lupinus albus
Lj2A463G15 Lonicera japonica
Lj2g0007304 Lotus japonicus
Lj3C1058T7 Lonicera japonica
Lj4g0014379 Lotus japonicus
Lj4g0017193 Lotus japonicus
Lj4g0022819 Lotus japonicus
Lj6A812T43 Lonicera japonica
Lj6A812T44 Lonicera japonica
Lj6P812T17 Lonicera japonica
Lj6P812T18 Lonicera japonica
Lsat_1_v5_gn_0_41700 Lactuca sativa
Lsat_1_v5_gn_0_41981 Lactuca sativa
Lsat_1_v5_gn_5_122320 Lactuca sativa
Lsat_1_v5_gn_8_152141 Lactuca sativa
Manes.12G023250 Manihot esculenta
Manes.12G063951 Manihot esculenta
Manes.13G024400 Manihot esculenta
Manes.13G024500 Manihot esculenta
Manes.13G024600 Manihot esculenta
Mapoly0026s0020 Marchantia polymorpha
Mapoly0059s0093 Marchantia polymorpha
MBI10_g11201_MAGBIO Magnolia biondii
MBI10_g11202_MAGBIO Magnolia biondii
MBI15_g44612_MAGBIO Magnolia biondii
MD09G1129900 Malus domestica
MD13G1101500 Malus domestica
MD13G1101600 Malus domestica
MD13G1101700 Malus domestica
MD16G1102300 Malus domestica
MD17G1118900 Malus domestica
Medtr2g010150 Medicago truncatula
Medtr5g033070 Medicago truncatula
Medtr5g074820 Medicago truncatula
MELO3C010690.2 Cucumis melo
MELO3C011952.2 Cucumis melo
Migut.E00200 Erythranthe guttata
Migut.K00597 Erythranthe guttata
Migut.K00599 Erythranthe guttata
Migut.K00600 Erythranthe guttata
Migut.M00058 Erythranthe guttata
MSTRG.14910 Avicennia marina
MSTRG.7930 Avicennia marina
Nitab4.5_0000007g0050 Nicotiana tabacum
Nitab4.5_0000007g0090 Nicotiana tabacum
Nitab4.5_0001229g0060 Nicotiana tabacum
Nitab4.5_0003609g0010 Nicotiana tabacum
Nitab4.5_0009240g0010 Nicotiana tabacum
Nitab4.5_0013754g0020 Nicotiana tabacum
Nn3g16709 Nelumbo nucifera
Nn4g22623 Nelumbo nucifera
Nn4g22624 Nelumbo nucifera
Oeu009141.2 Olea europaea
Oeu023068.1 Olea europaea
Oeu029877.3 Olea europaea
Oeu034272.1 Olea europaea
Oeu034273.1 Olea europaea
Oeu056712.1 Olea europaea
Oeu059906.4 Olea europaea
Os03g0844850 Oryza sativa ssp. japonica
Os04g0661700 Oryza sativa ssp. japonica
Os05g0513700 Oryza sativa ssp. japonica
Peaxi162Scf00047g02117 Petunia axillaris
Peaxi162Scf00128g00134 Petunia axillaris
Peaxi162Scf00128g00135 Petunia axillaris
PGR102G0007 Punica granatum
PGR102G0011 Punica granatum
PGR119G0425 Punica granatum
PGSC0003DMG400028833 Solanum tuberosum
Phvul.002G149900 Phaseolus vulgaris
Phvul.003G065000 Phaseolus vulgaris
Phvul.003G065100 Phaseolus vulgaris
Phvul.003G065200 Phaseolus vulgaris
Potri.002G217100 Populus trichocarpa
Potri.008G186700 Populus trichocarpa
Potri.008G186800 Populus trichocarpa
Potri.008G186900 Populus trichocarpa
Potri.010G046000 Populus trichocarpa
Potri.010G046100 Populus trichocarpa
Potri.010G046225 Populus trichocarpa
Potri.014G170000 Populus trichocarpa
Pp3c18_680 Physcomitrium patens
Pp3c1_26680 Physcomitrium patens
Pp3c22_14720 Physcomitrium patens
Prupe.1G244100 Prunus persica
Prupe.1G244200 Prunus persica
Prupe.1G244300 Prunus persica
Prupe.3G195300 Prunus persica
Prupe.7G244600 Prunus persica
Psat2g100360 Pisum sativum
Psat4g115320 Pisum sativum
Psat4g115360 Pisum sativum
PSO017G3282 Papaver somniferum
PSO478G0257 Papaver somniferum
PSO478G2109 Papaver somniferum
QL03p058095 Quercus lobata
QL03p058099 Quercus lobata
QL03p058108 Quercus lobata
QL04p067058 Quercus lobata
RcHm_v2.0_Chr2g0155671 Rosa chinensis
RcHm_v2.0_Chr4g0432951 Rosa chinensis
RcHm_v2.0_Chr4g0432961 Rosa chinensis
Rhsim12G0040700 Rhododendron simsii
Rhsim12G0110400 Rhododendron simsii
Sabra08G0141500 Salix brachista
Sabra10G0022400 Salix brachista
SalBow2G0755 Salvia bowleyana
SalBow2G1965 Salvia bowleyana
Sc04g0009460 Simmondsia chinensis
Sc04g0009470 Simmondsia chinensis
Sc11g0000970 Simmondsia chinensis
Sed0005394 Sechium edule
Sed0010462 Sechium edule
Sed0017129 Sechium edule
Sed0021898 Sechium edule
Sed0026296 Sechium edule
SEGI_02615 Sequoiadendron giganteum
SEGI_21221 Sequoiadendron giganteum
SEGI_37990 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29562 Striga asiatica
SGA_v2.0_scaffold476G52131 Striga asiatica
SGA_v2.0_scaffold98G29360 Striga asiatica
SMO364G0056 Selaginella moellendorffii
Solyc05g013490.4 Solanum lycopersicum
Solyc05g013500.4 Solanum lycopersicum
Solyc12g006190.1 Solanum lycopersicum
Sopen05g008360 Solanum pennellii
Sopen05g008370 Solanum pennellii
Sopen05g008380 Solanum pennellii
Sopen12g002150 Solanum pennellii
Sp5g25780 Schrenkiella parvula
Sp5g25790 Schrenkiella parvula
TAR374G0333 Trochodendron aralioides
TAR374G0715 Trochodendron aralioides
TAR374G1279 Trochodendron aralioides
TAR374G1552 Trochodendron aralioides
TAR622G0079 Trochodendron aralioides
TAR624G1358 Trochodendron aralioides
TAR626G0223 Trochodendron aralioides
THA.LOC104822987 Tarenaya hassleriana
Thecc.01G199000 Theobroma cacao
Thecc.02G259600 Theobroma cacao
Thecc.02G259700 Theobroma cacao
Thecc.02G259800 Theobroma cacao
Thhalv10018098m.g Eutrema salsugineum
Thhalv10018343m.g Eutrema salsugineum
TPR.G1066 Trifolium pratense
TPR.G17746 Trifolium pratense
TPR.G17755 Trifolium pratense
TPR.G24664 Trifolium pratense
TPR.G2569 Trifolium pratense
TPR.G3025 Trifolium pratense
TPR.G3029 Trifolium pratense
TPR.G3084 Trifolium pratense
TPR.G38725 Trifolium pratense
TPR.G3894 Trifolium pratense
TWI36G0662 Tripterygium wilfordii
TWI36G0682 Tripterygium wilfordii
TWI75G1475 Tripterygium wilfordii
unitig_26.g10347 Utricularia gibba
unitig_26.g10348 Utricularia gibba
unitig_26.g10410 Utricularia gibba
vmacro01126 Vaccinium macrocarpon
vmacro16196 Vaccinium macrocarpon
VMungo0251G0889 Vigna mungo
VMungo0251G1361 Vigna mungo
VMungo1215G2544 Vigna mungo
Zm00001eb064330 Zea mays
Zm00001eb067460 Zea mays
Zm00001eb210880 Zea mays
Zm00001eb292730 Zea mays

User provided reference genes

Program Settings