Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p33600 Brassica napus
A03p42190 Brassica napus
A04p20140 Brassica napus
A05p27280 Brassica napus
A09p55420 Brassica napus
Aa31LG5G9760 Aethionema arabicum
Aa31LG8G8030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.96 Anthoceros agrestis
Actinidia01208 Actinidia chinensis
Actinidia09014 Actinidia chinensis
Actinidia14697 Actinidia chinensis
Actinidia18201 Actinidia chinensis
Actinidia21732 Actinidia chinensis
Actinidia30297 Actinidia chinensis
Actinidia39127 Actinidia chinensis
Ah.10g034630 Amaranthus hybridus
AL3G35380 Arabidopsis lyrata
AL4G18010 Arabidopsis lyrata
Aqoxy408s003 Aquilegia oxysepala
Aqoxy7G01345 Aquilegia oxysepala
Aqoxy7G03945 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.14SSB6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K5TY51 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MX5F6R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RZ10DS Arachis hypogaea
AT2G25930 Arabidopsis thaliana
AT3G21320 Arabidopsis thaliana
ATR0789G042 Amborella trichopoda
Atru.chr1.3602 Acer truncatum
Atru.chr7.2031 Acer truncatum
AUR62009205 Chenopodium quinoa
AUR62022273 Chenopodium quinoa
AUR62031978 Chenopodium quinoa
AUR62040202 Chenopodium quinoa
AUR62043053 Chenopodium quinoa
BcaB04g19160 Brassica carinata
BcaB04g20595 Brassica carinata
BcaB06g26224 Brassica carinata
BcaB06g29615 Brassica carinata
BcaB08g35231 Brassica carinata
BcaC01g03510 Brassica carinata
BcaC02g08316 Brassica carinata
BcaC02g08318 Brassica carinata
BcaC05g28179 Brassica carinata
BcaC07g40843 Brassica carinata
BcaC09g49069 Brassica carinata
BolC1t04237H Brassica oleracea
BolC3t17447H Brassica oleracea
BolC3t17448H Brassica oleracea
BolC4t27116H Brassica oleracea
BolC5t32947H Brassica oleracea
BolC8t51413H Brassica oleracea
BraA01t03472Z Brassica rapa
BraA03t13372Z Brassica rapa
BraA04t17595Z Brassica rapa
BraA05t21620Z Brassica rapa
BraA09t40944Z Brassica rapa
C01p42940 Brassica napus
C03p51640 Brassica napus
C04p55850 Brassica napus
C05p42190 Brassica napus
C08p38400 Brassica napus
CAN.G1118.2 Capsicum annuum
CAN.G208.72 Capsicum annuum
CAN.G309.59 Capsicum annuum
CAN.G635.31 Capsicum annuum
CANSAT25G2557 Cannabis sativa
CANSAT35G0680 Cannabis sativa
CARHR097240 Cardamine hirsuta
CARHR099560 Cardamine hirsuta
CARHR286480 Cardamine hirsuta
CARHR286490 Cardamine hirsuta
Carub.0003s2135 Capsella rubella
Carub.0004s0579 Capsella rubella
Ca_13193_v3 Cicer arietinum L.
Ca_15878_v3 Cicer arietinum L.
Ca_23288_v3 Cicer arietinum L.
Cc04_g02320 Coffea canephora
Cc08_g10110 Coffea canephora
CDE02G4466 Ceratophyllum demersum
CDE04G2418 Ceratophyllum demersum
CDE05G0620 Ceratophyllum demersum
CDE05G2141 Ceratophyllum demersum
Cfa017922 Carpinus fangiana
Ciclev10007592m.g Citrus clementina
Ciclev10024969m.g Citrus clementina
CiPaw.01G228300 Carya illinoinensis
CiPaw.15G042600 Carya illinoinensis
CiPaw.16G030600 Carya illinoinensis
ClCG08G016870 Citrullus lanatus
ClCG09G000470 Citrullus lanatus
COL.COLO4_21018 Corchorus olitorius
COL.COLO4_30566 Corchorus olitorius
Cpa.g.sc78.11 Carica papaya
CsaV3_2G025750 Cucumis sativus L.
CsaV3_7G034990 Cucumis sativus L.
CSS0007012 Camellia sinensis var. sinensis
CSS0012774 Camellia sinensis var. sinensis
CSS0015533 Camellia sinensis var. sinensis
CSS0015755 Camellia sinensis var. sinensis
DCAR_000777 Daucus carota
Dinv10639 Davidia involucrata
Dinv23417 Davidia involucrata
Dinv27956 Davidia involucrata
Dinv27957 Davidia involucrata
Dinv30408 Davidia involucrata
Dinv38742 Davidia involucrata
Duzib187G1876 Durio zibethinus
Duzib192G1016 Durio zibethinus
Duzib235G0132 Durio zibethinus
Duzib235G0710 Durio zibethinus
Duzib235G1352 Durio zibethinus
ECA232G2066 Erigeron canadensis
ECA233G1253 Erigeron canadensis
EL10Ac2g03948 Beta vulgaris
EL10Ac9g21158 Beta vulgaris
EL10Ac9g21159 Beta vulgaris
Eucgr.C02997 Eucalyptus grandis
Eucgr.F03094 Eucalyptus grandis
FAN05G1975 Fragaria x ananassa
FAN14G3209 Fragaria x ananassa
FAN15G1306 Fragaria x ananassa
FAN20G2425 Fragaria x ananassa
FAN24G1046 Fragaria x ananassa
FAN27G1765 Fragaria x ananassa
FvH4_2g32300 Fragaria vesca
FvH4_6g32780 Fragaria vesca
Glyma.04G050200 Glycine max
Glyma.07G013500 Glycine max
Glyma.08G197500 Glycine max
Glyma.14G091900 Glycine max
Glyma.17G215350 Glycine max
Glyma.17G231600 Glycine max
Gohir.A05G132932 Gossypium hirsutum
Gohir.A07G022152 Gossypium hirsutum
Gohir.A07G022156 Gossypium hirsutum
Gohir.A09G080800 Gossypium hirsutum
Gohir.D05G134900 Gossypium hirsutum
Gohir.D07G023200 Gossypium hirsutum
Gohir.D07G023300 Gossypium hirsutum
Gohir.D09G080800 Gossypium hirsutum
Gorai.001G024000 Gossypium raimondii
Gorai.001G024100 Gossypium raimondii
Gorai.003G060800 Gossypium raimondii
Gorai.006G096400 Gossypium raimondii
Gorai.009G138600 Gossypium raimondii
GSVIVG01016905001 Vitis vinifera
GSVIVG01035337001 Vitis vinifera
HanXRQChr02g0047961 Helianthus annuus
HanXRQChr04g0118841 Helianthus annuus
HanXRQChr05g0139911 Helianthus annuus
HanXRQChr08g0236141 Helianthus annuus
HanXRQChr17g0539091 Helianthus annuus
Haze_10972 Corylus avellana
Haze_15898 Corylus avellana
Haze_18227 Corylus avellana
Hma1.2p1_0679F.1_g202200 Hydrangea macrophylla
Hma1.2p1_0978F.1_g243465 Hydrangea macrophylla
Hma1.2p1_2150F.1_g315190 Hydrangea macrophylla
HPP92_005216 Vanilla planifolia
HPP92_005218 Vanilla planifolia
HPP92_005219 Vanilla planifolia
Hund03366 Selenicereus undatus
Hund19480 Selenicereus undatus
Lalb_Chr22g0355951 Lupinus albus
Lalb_Chr23g0267721 Lupinus albus
Lalb_Chr25g0280481 Lupinus albus
Lalb_Chr25g0280491 Lupinus albus
Lj1g0009532 Lotus japonicus
Lj3g0013066 Lotus japonicus
Lj8A559T41 Lonicera japonica
Lsat_1_v5_gn_3_25981 Lactuca sativa
Lsat_1_v5_gn_6_7561 Lactuca sativa
Manes.04G136600 Manihot esculenta
Manes.16G077200 Manihot esculenta
Mapoly0014s0139 Marchantia polymorpha
MBI01_g16594_MAGBIO Magnolia biondii
MBI04_g12187_MAGBIO Magnolia biondii
MD08G1074100 Malus domestica
MD08G1074200 Malus domestica
MD15G1062000 Malus domestica
Medtr1g016920 Medicago truncatula
Medtr3g103970 Medicago truncatula
Medtr7g016450 Medicago truncatula
Medtr8g008647 Medicago truncatula
Medtr8g015470 Medicago truncatula
Medtr8g015480 Medicago truncatula
Medtr8g015700 Medicago truncatula
Medtr8g015800 Medicago truncatula
MELO3C010769.2 Cucumis melo
MELO3C024410.2 Cucumis melo
Migut.A00160 Erythranthe guttata
Migut.E01551 Erythranthe guttata
Migut.I00992 Erythranthe guttata
MSTRG.1673 Avicennia marina
MSTRG.25934 Avicennia marina
MSTRG.9491 Avicennia marina
Nitab4.5_0000300g0090 Nicotiana tabacum
Nitab4.5_0000359g0210 Nicotiana tabacum
Nitab4.5_0000664g0010 Nicotiana tabacum
Nitab4.5_0001107g0080 Nicotiana tabacum
Nitab4.5_0002656g0030 Nicotiana tabacum
Nitab4.5_0005029g0030 Nicotiana tabacum
Nitab4.5_0008736g0010 Nicotiana tabacum
Nitab4.5_0010821g0010 Nicotiana tabacum
Nitab4.5_0012527g0020 Nicotiana tabacum
Nn4g23878 Nelumbo nucifera
Nn6g35379 Nelumbo nucifera
Nn8g38970 Nelumbo nucifera
Nn8g39499 Nelumbo nucifera
Oeu011788.1 Olea europaea
Oeu029400.1 Olea europaea
Oeu052823.2 Olea europaea
Oeu052824.2 Olea europaea
Oeu057702.1 Olea europaea
Os01g0566100 Oryza sativa ssp. japonica
Os06g0142600 Oryza sativa ssp. japonica
Peaxi162Scf00207g01153 Petunia axillaris
Peaxi162Scf00247g00514 Petunia axillaris
Peaxi162Scf00840g00014 Petunia axillaris
PGR031G2251 Punica granatum
PGR031G2454 Punica granatum
PGR044G1907 Punica granatum
PGR102G1682 Punica granatum
PGSC0003DMG400004837 Solanum tuberosum
PGSC0003DMG400013826 Solanum tuberosum
PGSC0003DMG400025519 Solanum tuberosum
PGSC0003DMG400029303 Solanum tuberosum
Phvul.001G032900 Phaseolus vulgaris
Phvul.010G142900 Phaseolus vulgaris
Potri.003G045000 Populus trichocarpa
Potri.006G233800 Populus trichocarpa
Pp3c11_14750 Physcomitrium patens
Pp3c1_12790 Physcomitrium patens
Pp3c7_10610 Physcomitrium patens
Pp3c7_10630 Physcomitrium patens
Prupe.1G416000 Prunus persica
Prupe.3G054300 Prunus persica
Psat0s304g0040 Pisum sativum
Psat1g117240 Pisum sativum
Psat1g117280 Pisum sativum
Psat2g058720 Pisum sativum
Psat2g125120 Pisum sativum
Psat2g146160 Pisum sativum
Psat4g192520 Pisum sativum
Psat5g037560 Pisum sativum
Psat5g064480 Pisum sativum
Psat7g235120 Pisum sativum
PSO210G0260 Papaver somniferum
PSO210G2564 Papaver somniferum
PSO210G2765 Papaver somniferum
PSO210G6919 Papaver somniferum
QL02p001761 Quercus lobata
QL02p001764 Quercus lobata
QL05p017252 Quercus lobata
QL05p017552 Quercus lobata
RcHm_v2.0_Chr2g0141891 Rosa chinensis
RcHm_v2.0_Chr6g0310391 Rosa chinensis
Rhsim02G0080900 Rhododendron simsii
Rhsim04G0229000 Rhododendron simsii
Rhsim07G0144300 Rhododendron simsii
Rhsim07G0144400 Rhododendron simsii
Rhsim11G0048100 Rhododendron simsii
Rhsim12G0204400 Rhododendron simsii
Sabra03G0021700 Salix brachista
Sabra06G0182100 Salix brachista
SalBow1G4435 Salvia bowleyana
SalBow4G1129 Salvia bowleyana
SalBow7G4453 Salvia bowleyana
Sc09g0009610 Simmondsia chinensis
Sed0020859 Sechium edule
Sed0022434 Sechium edule
Sed0023967 Sechium edule
SEGI_02074 Sequoiadendron giganteum
SEGI_20302 Sequoiadendron giganteum
SEGI_21968 Sequoiadendron giganteum
SEGI_29795 Sequoiadendron giganteum
SEGI_35205 Sequoiadendron giganteum
SGA_v2.0_scaffold163G38043 Striga asiatica
SGA_v2.0_scaffold169G38677 Striga asiatica
SGA_v2.0_scaffold251G45046 Striga asiatica
SGA_v2.0_scaffold4G02034 Striga asiatica
SGA_v2.0_scaffold68G22939 Striga asiatica
SHI18699 Sapria himalayana
SHI18700 Sapria himalayana
SMO115G0085 Selaginella moellendorffii
SMO141G0083 Selaginella moellendorffii
Solyc06g062480.4 Solanum lycopersicum
Solyc08g065870.4 Solanum lycopersicum
Solyc11g070100.2 Solanum lycopersicum
Solyc12g095900.2 Solanum lycopersicum
Sopen06g021960 Solanum pennellii
Sopen08g019570 Solanum pennellii
Sopen11g028770 Solanum pennellii
Sopen12g031800 Solanum pennellii
Sp3g19380 Schrenkiella parvula
Sp4g05820 Schrenkiella parvula
SpUn0059_0010 Schrenkiella parvula
TAR383G0578 Trochodendron aralioides
TAR626G0962 Trochodendron aralioides
TAR626G1173 Trochodendron aralioides
TAR636G1087 Trochodendron aralioides
TAR636G1463 Trochodendron aralioides
THA.LOC104803738 Tarenaya hassleriana
THA.LOC104803800 Tarenaya hassleriana
THA.LOC104810626 Tarenaya hassleriana
THA.LOC104811256 Tarenaya hassleriana
THA.LOC104817941 Tarenaya hassleriana
THA.LOC104818577 Tarenaya hassleriana
Thecc.06G104900 Theobroma cacao
Thecc.09G050200 Theobroma cacao
Thhalv10001926m.g Eutrema salsugineum
Thhalv10020453m.g Eutrema salsugineum
TPR.G13003 Trifolium pratense
TPR.G25357 Trifolium pratense
TPR.G8759 Trifolium pratense
TPR.G981 Trifolium pratense
TWI32G0713 Tripterygium wilfordii
TWI34G0767 Tripterygium wilfordii
TWI63G1309 Tripterygium wilfordii
unitig_32.g11480 Utricularia gibba
unitig_748.g7514 Utricularia gibba
unitig_748.g7515 Utricularia gibba
unitig_8.g3567 Utricularia gibba
vmacro00174 Vaccinium macrocarpon
vmacro05274 Vaccinium macrocarpon
vmacro17005 Vaccinium macrocarpon
VMungo0331G0258 Vigna mungo
VMungo0647G1425 Vigna mungo
VMungo1309G2835 Vigna mungo
Zm00001eb159890 Zea mays
Zm00001eb297250 Zea mays

User provided reference genes

Program Settings