Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02310 Brassica napus
A02p03880 Brassica napus
A05p44120 Brassica napus
A06p33270 Brassica napus
A06p33280 Brassica napus
A07p33930 Brassica napus
A09p11830 Brassica napus
A09p35680 Brassica napus
A10p22320 Brassica napus
Aa31LG11G12670 Aethionema arabicum
Aa31LG5G13540 Aethionema arabicum
Aa31LG6G13380 Aethionema arabicum
Aa31LG8G15700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2071 Anthoceros agrestis
Actinidia08744 Actinidia chinensis
Actinidia12126 Actinidia chinensis
Actinidia12127 Actinidia chinensis
Actinidia16028 Actinidia chinensis
Actinidia16029 Actinidia chinensis
Actinidia18706 Actinidia chinensis
Actinidia25770 Actinidia chinensis
Actinidia25771 Actinidia chinensis
Actinidia34307 Actinidia chinensis
Actinidia36568 Actinidia chinensis
Ah.03g140960 Amaranthus hybridus
Ah.04g156550 Amaranthus hybridus
Ah.13g076360 Amaranthus hybridus
AL3G12570 Arabidopsis lyrata
AL3G51600 Arabidopsis lyrata
AL6G27930 Arabidopsis lyrata
AL7G14490 Arabidopsis lyrata
Aqoxy5G01603 Aquilegia oxysepala
Aqoxy7G03279 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.36GKGQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4D1FGW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W14UHG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YEIC8N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZLW3JE Arachis hypogaea
AT2G18330 Arabidopsis thaliana
AT3G03060 Arabidopsis thaliana
AT4G36580 Arabidopsis thaliana
AT5G16930 Arabidopsis thaliana
ATR0332G044 Amborella trichopoda
ATR0332G070 Amborella trichopoda
ATR0568G213 Amborella trichopoda
Atru.chr12.1965 Acer truncatum
Atru.chr3.592 Acer truncatum
Atru.chr3.593 Acer truncatum
Atru.chr3.594 Acer truncatum
AUR62002063 Chenopodium quinoa
AUR62004063 Chenopodium quinoa
AUR62007576 Chenopodium quinoa
AUR62028177 Chenopodium quinoa
BcaB04g21386 Brassica carinata
BcaB07g31674 Brassica carinata
BcaB08g34806 Brassica carinata
BcaC03g18526 Brassica carinata
BcaC04g22914 Brassica carinata
BcaNung00433 Brassica carinata
BcaNung00720 Brassica carinata
BcaNung04421 Brassica carinata
BNapus_Darmor_BZH_scaffold_129p00050 Brassica napus
BolC1t00240H Brassica oleracea
BolC1t05851H Brassica oleracea
BolC2t06784H Brassica oleracea
BolC3t18175H Brassica oleracea
BolC5t35044H Brassica oleracea
BolC9t58849H Brassica oleracea
BolC9t58850H Brassica oleracea
BraA01t00219Z Brassica rapa
BraA01t04596Z Brassica rapa
BraA02t05352Z Brassica rapa
BraA06t26257Z Brassica rapa
BraA07t31019Z Brassica rapa
BraA09t36829Z Brassica rapa
BraA10t44291Z Brassica rapa
BraSC90t46699Z Brassica rapa
C01p02520 Brassica napus
C02p08680 Brassica napus
C03p59170 Brassica napus
C05p63750 Brassica napus
C09p13930 Brassica napus
C09p60160 Brassica napus
C09p60170 Brassica napus
CAN.G1131.12 Capsicum annuum
CAN.G53.19 Capsicum annuum
CANSAT01G1977 Cannabis sativa
CANSAT21G0564 Cannabis sativa
CARHR077070 Cardamine hirsuta
CARHR108920 Cardamine hirsuta
CARHR196220 Cardamine hirsuta
CARHR244880 Cardamine hirsuta
Carub.0003s0221 Capsella rubella
Carub.0003s3249 Capsella rubella
Carub.0006s1514 Capsella rubella
Carub.0007s0375 Capsella rubella
Ca_04184_v3 Cicer arietinum L.
Ca_04917_v3 Cicer arietinum L.
Ca_24856_v3 Cicer arietinum L.
CBR_g15998 Chara braunii
CBR_g3473 Chara braunii
Cc00_g28880 Coffea canephora
Cc02_g00270 Coffea canephora
Cc07_g09630 Coffea canephora
CDE03G0172 Ceratophyllum demersum
CDE03G0473 Ceratophyllum demersum
CDE05G3597 Ceratophyllum demersum
CDE06G0105 Ceratophyllum demersum
CDE06G1003 Ceratophyllum demersum
CDE06G1930 Ceratophyllum demersum
CDE11G0354 Ceratophyllum demersum
CDE11G0604 Ceratophyllum demersum
Cfa016034 Carpinus fangiana
Ciclev10019245m.g Citrus clementina
Ciclev10025141m.g Citrus clementina
CiPaw.01G040500 Carya illinoinensis
CiPaw.05G219800 Carya illinoinensis
CiPaw.06G032700 Carya illinoinensis
ClCG01G019640 Citrullus lanatus
ClCG02G007670 Citrullus lanatus
COL.COLO4_11802 Corchorus olitorius
COL.COLO4_11803 Corchorus olitorius
COL.COLO4_22061 Corchorus olitorius
COL.COLO4_22062 Corchorus olitorius
Cpa.g.sc6.123 Carica papaya
Cre03.g144967 Chlamydomonas reinhardtii
CsaV3_2G036040 Cucumis sativus L.
CsaV3_6G046310 Cucumis sativus L.
CSS0002174 Camellia sinensis var. sinensis
CSS0028493 Camellia sinensis var. sinensis
CSS0032508 Camellia sinensis var. sinensis
CSS0041218 Camellia sinensis var. sinensis
DCAR_009012 Daucus carota
DCAR_017297 Daucus carota
DCAR_020408 Daucus carota
Dinv13519 Davidia involucrata
Dinv17256 Davidia involucrata
Dinv29158 Davidia involucrata
Dinv39993 Davidia involucrata
Duzib128G1237 Durio zibethinus
Duzib147G1129 Durio zibethinus
Duzib177G0814 Durio zibethinus
ECA232G0118 Erigeron canadensis
ECA232G4477 Erigeron canadensis
EL10Ac3g05076 Beta vulgaris
EL10Ac6g15550 Beta vulgaris
Eucgr.A02970 Eucalyptus grandis
Eucgr.I02432 Eucalyptus grandis
FAN01G0040 Fragaria x ananassa
FAN03G0020 Fragaria x ananassa
FAN10G1963 Fragaria x ananassa
FAN19G2063 Fragaria x ananassa
FAN26G3237 Fragaria x ananassa
FAN28G2181 Fragaria x ananassa
FvH4_1g13120 Fragaria vesca
FvH4_7g33981 Fragaria vesca
Glyma.01G174000 Glycine max
Glyma.11G069000 Glycine max
Glyma.11G091700 Glycine max
Glyma.12G017700 Glycine max
Gohir.A08G221800 Gossypium hirsutum
Gohir.A11G183600 Gossypium hirsutum
Gohir.D08G242400 Gossypium hirsutum
Gohir.D11G190100 Gossypium hirsutum
Gorai.004G258100 Gossypium raimondii
Gorai.007G202400 Gossypium raimondii
GSVIVG01018945001 Vitis vinifera
GSVIVG01024407001 Vitis vinifera
HanXRQChr03g0088431 Helianthus annuus
HanXRQChr05g0139021 Helianthus annuus
HanXRQChr09g0261601 Helianthus annuus
Haze_00424 Corylus avellana
Hma1.2p1_1680F.1_g297190 Hydrangea macrophylla
HPP92_014700 Vanilla planifolia
HPP92_019947 Vanilla planifolia
Hund09792 Selenicereus undatus
Hund13983 Selenicereus undatus
Hund16436 Selenicereus undatus
Lalb_Chr01g0000911 Lupinus albus
Lalb_Chr09g0322301 Lupinus albus
Lalb_Chr16g0377761 Lupinus albus
Lalb_Chr19g0139971 Lupinus albus
Lj1C1033G19 Lonicera japonica
Lj2A454G52 Lonicera japonica
Lj2g0021742 Lotus japonicus
Lj3A887T78 Lonicera japonica
Lj3g0000079 Lotus japonicus
Lsat_1_v5_gn_2_22880 Lactuca sativa
Lsat_1_v5_gn_4_151281 Lactuca sativa
Lsat_1_v5_gn_6_118160 Lactuca sativa
Lsat_1_v5_gn_8_52001 Lactuca sativa
Lsat_1_v5_gn_8_60001 Lactuca sativa
Lsat_1_v5_gn_9_47501 Lactuca sativa
Manes.02G094700 Manihot esculenta
Manes.06G171600 Manihot esculenta
Mapoly0007s0098 Marchantia polymorpha
MBI04_g20980_MAGBIO Magnolia biondii
MCO14G041 Micromonas commoda
MD01G1236100 Malus domestica
MD01G1236200 Malus domestica
MD02G1145900 Malus domestica
MD07G1308800 Malus domestica
MD07G1308900 Malus domestica
MD15G1260100 Malus domestica
Medtr4g077880 Medicago truncatula
Medtr5g020530 Medicago truncatula
Medtr6g005760 Medicago truncatula
MELO3C007833.2 Cucumis melo
MELO3C024728.2 Cucumis melo
Migut.F00096 Erythranthe guttata
Migut.F00947 Erythranthe guttata
Migut.H00981 Erythranthe guttata
MSTRG.23517 Avicennia marina
MSTRG.8574 Avicennia marina
Nitab4.5_0000136g0360 Nicotiana tabacum
Nitab4.5_0010396g0010 Nicotiana tabacum
Nitab4.5_0011186g0010 Nicotiana tabacum
Nitab4.5_0017702g0010 Nicotiana tabacum
Nn1g01899 Nelumbo nucifera
Nn3g19355 Nelumbo nucifera
Nn5g29636 Nelumbo nucifera
Oeu033654.1 Olea europaea
Oeu042271.1 Olea europaea
Oeu060386.1 Olea europaea
Oeu062815.1 Olea europaea
Os02g0697600 Oryza sativa ssp. japonica
Os02g0706500 Oryza sativa ssp. japonica
Peaxi162Scf00008g03517 Petunia axillaris
Peaxi162Scf00745g00849 Petunia axillaris
PGR042G2039 Punica granatum
PGSC0003DMG400015506 Solanum tuberosum
PGSC0003DMG401003154 Solanum tuberosum
PGSC0003DMG402003154 Solanum tuberosum
PGSC0003DMG403003154 Solanum tuberosum
Phvul.002G031200 Phaseolus vulgaris
Phvul.005G044000 Phaseolus vulgaris
Potri.001G458200 Populus trichocarpa
Potri.005G122300 Populus trichocarpa
Potri.007G023900 Populus trichocarpa
Potri.011G143300 Populus trichocarpa
Pp3c16_10340 Physcomitrium patens
Pp3c5_16820 Physcomitrium patens
PRCOL_00000633 Prasinoderma coloniale
PRCOL_00001624 Prasinoderma coloniale
Prupe.2G326200 Prunus persica
Prupe.7G156000 Prunus persica
Psat1g056480 Pisum sativum
Psat2g158880 Pisum sativum
Psat7g171760 Pisum sativum
PSO063G3363 Papaver somniferum
PSO170G2395 Papaver somniferum
PSO210G7389 Papaver somniferum
PSO633G0001 Papaver somniferum
PSO782G2281 Papaver somniferum
PSO782G4540 Papaver somniferum
QL06p046420 Quercus lobata
QL09p023805 Quercus lobata
RcHm_v2.0_Chr1g0384221 Rosa chinensis
RcHm_v2.0_Chr2g0101291 Rosa chinensis
Rhsim03G0221500 Rhododendron simsii
Rhsim08G0118400 Rhododendron simsii
Rhsim09G0212800 Rhododendron simsii
RhsimUnG0100200 Rhododendron simsii
Sabra05G0100400 Salix brachista
Sabra07G0020800 Salix brachista
Sabra16G0310600 Salix brachista
SalBow1G2248 Salvia bowleyana
SalBow1G3409 Salvia bowleyana
SalBow1G8192 Salvia bowleyana
SalBow2G0164 Salvia bowleyana
SalBow5G1962 Salvia bowleyana
SalBow6G6218 Salvia bowleyana
Sc03g0003050 Simmondsia chinensis
Sc19g0000170 Simmondsia chinensis
Sed0003603 Sechium edule
Sed0005215 Sechium edule
Sed0005245 Sechium edule
Sed0022613 Sechium edule
SEGI_03206 Sequoiadendron giganteum
SEGI_11756 Sequoiadendron giganteum
SEGI_14542 Sequoiadendron giganteum
SEGI_23083 Sequoiadendron giganteum
SEGI_23598 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08510 Striga asiatica
SGA_v2.0_scaffold50G18441 Striga asiatica
SGA_v2.0_scaffold54G19544 Striga asiatica
SGA_v2.0_scaffold59G20766 Striga asiatica
SHI21455 Sapria himalayana
SMO347G0120 Selaginella moellendorffii
Solyc02g062700.3 Solanum lycopersicum
Solyc03g097020.4 Solanum lycopersicum
Sopen02g013720 Solanum pennellii
Sopen03g027770 Solanum pennellii
Sp3g02100 Schrenkiella parvula
Sp3g31730 Schrenkiella parvula
Sp6g27180 Schrenkiella parvula
Sp7g34220 Schrenkiella parvula
SpUn0030_0100 Schrenkiella parvula
TAR369G0662 Trochodendron aralioides
TAR375G0021 Trochodendron aralioides
TAR628G0596 Trochodendron aralioides
TAR628G1572 Trochodendron aralioides
THA.LOC104802922 Tarenaya hassleriana
THA.LOC104804231 Tarenaya hassleriana
THA.LOC104807453 Tarenaya hassleriana
THA.LOC104820883 Tarenaya hassleriana
THA.LOC104827214 Tarenaya hassleriana
Thecc.01G033900 Theobroma cacao
Thecc.05G213500 Theobroma cacao
Thhalv10012943m.g Eutrema salsugineum
Thhalv10020284m.g Eutrema salsugineum
Thhalv10022590m.g Eutrema salsugineum
Thhalv10024668m.g Eutrema salsugineum
TPR.G21439 Trifolium pratense
TPR.G27188 Trifolium pratense
TPR.G27190 Trifolium pratense
TPR.G35375 Trifolium pratense
TWI09G0124 Tripterygium wilfordii
TWI34G1615 Tripterygium wilfordii
TWI60G1475 Tripterygium wilfordii
unitig_0.g328 Utricularia gibba
unitig_0.g329 Utricularia gibba
vmacro06511 Vaccinium macrocarpon
vmacro17824 Vaccinium macrocarpon
vmacro22174 Vaccinium macrocarpon
VMungo1080G0700 Vigna mungo
VMungo1215G0902 Vigna mungo
Zm00001eb117860 Zea mays
Zm00001eb187980 Zea mays
Zm00001eb188400 Zea mays
Zm00001eb251490 Zea mays
Zm00001eb252170 Zea mays

User provided reference genes

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