Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02150 Brassica napus
A05p42270 Brassica napus
A08p22400 Brassica napus
Aa31LG5G15660 Aethionema arabicum
Aa31LG5G15670 Aethionema arabicum
Aa31LG5G15680 Aethionema arabicum
Aa31LG5G15690 Aethionema arabicum
Aa31LG5G15700 Aethionema arabicum
Aa31LG6G13570 Aethionema arabicum
Aa31LG9G6900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2073 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.26 Anthoceros agrestis
Actinidia05699 Actinidia chinensis
Actinidia19162 Actinidia chinensis
Actinidia23636 Actinidia chinensis
Actinidia35655 Actinidia chinensis
Ah.03g139270 Amaranthus hybridus
Ah.04g160260 Amaranthus hybridus
AL3G15820 Arabidopsis lyrata
AL3G15830 Arabidopsis lyrata
AL3G15850 Arabidopsis lyrata
AL3G15870 Arabidopsis lyrata
AL7G14240 Arabidopsis lyrata
Aqoxy2G03364 Aquilegia oxysepala
Aqoxy517s002 Aquilegia oxysepala
Aqoxy5G01691 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.75ZNZD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ET6U27 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FQI9Y5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MW9S37 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P209V5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V7GKU1 Arachis hypogaea
AT3G05350 Arabidopsis thaliana
AT4G36760 Arabidopsis thaliana
ATR0332G052 Amborella trichopoda
ATR0733G109 Amborella trichopoda
Atru.chr2.397 Acer truncatum
Atru.chr3.525 Acer truncatum
Atru.chr3.529 Acer truncatum
AUR62000821 Chenopodium quinoa
AUR62003185 Chenopodium quinoa
AUR62005150 Chenopodium quinoa
AUR62008006 Chenopodium quinoa
BcaB03g12371 Brassica carinata
BcaC01g00440 Brassica carinata
BcaC05g30133 Brassica carinata
BcaC05g30134 Brassica carinata
BcaC05g30152 Brassica carinata
BcaNung00702 Brassica carinata
BcaNung00926 Brassica carinata
BcaNung04438 Brassica carinata
BolC1t00101H Brassica oleracea
BolC1t00224H Brassica oleracea
BolC3t20238H Brassica oleracea
BolC5t34845H Brassica oleracea
BraA01t00204Z Brassica rapa
BraA05t23026Z Brassica rapa
BraA08t34197Z Brassica rapa
C01p02330 Brassica napus
C03p79860 Brassica napus
C05p61850 Brassica napus
CAN.G1034.43 Capsicum annuum
CAN.G2806.2 Capsicum annuum
CAN.G358.128 Capsicum annuum
CAN.G865.7 Capsicum annuum
CANSAT01G1531 Cannabis sativa
CANSAT54G1903 Cannabis sativa
CARHR079710 Cardamine hirsuta
CARHR245120 Cardamine hirsuta
Carub.0003s0464 Capsella rubella
Carub.0007s0356 Capsella rubella
Ca_00395_v3 Cicer arietinum L.
Ca_09353_v3 Cicer arietinum L.
CBR_g35038 Chara braunii
CBR_g66817 Chara braunii
Cc02_g33370 Coffea canephora
Cc07_g09130 Coffea canephora
CDE07G1989 Ceratophyllum demersum
CDE10G0254 Ceratophyllum demersum
CDE10G0267 Ceratophyllum demersum
CDE10G0470 Ceratophyllum demersum
Cfa006592 Carpinus fangiana
Cfa024682 Carpinus fangiana
Ciclev10000570m.g Citrus clementina
Ciclev10025046m.g Citrus clementina
CiPaw.01G034300 Carya illinoinensis
CiPaw.02G015200 Carya illinoinensis
CiPaw.08G164400 Carya illinoinensis
ClCG01G019320 Citrullus lanatus
ClCG02G015770 Citrullus lanatus
COL.COLO4_13461 Corchorus olitorius
COL.COLO4_22124 Corchorus olitorius
Cpa.g.sc158.12 Carica papaya
Cpa.g.sc158.13 Carica papaya
Cpa.g.sc48.59 Carica papaya
Cre09.g408851 Chlamydomonas reinhardtii
CsaV3_2G005330 Cucumis sativus L.
CsaV3_6G046010 Cucumis sativus L.
CSS0002188 Camellia sinensis var. sinensis
CSS0013567 Camellia sinensis var. sinensis
CSS0018448 Camellia sinensis var. sinensis
DCAR_001938 Daucus carota
DCAR_017225 Daucus carota
Dinv01738 Davidia involucrata
Dinv39955 Davidia involucrata
Dinv40291 Davidia involucrata
Dinv40293 Davidia involucrata
Duzib147G0951 Durio zibethinus
Duzib177G1200 Durio zibethinus
Duzib264G0502 Durio zibethinus
ECA236G4184 Erigeron canadensis
ECA246G3949 Erigeron canadensis
EL10Ac4g09356 Beta vulgaris
EL10Ac6g14907 Beta vulgaris
Eucgr.H04494 Eucalyptus grandis
Eucgr.I02468 Eucalyptus grandis
Eucgr.I02469 Eucalyptus grandis
FAN01G0999 Fragaria x ananassa
FAN02G1734 Fragaria x ananassa
FAN05G1015 Fragaria x ananassa
FAN05G1450 Fragaria x ananassa
FAN09G4487 Fragaria x ananassa
FAN11G3270 Fragaria x ananassa
FAN12G0025 Fragaria x ananassa
FAN12G3875 Fragaria x ananassa
FAN14G0113 Fragaria x ananassa
FAN14G4994 Fragaria x ananassa
FAN14G4996 Fragaria x ananassa
FAN19G2657 Fragaria x ananassa
FAN23G0497 Fragaria x ananassa
FAN24G3082 Fragaria x ananassa
FAN26G1609 Fragaria x ananassa
FAN28G0179 Fragaria x ananassa
FAN28G0285 Fragaria x ananassa
FvH4_1g13980 Fragaria vesca
FvH4_4g05630 Fragaria vesca
FvH4_4g17470 Fragaria vesca
FvH4_6g06000 Fragaria vesca
Glyma.01G177700 Glycine max
Glyma.03G237500 Glycine max
Glyma.11G064500 Glycine max
Glyma.11G064600 Glycine max
Glyma.19G235100 Glycine max
Gohir.A10G094400 Gossypium hirsutum
Gohir.A11G265300 Gossypium hirsutum
Gohir.A11G295400 Gossypium hirsutum
Gohir.A12G065600 Gossypium hirsutum
Gohir.D10G093400 Gossypium hirsutum
Gohir.D11G275500 Gossypium hirsutum
Gohir.D11G311500 Gossypium hirsutum
Gohir.D12G065900 Gossypium hirsutum
Gorai.007G297300 Gossypium raimondii
Gorai.007G342300 Gossypium raimondii
Gorai.008G069200 Gossypium raimondii
Gorai.011G102600 Gossypium raimondii
GSVIVG01000079001 Vitis vinifera
GSVIVG01014914001 Vitis vinifera
GSVIVG01019016001 Vitis vinifera
HanXRQChr08g0233381 Helianthus annuus
HanXRQChr11g0338881 Helianthus annuus
HanXRQChr12g0375381 Helianthus annuus
HanXRQChr15g0469951 Helianthus annuus
Haze_04192 Corylus avellana
Haze_15125 Corylus avellana
Haze_15126 Corylus avellana
Haze_21896 Corylus avellana
Haze_26910 Corylus avellana
Hma1.2p1_0928F.1_g237750 Hydrangea macrophylla
Hma1.2p1_1228F.1_g268650 Hydrangea macrophylla
Hma1.2p1_2618F.1_g325530 Hydrangea macrophylla
HPP92_009520 Vanilla planifolia
HPP92_009521 Vanilla planifolia
HPP92_009562 Vanilla planifolia
HPP92_014234 Vanilla planifolia
HPP92_026495 Vanilla planifolia
Hund07074 Selenicereus undatus
Hund14138 Selenicereus undatus
Hund14139 Selenicereus undatus
Hund16577 Selenicereus undatus
Lalb_Chr15g0077211 Lupinus albus
Lalb_Chr16g0377931 Lupinus albus
Lj1g0009341 Lotus japonicus
Lj2C448G2 Lonicera japonica
Lj2g0014643 Lotus japonicus
Lj4A196T47 Lonicera japonica
Lj9A81G10 Lonicera japonica
Lj9C81T6 Lonicera japonica
Lsat_1_v5_gn_3_79360 Lactuca sativa
Lsat_1_v5_gn_9_86101 Lactuca sativa
Manes.09G167500 Manihot esculenta
Manes.12G089750 Manihot esculenta
Mapoly0046s0011 Marchantia polymorpha
Mapoly0054s0038 Marchantia polymorpha
MBI01_g40486_MAGBIO Magnolia biondii
MCO16G294 Micromonas commoda
MD02G1152800 Malus domestica
MD04G1205000 Malus domestica
MD15G1267200 Malus domestica
Medtr5g019600 Medicago truncatula
Medtr7g113480 Medicago truncatula
MELO3C004255.2 Cucumis melo
MELO3C007807.2 Cucumis melo
Migut.H00191 Erythranthe guttata
Migut.H01105 Erythranthe guttata
Migut.N02010 Erythranthe guttata
Migut.O00695 Erythranthe guttata
MSTRG.23552 Avicennia marina
Nitab4.5_0000137g0160 Nicotiana tabacum
Nitab4.5_0000628g0100 Nicotiana tabacum
Nitab4.5_0001100g0020 Nicotiana tabacum
Nitab4.5_0001279g0140 Nicotiana tabacum
Nitab4.5_0001726g0140 Nicotiana tabacum
Nitab4.5_0002753g0050 Nicotiana tabacum
Nitab4.5_0005541g0010 Nicotiana tabacum
Nitab4.5_0005541g0020 Nicotiana tabacum
Nn1g05088 Nelumbo nucifera
Nn4g25377 Nelumbo nucifera
Nn5g29518 Nelumbo nucifera
Oeu024217.1 Olea europaea
Oeu032564.2 Olea europaea
Oeu038298.1 Olea europaea
Oeu038299.1 Olea europaea
Oeu038916.2 Olea europaea
Oeu051832.1 Olea europaea
Os06g0664100 Oryza sativa ssp. japonica
Os07g0205700 Oryza sativa ssp. japonica
Os11g0539800 Oryza sativa ssp. japonica
Os11g0540100 Oryza sativa ssp. japonica
Peaxi162Scf00008g04311 Petunia axillaris
Peaxi162Scf00037g00515 Petunia axillaris
Peaxi162Scf00427g00311 Petunia axillaris
PGR031G1217 Punica granatum
PGR119G0349 Punica granatum
PGR119G0856 Punica granatum
PGSC0003DMG400004498 Solanum tuberosum
PGSC0003DMG400012681 Solanum tuberosum
PGSC0003DMG400024739 Solanum tuberosum
Phvul.002G027000 Phaseolus vulgaris
Phvul.006G091700 Phaseolus vulgaris
Potri.007G029700 Populus trichocarpa
Potri.007G030050 Populus trichocarpa
Potri.013G021400 Populus trichocarpa
Potri.018G145576 Populus trichocarpa
Potri.018G145584 Populus trichocarpa
Potri.T045100 Populus trichocarpa
Pp3c16_8880 Physcomitrium patens
Pp3c3_36580 Physcomitrium patens
PRCOL_00000656 Prasinoderma coloniale
PRCOL_00006329 Prasinoderma coloniale
Prupe.6G325100 Prunus persica
Prupe.7G149300 Prunus persica
Psat0s212g0160 Pisum sativum
Psat2g161360 Pisum sativum
PSO170G0344 Papaver somniferum
PSO170G4776 Papaver somniferum
PSO302G0037 Papaver somniferum
PSO700G0329 Papaver somniferum
QL03p007102 Quercus lobata
QL06p045271 Quercus lobata
QL11p053062 Quercus lobata
RcHm_v2.0_Chr2g0102281 Rosa chinensis
RcHm_v2.0_Chr2g0102301 Rosa chinensis
RcHm_v2.0_Chr3g0454961 Rosa chinensis
Rhsim08G0111900 Rhododendron simsii
Sabra07G0025700 Salix brachista
Sabra13G0023800 Salix brachista
SalBow3G2922 Salvia bowleyana
Sc09g0003170 Simmondsia chinensis
Sc16g0001160 Simmondsia chinensis
Sc18g0006810 Simmondsia chinensis
Sed0003201 Sechium edule
Sed0009119 Sechium edule
SEGI_00820 Sequoiadendron giganteum
SEGI_06193 Sequoiadendron giganteum
SEGI_09010 Sequoiadendron giganteum
SEGI_19135 Sequoiadendron giganteum
SEGI_23664 Sequoiadendron giganteum
SEGI_30693 Sequoiadendron giganteum
SGA_v2.0_scaffold33G13417 Striga asiatica
SGA_v2.0_scaffold81G26066 Striga asiatica
SHI08679 Sapria himalayana
SMO112G0016 Selaginella moellendorffii
SMO112G0028 Selaginella moellendorffii
SMO112G0111 Selaginella moellendorffii
SMO128G0008 Selaginella moellendorffii
SMO351G0053 Selaginella moellendorffii
SMO351G0187 Selaginella moellendorffii
SMO351G0295 Selaginella moellendorffii
SMO351G0654 Selaginella moellendorffii
SMO356G0527 Selaginella moellendorffii
SMO364G0093 Selaginella moellendorffii
SMO364G0707 Selaginella moellendorffii
SMO364G0799 Selaginella moellendorffii
Solyc01g099110.4 Solanum lycopersicum
Solyc02g062970.3 Solanum lycopersicum
Solyc02g085640.4 Solanum lycopersicum
Solyc02g085650.4 Solanum lycopersicum
Sopen01g042670 Solanum pennellii
Sopen02g014020 Solanum pennellii
Sopen02g030310 Solanum pennellii
Sopen02g030330 Solanum pennellii
Sopen12g011800 Solanum pennellii
Sp3g04230 Schrenkiella parvula
Sp7g34420 Schrenkiella parvula
TAR365G0755 Trochodendron aralioides
TAR381G0417 Trochodendron aralioides
TAR628G0328 Trochodendron aralioides
THA.LOC104807551 Tarenaya hassleriana
THA.LOC104818700 Tarenaya hassleriana
Thecc.01G040300 Theobroma cacao
Thecc.05G302600 Theobroma cacao
Thhalv10020169m.g Eutrema salsugineum
Thhalv10024649m.g Eutrema salsugineum
TPR.G25831 Trifolium pratense
TPR.G33217 Trifolium pratense
TPR.G35863 Trifolium pratense
TWI36G0870 Tripterygium wilfordii
TWI53G0710 Tripterygium wilfordii
TWI53G1069 Tripterygium wilfordii
TWI56G0765 Tripterygium wilfordii
TWI73G0939 Tripterygium wilfordii
unitig_52.g17596 Utricularia gibba
unitig_62.g23445 Utricularia gibba
unitig_746.g26853 Utricularia gibba
unitig_746.g26854 Utricularia gibba
vmacro05014 Vaccinium macrocarpon
vmacro05015 Vaccinium macrocarpon
vmacro17864 Vaccinium macrocarpon
vmacro23278 Vaccinium macrocarpon
VMungo0540G1471 Vigna mungo
VMungo1215G0358 Vigna mungo
Zm00001eb113600 Zea mays
Zm00001eb302980 Zea mays

User provided reference genes

Program Settings