Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15040 Brassica napus
A01p17210 Brassica napus
A03p32570 Brassica napus
A03p54680 Brassica napus
A03p56330 Brassica napus
A05p44590 Brassica napus
A08p22000 Brassica napus
Aa31LG3G320 Aethionema arabicum
Aa31LG5G10510 Aethionema arabicum
Aa31LG6G6940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3876 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2238 Anthoceros agrestis
Actinidia03060 Actinidia chinensis
Actinidia13087 Actinidia chinensis
Actinidia23021 Actinidia chinensis
Actinidia38277 Actinidia chinensis
Ah.01g005870 Amaranthus hybridus
Ah.01g021920 Amaranthus hybridus
AL3G10810 Arabidopsis lyrata
AL7G27050 Arabidopsis lyrata
AL7G29650 Arabidopsis lyrata
Aqoxy1G01244 Aquilegia oxysepala
Aqoxy5G03462 Aquilegia oxysepala
Aqoxy7G00258 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.64HYJD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CE6ZYU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DXQS2Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H7D190 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SKYN7R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZM0CN1 Arachis hypogaea
AT3G01390 Arabidopsis thaliana
AT4G23710 Arabidopsis thaliana
AT4G25950 Arabidopsis thaliana
ATR0115G021 Amborella trichopoda
Atru.chr12.766 Acer truncatum
Atru.chr13.2378 Acer truncatum
Atru.chr8.1871 Acer truncatum
AUR62022187 Chenopodium quinoa
AUR62031892 Chenopodium quinoa
BcaB03g12402 Brassica carinata
BcaB04g21414 Brassica carinata
BcaC01g04520 Brassica carinata
BcaC05g30467 Brassica carinata
BcaC06g32780 Brassica carinata
BcaC08g43397 Brassica carinata
BcaC09g47666 Brassica carinata
BcaC09g50730 Brassica carinata
BcaC09g50952 Brassica carinata
BcaNung01081 Brassica carinata
BcaNung03184 Brassica carinata
BcaNung03771 Brassica carinata
BNapus_Darmor_BZH_scaffold_133p00080 Brassica napus
BolC1t01817H Brassica oleracea
BolC1t02074H Brassica oleracea
BolC5t35146H Brassica oleracea
BolC7t45800H Brassica oleracea
BolC7t45945H Brassica oleracea
BraA01t01444Z Brassica rapa
BraA01t01677Z Brassica rapa
BraA03t12426Z Brassica rapa
BraA03t14535Z Brassica rapa
BraA03t14703Z Brassica rapa
BraA05t23197Z Brassica rapa
C01p18910 Brassica napus
C01p21540 Brassica napus
C03p39650 Brassica napus
C06p07650 Brassica napus
C07p01320 Brassica napus
C07p53020 Brassica napus
C07p54570 Brassica napus
C09p75180 Brassica napus
CAN.G675.6 Capsicum annuum
CAN.G694.78 Capsicum annuum
CAN.G922.2 Capsicum annuum
CANSAT25G3719 Cannabis sativa
CANSAT80G0010 Cannabis sativa
CARHR075580 Cardamine hirsuta
CARHR231100 Cardamine hirsuta
CARHR233460 Cardamine hirsuta
Carub.0003s0070 Capsella rubella
Carub.0007s1500 Capsella rubella
Carub.0007s1741 Capsella rubella
Ca_08843_v3 Cicer arietinum L.
Ca_12556_v3 Cicer arietinum L.
CBR_g46903 Chara braunii
Cc06_g03890 Coffea canephora
Cc09_g02080 Coffea canephora
Cc10_g10250 Coffea canephora
CDE07G1146 Ceratophyllum demersum
Cfa012933 Carpinus fangiana
Cfa017544 Carpinus fangiana
Cfa017549 Carpinus fangiana
Cfa021507 Carpinus fangiana
Ciclev10002904m.g Citrus clementina
Ciclev10013168m.g Citrus clementina
Ciclev10033446m.g Citrus clementina
CiPaw.01G273200 Carya illinoinensis
CiPaw.07G236700 Carya illinoinensis
CiPaw.10G137000 Carya illinoinensis
ClCG08G016630 Citrullus lanatus
ClCG10G020340 Citrullus lanatus
COL.COLO4_24792 Corchorus olitorius
COL.COLO4_27031 Corchorus olitorius
COL.COLO4_27032 Corchorus olitorius
Cpa.g.sc666.2 Carica papaya
Cre11.g468550 Chlamydomonas reinhardtii
CsaV3_2G025980 Cucumis sativus L.
CsaV3_3G035760 Cucumis sativus L.
CSS0007966 Camellia sinensis var. sinensis
CSS0013304 Camellia sinensis var. sinensis
CSS0015497 Camellia sinensis var. sinensis
CSS0017446 Camellia sinensis var. sinensis
CSS0026294 Camellia sinensis var. sinensis
CSS0030380 Camellia sinensis var. sinensis
CSS0037773 Camellia sinensis var. sinensis
CSS0038940 Camellia sinensis var. sinensis
CSS0042324 Camellia sinensis var. sinensis
DCAR_006442 Daucus carota
DCAR_028564 Daucus carota
Dinv11777 Davidia involucrata
Dinv31327 Davidia involucrata
Dinv37281 Davidia involucrata
Duzib093G1114 Durio zibethinus
Duzib114G0365 Durio zibethinus
Duzib128G1663 Durio zibethinus
Duzib128G1792 Durio zibethinus
Duzib177G1136 Durio zibethinus
ECA233G3489 Erigeron canadensis
ECA238G0100 Erigeron canadensis
ECA238G0156 Erigeron canadensis
EL10Ac1g00113 Beta vulgaris
EL10Ac4g07960 Beta vulgaris
Eucgr.F04118 Eucalyptus grandis
Eucgr.J01088 Eucalyptus grandis
Eucgr.J01274 Eucalyptus grandis
Eucgr.K03243 Eucalyptus grandis
FAN01G0367 Fragaria x ananassa
FAN02G4246 Fragaria x ananassa
FAN08G0995 Fragaria x ananassa
FAN09G1648 Fragaria x ananassa
FAN10G2507 Fragaria x ananassa
FAN10G4087 Fragaria x ananassa
FAN14G4549 Fragaria x ananassa
FAN18G0177 Fragaria x ananassa
FvH4_5g32250 Fragaria vesca
FvH4_6g15780 Fragaria vesca
FvH4_7g19640 Fragaria vesca
Glyma.03G180700 Glycine max
Glyma.09G242300 Glycine max
Glyma.10G052700 Glycine max
Glyma.13G139900 Glycine max
Glyma.18G253300 Glycine max
Gohir.A02G087000 Gossypium hirsutum
Gohir.A04G074600 Gossypium hirsutum
Gohir.A13G024100 Gossypium hirsutum
Gohir.D02G101600 Gossypium hirsutum
Gohir.D04G113400 Gossypium hirsutum
Gohir.D13G023000 Gossypium hirsutum
Gorai.005G115000 Gossypium raimondii
Gorai.009G418200 Gossypium raimondii
Gorai.013G025700 Gossypium raimondii
GSVIVG01001791001 Vitis vinifera
GSVIVG01001792001 Vitis vinifera
GSVIVG01001799001 Vitis vinifera
GSVIVG01005727001 Vitis vinifera
GSVIVG01012803001 Vitis vinifera
GSVIVG01016283001 Vitis vinifera
GSVIVG01025678001 Vitis vinifera
HanXRQChr07g0195191 Helianthus annuus
HanXRQChr07g0195541 Helianthus annuus
HanXRQChr08g0218921 Helianthus annuus
HanXRQChr09g0249671 Helianthus annuus
HanXRQChr12g0370511 Helianthus annuus
HanXRQChr13g0398721 Helianthus annuus
HanXRQChr14g0450841 Helianthus annuus
HanXRQChr14g0454391 Helianthus annuus
HanXRQChr15g0483031 Helianthus annuus
HanXRQChr15g0496641 Helianthus annuus
HanXRQChr16g0516001 Helianthus annuus
Haze_16896 Corylus avellana
Haze_20600 Corylus avellana
Haze_20602 Corylus avellana
Haze_21288 Corylus avellana
Hma1.2p1_0651F.1_g195650 Hydrangea macrophylla
Hma1.2p1_1004F.1_g246840 Hydrangea macrophylla
HPP92_021449 Vanilla planifolia
HPP92_021864 Vanilla planifolia
Hund00677 Selenicereus undatus
Hund06658 Selenicereus undatus
Lalb_Chr02g0156171 Lupinus albus
Lalb_Chr06g0171511 Lupinus albus
Lalb_Chr19g0125571 Lupinus albus
Lalb_Chr19g0126571 Lupinus albus
Lalb_Chr21g0314801 Lupinus albus
Lj1A914T40 Lonicera japonica
Lj1g0006715 Lotus japonicus
Lj1g0010346 Lotus japonicus
Lj5g0013216 Lotus japonicus
Lsat_1_v5_gn_2_108901 Lactuca sativa
Lsat_1_v5_gn_2_114260 Lactuca sativa
Lsat_1_v5_gn_9_69300 Lactuca sativa
Manes.02G196400 Manihot esculenta
Manes.07G101100 Manihot esculenta
Manes.09G068812 Manihot esculenta
Manes.10G045500 Manihot esculenta
Mapoly0006s0191 Marchantia polymorpha
Mapoly0030s0104 Marchantia polymorpha
MBI07_g19313_MAGBIO Magnolia biondii
MBI15_g19326_MAGBIO Magnolia biondii
MCO07G415 Micromonas commoda
MD04G1098400 Malus domestica
MD08G1220000 Malus domestica
MD12G1119300 Malus domestica
MD15G1410200 Malus domestica
Medtr1g064540 Medicago truncatula
Medtr7g007770 Medicago truncatula
Medtr7g101170 Medicago truncatula
MELO3C009336.2 Cucumis melo
MELO3C010790.2 Cucumis melo
Migut.C01296 Erythranthe guttata
Migut.F00924 Erythranthe guttata
MSTRG.25463 Avicennia marina
MSTRG.27514 Avicennia marina
MSTRG.9117 Avicennia marina
Nitab4.5_0000118g0150 Nicotiana tabacum
Nitab4.5_0000331g0030 Nicotiana tabacum
Nitab4.5_0000476g0140 Nicotiana tabacum
Nitab4.5_0000575g0220 Nicotiana tabacum
Nitab4.5_0002032g0020 Nicotiana tabacum
Nitab4.5_0008273g0010 Nicotiana tabacum
Nitab4.5_0010934g0030 Nicotiana tabacum
Oeu033846.1 Olea europaea
Oeu033847.1 Olea europaea
Oeu043943.2 Olea europaea
Oeu044196.1 Olea europaea
Oeu044492.1 Olea europaea
Oeu064072.1 Olea europaea
Os04g0601700 Oryza sativa ssp. japonica
Peaxi162Scf00011g00744 Petunia axillaris
Peaxi162Scf00156g01212 Petunia axillaris
Peaxi162Scf00809g00422 Petunia axillaris
PGR044G1961 Punica granatum
PGR102G2617 Punica granatum
PGR142G4474 Punica granatum
PGSC0003DMG400023464 Solanum tuberosum
PGSC0003DMG400024389 Solanum tuberosum
PGSC0003DMG400029692 Solanum tuberosum
Phvul.001G176900 Phaseolus vulgaris
Phvul.002G108100 Phaseolus vulgaris
Phvul.007G220600 Phaseolus vulgaris
Phvul.008G045800 Phaseolus vulgaris
Potri.008G040300 Populus trichocarpa
Potri.010G222000 Populus trichocarpa
Potri.013G108300 Populus trichocarpa
Potri.019G080700 Populus trichocarpa
Potri.019G133701 Populus trichocarpa
Pp3c15_4630 Physcomitrium patens
Pp3c9_8730 Physcomitrium patens
PRCOL_00000675 Prasinoderma coloniale
Prupe.1G552300 Prunus persica
Prupe.3G038600 Prunus persica
Prupe.6G237200 Prunus persica
Psat0s1820g0120 Pisum sativum
Psat3g195800 Pisum sativum
Psat6g066800 Pisum sativum
PSO063G4326 Papaver somniferum
PSO063G6788 Papaver somniferum
PSO339G0004 Papaver somniferum
PSO339G0839 Papaver somniferum
PSO384G1007 Papaver somniferum
PSO782G2339 Papaver somniferum
QL02p047494 Quercus lobata
QL07p044586 Quercus lobata
QL08p056022 Quercus lobata
RcHm_v2.0_Chr1g0363451 Rosa chinensis
RcHm_v2.0_Chr3g0469521 Rosa chinensis
RcHm_v2.0_Chr7g0228271 Rosa chinensis
RcHm_v2.0_Chr7g0228351 Rosa chinensis
Rhsim06G0114300 Rhododendron simsii
Rhsim12G0201700 Rhododendron simsii
Sabra10G0171800 Salix brachista
Sabra13G0093400 Salix brachista
SalBow6G5780 Salvia bowleyana
SalBow7G3536 Salvia bowleyana
Sc06g0001760 Simmondsia chinensis
Sc20g0001890 Simmondsia chinensis
Sed0015633 Sechium edule
Sed0020031 Sechium edule
Sed0027725 Sechium edule
SEGI_18541 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10575 Striga asiatica
SGA_v2.0_scaffold62G21357 Striga asiatica
SMO115G0054 Selaginella moellendorffii
Solyc02g078190.3 Solanum lycopersicum
Solyc04g049330.3 Solanum lycopersicum
Solyc05g056020.3 Solanum lycopersicum
Sopen02g023050 Solanum pennellii
Sopen04g019240 Solanum pennellii
Sopen05g034430 Solanum pennellii
Sp3g00680 Schrenkiella parvula
Sp7g21640 Schrenkiella parvula
Sp7g23960 Schrenkiella parvula
TAR376G0785 Trochodendron aralioides
TAR376G1240 Trochodendron aralioides
TAR633G2266 Trochodendron aralioides
TAR636G0126 Trochodendron aralioides
TAR636G3584 Trochodendron aralioides
THA.LOC104802409 Tarenaya hassleriana
THA.LOC104809880 Tarenaya hassleriana
THA.LOC104811776 Tarenaya hassleriana
THA.LOC104827297 Tarenaya hassleriana
Thecc.05G059900 Theobroma cacao
Thecc.08G187800 Theobroma cacao
Thecc.10G073000 Theobroma cacao
Thhalv10022085m.g Eutrema salsugineum
Thhalv10026607m.g Eutrema salsugineum
Thhalv10026625m.g Eutrema salsugineum
TPR.G12212 Trifolium pratense
TPR.G14901 Trifolium pratense
TPR.G18273 Trifolium pratense
TPR.G21202 Trifolium pratense
TWI14G1241 Tripterygium wilfordii
TWI15G0693 Tripterygium wilfordii
TWI23G0663 Tripterygium wilfordii
TWI81G0693 Tripterygium wilfordii
unitig_32.g11183 Utricularia gibba
unitig_37.g12327 Utricularia gibba
vmacro04312 Vaccinium macrocarpon
vmacro16175 Vaccinium macrocarpon
VMungo0720G0478 Vigna mungo
VMungo1383G1859 Vigna mungo
VMungo1383G2333 Vigna mungo
Zm00001eb095390 Zea mays
Zm00001eb303030 Zea mays

User provided reference genes

Program Settings