Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p45670 Brassica napus
A03p47960 Brassica napus
A07p04840 Brassica napus
A08p22470 Brassica napus
A09p43930 Brassica napus
Aa31LG4G18950 Aethionema arabicum
Aa31LG6G13730 Aethionema arabicum
Aa31LG6G13750 Aethionema arabicum
Aa31LG6G13760 Aethionema arabicum
Aa31LG8G13480 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2547 Anthoceros agrestis
Actinidia27920 Actinidia chinensis
Actinidia30989 Actinidia chinensis
Ah.01g006530 Amaranthus hybridus
Ah.01g019790 Amaranthus hybridus
Ah.03g139750 Amaranthus hybridus
AL4G13670 Arabidopsis lyrata
AL5G31110 Arabidopsis lyrata
AL7G14020 Arabidopsis lyrata
Aqoxy5G01746 Aquilegia oxysepala
Aqoxy6G00961 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5MZ6CB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7UA8HU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FYJN4C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M01PWB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NF3J5W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TGKF8B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V054J5 Arachis hypogaea
AT2G15970 Arabidopsis thaliana
AT2G23680 Arabidopsis thaliana
AT3G50830 Arabidopsis thaliana
AT4G37220 Arabidopsis thaliana
ATR0733G021 Amborella trichopoda
ATR0733G127 Amborella trichopoda
Atru.chr3.500 Acer truncatum
Atru.chr3.501 Acer truncatum
Atru.chr5.2905 Acer truncatum
AUR62003230 Chenopodium quinoa
AUR62011391 Chenopodium quinoa
AUR62016670 Chenopodium quinoa
AUR62027244 Chenopodium quinoa
BcaB01g00577 Brassica carinata
BcaB08g34632 Brassica carinata
BcaC01g00435 Brassica carinata
BcaC01g03044 Brassica carinata
BcaC06g33078 Brassica carinata
BcaC06g33325 Brassica carinata
BcaC06g36104 Brassica carinata
BcaC07g39547 Brassica carinata
BolC3t17958H Brassica oleracea
BolC3t20225H Brassica oleracea
BolC7t41198H Brassica oleracea
BolC7t45116H Brassica oleracea
BolC8t50221H Brassica oleracea
BraA03t13699Z Brassica rapa
BraA03t13904Z Brassica rapa
BraA07t28275Z Brassica rapa
BraA08t34202Z Brassica rapa
BraA09t39850Z Brassica rapa
C01p29580 Brassica napus
C03p56760 Brassica napus
C03p79780 Brassica napus
C07p07800 Brassica napus
C07p45970 Brassica napus
C08p26030 Brassica napus
CAN.G322.94 Capsicum annuum
CAN.G93.3 Capsicum annuum
CANSAT01G1886 Cannabis sativa
CANSAT01G3111 Cannabis sativa
CANSAT25G0566 Cannabis sativa
CARHR106290 Cardamine hirsuta
CARHR114670 Cardamine hirsuta
CARHR114680 Cardamine hirsuta
CARHR114690 Cardamine hirsuta
CARHR160370 Cardamine hirsuta
CARHR245280 Cardamine hirsuta
Carub.0003s2984 Capsella rubella
Carub.0004s0289 Capsella rubella
Carub.0005s1721 Capsella rubella
Carub.0007s0341 Capsella rubella
Ca_20828_v3 Cicer arietinum L.
Ca_22225_v3 Cicer arietinum L.
Cc02_g18110 Coffea canephora
Cc07_g05360 Coffea canephora
CDE04G0147 Ceratophyllum demersum
CDE07G0183 Ceratophyllum demersum
CDE09G0378 Ceratophyllum demersum
Cfa004235 Carpinus fangiana
Cfa004959 Carpinus fangiana
Ciclev10026511m.g Citrus clementina
Ciclev10026644m.g Citrus clementina
Ciclev10029293m.g Citrus clementina
CiPaw.01G029500 Carya illinoinensis
CiPaw.01G031600 Carya illinoinensis
CiPaw.02G013300 Carya illinoinensis
CiPaw.05G059400 Carya illinoinensis
CiPaw.06G138900 Carya illinoinensis
ClCG01G016380 Citrullus lanatus
ClCG09G017740 Citrullus lanatus
COL.COLO4_17785 Corchorus olitorius
COL.COLO4_22150 Corchorus olitorius
COL.COLO4_22174 Corchorus olitorius
COL.COLO4_22175 Corchorus olitorius
Cpa.g.sc15.57 Carica papaya
Cpa.g.sc62.89 Carica papaya
CsaV3_2G014340 Cucumis sativus L.
CsaV3_6G042690 Cucumis sativus L.
CSS0005853 Camellia sinensis var. sinensis
CSS0010024 Camellia sinensis var. sinensis
CSS0029243 Camellia sinensis var. sinensis
DCAR_001601 Daucus carota
DCAR_010947 Daucus carota
DCAR_029005 Daucus carota
Dinv17709 Davidia involucrata
Dinv26779 Davidia involucrata
Dinv39926 Davidia involucrata
Dinv40999 Davidia involucrata
Dinv42104 Davidia involucrata
Duzib132G1142 Durio zibethinus
Duzib147G1176 Durio zibethinus
Duzib187G0124 Durio zibethinus
Duzib248G1406 Durio zibethinus
ECA236G2929 Erigeron canadensis
EL10Ac6g14849 Beta vulgaris
EL10Ac9g21783 Beta vulgaris
Eucgr.G00491 Eucalyptus grandis
Eucgr.G00492 Eucalyptus grandis
Eucgr.G01545 Eucalyptus grandis
Eucgr.I01024 Eucalyptus grandis
Eucgr.I01231 Eucalyptus grandis
Eucgr.I02482 Eucalyptus grandis
FAN07G1674 Fragaria x ananassa
FAN12G1890 Fragaria x ananassa
FAN15G0176 Fragaria x ananassa
FAN15G2958 Fragaria x ananassa
FAN19G0813 Fragaria x ananassa
FAN20G2163 Fragaria x ananassa
FAN23G1734 Fragaria x ananassa
FAN23G2823 Fragaria x ananassa
FAN24G2703 Fragaria x ananassa
FAN26G0045 Fragaria x ananassa
FAN27G1091 Fragaria x ananassa
FAN28G2057 Fragaria x ananassa
FvH4_1g14181 Fragaria vesca
FvH4_1g14252 Fragaria vesca
FvH4_1g14460 Fragaria vesca
FvH4_2g07440 Fragaria vesca
Glyma.02G061300 Glycine max
Glyma.11G122600 Glycine max
Glyma.12G047500 Glycine max
Glyma.16G143700 Glycine max
Gohir.A04G129400 Gossypium hirsutum
Gohir.A11G044500 Gossypium hirsutum
Gohir.A11G044900 Gossypium hirsutum
Gohir.A12G030600 Gossypium hirsutum
Gohir.D04G174500 Gossypium hirsutum
Gohir.D11G048000 Gossypium hirsutum
Gohir.D11G048400 Gossypium hirsutum
Gohir.D12G041800 Gossypium hirsutum
Gorai.007G051900 Gossypium raimondii
Gorai.008G043800 Gossypium raimondii
Gorai.008G070300 Gossypium raimondii
Gorai.012G164000 Gossypium raimondii
GSVIVG01003772001 Vitis vinifera
GSVIVG01019037001 Vitis vinifera
GSVIVG01031890001 Vitis vinifera
HanXRQChr04g0101111 Helianthus annuus
HanXRQChr16g0504881 Helianthus annuus
Haze_15162 Corylus avellana
Hma1.2p1_0261F.1_g104900 Hydrangea macrophylla
Hma1.2p1_0584F.1_g183310 Hydrangea macrophylla
Hma1.2p1_0739F.1_g211260 Hydrangea macrophylla
HPP92_012491 Vanilla planifolia
HPP92_018820 Vanilla planifolia
Hund00297 Selenicereus undatus
Hund00304 Selenicereus undatus
Hund06208 Selenicereus undatus
Hund14130 Selenicereus undatus
Lalb_Chr01g0002921 Lupinus albus
Lalb_Chr03g0025921 Lupinus albus
Lalb_Chr05g0227141 Lupinus albus
Lalb_Chr05g0227151 Lupinus albus
Lalb_Chr09g0322821 Lupinus albus
Lalb_Chr09g0322831 Lupinus albus
Lalb_Chr10g0095361 Lupinus albus
Lj2g0013850 Lotus japonicus
Lj3g0019361 Lotus japonicus
Lj4C135T10 Lonicera japonica
Lj4E133T0 Lonicera japonica
Lj4g0022775 Lotus japonicus
Lj7A14T60 Lonicera japonica
Lj9C365T7 Lonicera japonica
Lju41P26T18 Lonicera japonica
Lsat_1_v5_gn_4_179261 Lactuca sativa
Lsat_1_v5_gn_7_88540 Lactuca sativa
Lsat_1_v5_gn_7_88560 Lactuca sativa
Lsat_1_v5_gn_7_88580 Lactuca sativa
Lsat_1_v5_gn_8_149780 Lactuca sativa
Lsat_1_v5_gn_9_9720 Lactuca sativa
Manes.01G056750 Manihot esculenta
Manes.09G119850 Manihot esculenta
Manes.12G097300 Manihot esculenta
Manes.13G132500 Manihot esculenta
Manes.13G135100 Manihot esculenta
Manes.17G097300 Manihot esculenta
Manes.18G141904 Manihot esculenta
Mapoly0067s0083 Marchantia polymorpha
MBI16_g29180_MAGBIO Magnolia biondii
MBI16_g31344_MAGBIO Magnolia biondii
MBI16_g36195_MAGBIO Magnolia biondii
MBI16_g45776_MAGBIO Magnolia biondii
MD00G1150100 Malus domestica
MD00G1150200 Malus domestica
MD10G1085600 Malus domestica
MD15G1270400 Malus domestica
MD15G1273000 Malus domestica
Medtr1g034340 Medicago truncatula
Medtr1g034350 Medicago truncatula
Medtr4g049450 Medicago truncatula
Medtr4g068510 Medicago truncatula
Medtr4g068520 Medicago truncatula
Medtr8g078880 Medicago truncatula
MELO3C007508.2 Cucumis melo
MELO3C021940.2 Cucumis melo
Migut.B00285 Erythranthe guttata
Migut.H00504 Erythranthe guttata
MSTRG.20118 Avicennia marina
MSTRG.2922 Avicennia marina
Nitab4.5_0000090g0130 Nicotiana tabacum
Nitab4.5_0002126g0080 Nicotiana tabacum
Nitab4.5_0003281g0090 Nicotiana tabacum
Nitab4.5_0003816g0100 Nicotiana tabacum
Nn5g29433 Nelumbo nucifera
Oeu020619.1 Olea europaea
Oeu027597.1 Olea europaea
Oeu032915.1 Olea europaea
Oeu043824.1 Olea europaea
Oeu049322.1 Olea europaea
Os03g0767800 Oryza sativa ssp. japonica
Peaxi162Scf00016g01135 Petunia axillaris
Peaxi162Scf00019g02116 Petunia axillaris
PGR042G2478 Punica granatum
PGR102G2744 Punica granatum
PGR119G0580 Punica granatum
PGR119G0929 Punica granatum
PGSC0003DMG400002745 Solanum tuberosum
PGSC0003DMG400025160 Solanum tuberosum
Phvul.003G249700 Phaseolus vulgaris
Phvul.011G049500 Phaseolus vulgaris
Potri.004G149100 Populus trichocarpa
Potri.007G032000 Populus trichocarpa
Potri.007G033801 Populus trichocarpa
Potri.009G109800 Populus trichocarpa
Pp3c10_12250 Physcomitrium patens
Pp3c10_22800 Physcomitrium patens
Pp3c20_22310 Physcomitrium patens
Pp3c3_23240 Physcomitrium patens
Prupe.7G145800 Prunus persica
Prupe.7G147700 Prunus persica
Prupe.8G109700 Prunus persica
Psat4g179320 Pisum sativum
Psat7g207120 Pisum sativum
PSO170G6758 Papaver somniferum
PSO541G2738 Papaver somniferum
PSO541G2850 Papaver somniferum
PSO541G3259 Papaver somniferum
PSO541G5693 Papaver somniferum
PSO675G3002 Papaver somniferum
PSO675G5385 Papaver somniferum
PSO675G6537 Papaver somniferum
PSO675G9236 Papaver somniferum
PSO700G0373 Papaver somniferum
QL06p044294 Quercus lobata
QL06p044648 Quercus lobata
QL11p039559 Quercus lobata
RcHm_v2.0_Chr2g0102851 Rosa chinensis
RcHm_v2.0_Chr2g0103221 Rosa chinensis
RcHm_v2.0_Chr6g0261051 Rosa chinensis
RcHm_v2.0_Chr6g0261111 Rosa chinensis
RcHm_v2.0_Chr6g0261481 Rosa chinensis
Rhsim05G0078100 Rhododendron simsii
Rhsim08G0109600 Rhododendron simsii
Sabra07G0027800 Salix brachista
Sabra07G0029500 Salix brachista
SalBow1G8216 Salvia bowleyana
SalBow6G3142 Salvia bowleyana
Sc03g0000990 Simmondsia chinensis
Sc08g0000250 Simmondsia chinensis
Sc16g0001200 Simmondsia chinensis
Sed0007426 Sechium edule
Sed0019117 Sechium edule
SEGI_08025 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07200 Striga asiatica
SGA_v2.0_scaffold204G41630 Striga asiatica
SGA_v2.0_scaffold58G20589 Striga asiatica
SMO367G1279 Selaginella moellendorffii
Solyc01g109170.3 Solanum lycopersicum
Solyc02g065380.3 Solanum lycopersicum
Sopen01g051370 Solanum pennellii
Sopen02g015590 Solanum pennellii
Sp3g29270 Schrenkiella parvula
Sp4g02650 Schrenkiella parvula
Sp4g02655 Schrenkiella parvula
Sp5g11390 Schrenkiella parvula
Sp7g34570 Schrenkiella parvula
TAR365G1068 Trochodendron aralioides
TAR376G1124 Trochodendron aralioides
TAR381G1222 Trochodendron aralioides
TAR628G0364 Trochodendron aralioides
TAR628G0941 Trochodendron aralioides
THA.LOC104804363 Tarenaya hassleriana
THA.LOC104807566 Tarenaya hassleriana
THA.LOC104807567 Tarenaya hassleriana
THA.LOC104826725 Tarenaya hassleriana
Thecc.01G042900 Theobroma cacao
Thecc.01G045400 Theobroma cacao
Thecc.02G029600 Theobroma cacao
Thhalv10000336m.g Eutrema salsugineum
Thhalv10010733m.g Eutrema salsugineum
Thhalv10022862m.g Eutrema salsugineum
Thhalv10026271m.g Eutrema salsugineum
TPR.G11244 Trifolium pratense
TPR.G11443 Trifolium pratense
TPR.G18588 Trifolium pratense
TPR.G29888 Trifolium pratense
TWI09G0311 Tripterygium wilfordii
TWI09G0849 Tripterygium wilfordii
TWI31G0188 Tripterygium wilfordii
unitig_21.g20766 Utricularia gibba
unitig_62.g23405 Utricularia gibba
vmacro22672 Vaccinium macrocarpon
VMungo0251G2331 Vigna mungo
VMungo1127G2066 Vigna mungo
Zm00001eb058700 Zea mays

User provided reference genes

Program Settings