Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p26160 Brassica napus
A02p36010 Brassica napus
A05p31140 Brassica napus
A05p31150 Brassica napus
A06p40400 Brassica napus
A09p03760 Brassica napus
Aa31LG2G4500 Aethionema arabicum
Aa31LG2G4510 Aethionema arabicum
Aa31LG9G1760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.257 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2217 Anthoceros agrestis
Actinidia06068 Actinidia chinensis
Actinidia23575 Actinidia chinensis
Actinidia27488 Actinidia chinensis
Actinidia34797 Actinidia chinensis
Actinidia38882 Actinidia chinensis
Ah.10g031310 Amaranthus hybridus
Ah.12g065370 Amaranthus hybridus
Ah.12g065390 Amaranthus hybridus
AL5G18340 Arabidopsis lyrata
AL5G18390 Arabidopsis lyrata
AL5G18410 Arabidopsis lyrata
Aqoxy3G03264 Aquilegia oxysepala
Aqoxy3G03291 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.57V2RC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9ZMQ3R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EZF2RR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M50Q99 Arachis hypogaea
AT3G28700 Arabidopsis thaliana
AT3G28710 Arabidopsis thaliana
AT3G28715 Arabidopsis thaliana
ATR0706G077 Amborella trichopoda
ATR1120G150 Amborella trichopoda
Atru.chr8.1915 Acer truncatum
Atru.chr8.2689 Acer truncatum
AUR62031635 Chenopodium quinoa
AUR62031644 Chenopodium quinoa
AUR62038866 Chenopodium quinoa
AUR62038879 Chenopodium quinoa
BcaB04g19480 Brassica carinata
BcaB07g30124 Brassica carinata
BcaC02g09250 Brassica carinata
BcaC02g11495 Brassica carinata
BcaC03g17524 Brassica carinata
BcaC04g23865 Brassica carinata
BcaC05g28941 Brassica carinata
BcaC06g30901 Brassica carinata
BcaC06g33634 Brassica carinata
BcaC06g33635 Brassica carinata
BolC2t11546H Brassica oleracea
BolC2t11552H Brassica oleracea
BolC3t20150H Brassica oleracea
BolC4t25631H Brassica oleracea
BolC5t33816H Brassica oleracea
BolC6t36190H Brassica oleracea
BolC7t44281H Brassica oleracea
BolC8t50104H Brassica oleracea
BolC8t50105H Brassica oleracea
BolC9t53325H Brassica oleracea
BolC9t53326H Brassica oleracea
BraA01t04496Z Brassica rapa
BraA02t06070Z Brassica rapa
BraA02t08600Z Brassica rapa
BraA05t21956Z Brassica rapa
BraA06t26958Z Brassica rapa
BraA09t36012Z Brassica rapa
C02p54850 Brassica napus
C04p14730 Brassica napus
C04p40510 Brassica napus
C05p44890 Brassica napus
C06p11040 Brassica napus
C07p16020 Brassica napus
C07p16060 Brassica napus
C07p37650 Brassica napus
C08p24880 Brassica napus
C08p24890 Brassica napus
C08p31240 Brassica napus
C09p03940 Brassica napus
C09p03950 Brassica napus
CAN.G128.149 Capsicum annuum
CAN.G206.108 Capsicum annuum
CANSAT11G2018 Cannabis sativa
CANSAT64G2224 Cannabis sativa
CARHR040070 Cardamine hirsuta
CARHR151620 Cardamine hirsuta
CARHR151640 Cardamine hirsuta
CARHR286600 Cardamine hirsuta
Carub.0005s0723 Capsella rubella
Carub.0005s0724 Capsella rubella
Carub.0005s0725 Capsella rubella
Ca_04106_v3 Cicer arietinum L.
Ca_04115_v3 Cicer arietinum L.
Ca_19010_v3 Cicer arietinum L.
Ca_20945_v3 Cicer arietinum L.
CBR_g20375 Chara braunii
CBR_g20991 Chara braunii
CBR_g40650 Chara braunii
Cc01_g00810 Coffea canephora
CDE04G1714 Ceratophyllum demersum
CDE05G2812 Ceratophyllum demersum
CDE06G0436 Ceratophyllum demersum
Cfa007507 Carpinus fangiana
Cfa007519 Carpinus fangiana
Cfa024469 Carpinus fangiana
Cfa026330 Carpinus fangiana
Ciclev10011611m.g Citrus clementina
Ciclev10012084m.g Citrus clementina
CiPaw.03G029300 Carya illinoinensis
CiPaw.03G030400 Carya illinoinensis
CiPaw.04G019300 Carya illinoinensis
ClCG09G018410 Citrullus lanatus
ClCG10G014880 Citrullus lanatus
COL.COLO4_25163 Corchorus olitorius
COL.COLO4_25201 Corchorus olitorius
Cpa.g.sc14.35 Carica papaya
Cre02.g096400 Chlamydomonas reinhardtii
Cre03.g176250 Chlamydomonas reinhardtii
CsaV3_3G041630 Cucumis sativus L.
CsaV3_5G037870 Cucumis sativus L.
CSS0002033 Camellia sinensis var. sinensis
CSS0006137 Camellia sinensis var. sinensis
CSS0019148 Camellia sinensis var. sinensis
CSS0022239 Camellia sinensis var. sinensis
CSS0024221 Camellia sinensis var. sinensis
CSS0026364 Camellia sinensis var. sinensis
CSS0036057 Camellia sinensis var. sinensis
DCAR_006720 Daucus carota
DCAR_011153 Daucus carota
DCAR_011154 Daucus carota
Dinv06509 Davidia involucrata
Dinv11012 Davidia involucrata
Dinv25076 Davidia involucrata
Dinv33716 Davidia involucrata
Dinv33729 Davidia involucrata
Dinv33731 Davidia involucrata
Dinv34987 Davidia involucrata
Dinv34989 Davidia involucrata
Dinv40238 Davidia involucrata
Duzib147G0831 Durio zibethinus
Duzib187G1412 Durio zibethinus
ECA232G0063 Erigeron canadensis
ECA232G3528 Erigeron canadensis
ECA246G2943 Erigeron canadensis
EL10Ac2g02943 Beta vulgaris
EL10Ac2g03435 Beta vulgaris
Eucgr.I01925 Eucalyptus grandis
Eucgr.I02249 Eucalyptus grandis
Eucgr.J02136 Eucalyptus grandis
FAN02G2179 Fragaria x ananassa
FAN02G2692 Fragaria x ananassa
FAN05G4054 Fragaria x ananassa
FAN05G5323 Fragaria x ananassa
FAN09G1760 Fragaria x ananassa
FAN09G2614 Fragaria x ananassa
FAN14G2932 Fragaria x ananassa
FAN14G4702 Fragaria x ananassa
FvH4_6g49160 Fragaria vesca
FvH4_6g49351 Fragaria vesca
Glyma.09G240300 Glycine max
Glyma.11G099200 Glycine max
Glyma.18G256200 Glycine max
Gohir.A05G364200 Gossypium hirsutum
Gohir.A07G215700 Gossypium hirsutum
Gohir.A09G022100 Gossypium hirsutum
Gohir.D04G050500 Gossypium hirsutum
Gohir.D07G222700 Gossypium hirsutum
Gohir.D09G021300 Gossypium hirsutum
Gorai.001G257000 Gossypium raimondii
Gorai.006G025300 Gossypium raimondii
Gorai.012G056000 Gossypium raimondii
GSVIVG01011352001 Vitis vinifera
GSVIVG01021633001 Vitis vinifera
GSVIVG01032604001 Vitis vinifera
HanXRQChr09g0265611 Helianthus annuus
HanXRQChr15g0474171 Helianthus annuus
HanXRQChr17g0547421 Helianthus annuus
Haze_14570 Corylus avellana
Haze_14574 Corylus avellana
Haze_14586 Corylus avellana
Haze_26095 Corylus avellana
Haze_26410 Corylus avellana
Hma1.2p1_0423F.1_g150240 Hydrangea macrophylla
Hma1.2p1_0449F.1_g155170 Hydrangea macrophylla
Hma1.2p1_1232F.1_g268870 Hydrangea macrophylla
Hma1.2p1_1232F.1_g268880 Hydrangea macrophylla
Hma1.2p1_1232F.1_g268890 Hydrangea macrophylla
Hma1.2p1_2982F.1_g331260 Hydrangea macrophylla
HPP92_003669 Vanilla planifolia
HPP92_006462 Vanilla planifolia
HPP92_022922 Vanilla planifolia
HPP92_022934 Vanilla planifolia
HPP92_022944 Vanilla planifolia
Hund13234 Selenicereus undatus
Hund13245 Selenicereus undatus
Hund15632 Selenicereus undatus
Lalb_Chr02g0159521 Lupinus albus
Lalb_Chr02g0159571 Lupinus albus
Lalb_Chr19g0139461 Lupinus albus
Lalb_Chr21g0318931 Lupinus albus
Lj1g0025494 Lotus japonicus
Lj2A726T8 Lonicera japonica
Lj3g0011182 Lotus japonicus
Lj7A401T79 Lonicera japonica
Lsat_1_v5_gn_2_88741 Lactuca sativa
Lsat_1_v5_gn_3_102160 Lactuca sativa
Lsat_1_v5_gn_4_179920 Lactuca sativa
Lsat_1_v5_gn_8_159501 Lactuca sativa
Manes.17G020800 Manihot esculenta
Manes.17G022500 Manihot esculenta
Manes.17G022600 Manihot esculenta
Manes.17G022700 Manihot esculenta
Mapoly0006s0177 Marchantia polymorpha
Mapoly0027s0012 Marchantia polymorpha
Mapoly0140s0023 Marchantia polymorpha
MBI15_g37231_MAGBIO Magnolia biondii
MCO01G616 Micromonas commoda
MCO09G443 Micromonas commoda
MD09G1045900 Malus domestica
MD09G1048000 Malus domestica
MD17G1046800 Malus domestica
MD17G1048200 Malus domestica
Medtr4g075200 Medicago truncatula
Medtr5g075800 Medicago truncatula
Medtr7g009485 Medicago truncatula
Medtr7g009520 Medicago truncatula
Medtr7g009550 Medicago truncatula
Medtr7g009575 Medicago truncatula
Medtr7g009590 Medicago truncatula
MELO3C009887.2 Cucumis melo
MELO3C021973.2 Cucumis melo
Migut.H00896 Erythranthe guttata
Migut.K01329 Erythranthe guttata
Migut.K01334 Erythranthe guttata
Migut.K01335 Erythranthe guttata
MSTRG.15485 Avicennia marina
MSTRG.15488 Avicennia marina
MSTRG.3317 Avicennia marina
Nitab4.5_0000098g0050 Nicotiana tabacum
Nitab4.5_0000387g0100 Nicotiana tabacum
Nitab4.5_0000564g0320 Nicotiana tabacum
Nitab4.5_0002087g0050 Nicotiana tabacum
Nitab4.5_0002265g0270 Nicotiana tabacum
Nitab4.5_0013371g0010 Nicotiana tabacum
Nn1g04484 Nelumbo nucifera
Nn1g04485 Nelumbo nucifera
Nn3g17123 Nelumbo nucifera
Oeu033340.1 Olea europaea
Oeu050223.1 Olea europaea
Oeu060916.1 Olea europaea
Oeu060924.1 Olea europaea
Os01g0587000 Oryza sativa ssp. japonica
Os01g0588800 Oryza sativa ssp. japonica
Peaxi162Scf00061g02912 Petunia axillaris
Peaxi162Scf00129g00533 Petunia axillaris
Peaxi162Scf00163g00105 Petunia axillaris
PGR083G0481 Punica granatum
PGR142G1484 Punica granatum
PGSC0003DMG400001411 Solanum tuberosum
PGSC0003DMG400028218 Solanum tuberosum
Phvul.008G043300 Phaseolus vulgaris
Phvul.011G027550 Phaseolus vulgaris
Potri.017G077000 Populus trichocarpa
Potri.017G079200 Populus trichocarpa
Pp3c20_18840 Physcomitrium patens
Pp3c8_16780 Physcomitrium patens
Pp3c8_5810 Physcomitrium patens
PRCOL_00003698 Prasinoderma coloniale
Prupe.3G271000 Prunus persica
Prupe.3G272300 Prunus persica
Psat3g196680 Pisum sativum
Psat7g177520 Pisum sativum
PSO017G2769 Papaver somniferum
PSO478G2180 Papaver somniferum
PSO591G0496 Papaver somniferum
PSO832G0234 Papaver somniferum
QL02p080348 Quercus lobata
QL02p080802 Quercus lobata
RcHm_v2.0_Chr2g0169031 Rosa chinensis
RcHm_v2.0_Chr2g0169211 Rosa chinensis
RcHm_v2.0_Chr4g0431361 Rosa chinensis
RcHm_v2.0_Chr6g0297701 Rosa chinensis
Rhsim09G0146300 Rhododendron simsii
Rhsim09G0146500 Rhododendron simsii
RhsimUnG0055000 Rhododendron simsii
Sabra17G0069200 Salix brachista
Sabra17G0070300 Salix brachista
Sabra17G0070400 Salix brachista
SalBow1G4343 Salvia bowleyana
SalBow1G8169 Salvia bowleyana
Sc02g0007720 Simmondsia chinensis
Sc10g0003830 Simmondsia chinensis
Sed0005459 Sechium edule
Sed0008481 Sechium edule
Sed0013706 Sechium edule
Sed0024340 Sechium edule
SEGI_03019 Sequoiadendron giganteum
SGA_v2.0_scaffold236G43786 Striga asiatica
SGA_v2.0_scaffold30G12523 Striga asiatica
SGA_v2.0_scaffold30G12526 Striga asiatica
SHI04268 Sapria himalayana
SHI06812 Sapria himalayana
SHI06815 Sapria himalayana
SHI22231 Sapria himalayana
SMO137G0011 Selaginella moellendorffii
SMO200G0063 Selaginella moellendorffii
Solyc02g087640.3 Solanum lycopersicum
Solyc10g081530.2 Solanum lycopersicum
Sopen02g032390 Solanum pennellii
Sopen10g032040 Solanum pennellii
Sp2g17340 Schrenkiella parvula
Sp2g17353 Schrenkiella parvula
Sp2g17360 Schrenkiella parvula
TAR371G1229 Trochodendron aralioides
TAR374G0426 Trochodendron aralioides
TAR629G1922 Trochodendron aralioides
THA.LOC104805447 Tarenaya hassleriana
THA.LOC104823928 Tarenaya hassleriana
THA.LOC104823931 Tarenaya hassleriana
Thecc.04G074100 Theobroma cacao
Thecc.04G075700 Theobroma cacao
Thhalv10004119m.g Eutrema salsugineum
Thhalv10004497m.g Eutrema salsugineum
Thhalv10004498m.g Eutrema salsugineum
TPR.G17186 Trifolium pratense
TPR.G4258 Trifolium pratense
TWI32G0692 Tripterygium wilfordii
TWI32G1350 Tripterygium wilfordii
TWI34G1416 Tripterygium wilfordii
TWI60G1096 Tripterygium wilfordii
unitig_747.g21836 Utricularia gibba
unitig_748.g8436 Utricularia gibba
vmacro05739 Vaccinium macrocarpon
vmacro10254 Vaccinium macrocarpon
VMungo1127G2029 Vigna mungo
VMungo1383G3104 Vigna mungo
Zm00001eb160620 Zea mays
Zm00001eb357360 Zea mays
Zm00001eb357440 Zea mays

User provided reference genes

Program Settings