Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p07390 Brassica napus
A03p00450 Brassica napus
A04p29040 Brassica napus
A05p15880 Brassica napus
A10p16280 Brassica napus
A10p33560 Brassica napus
Aa31LG1G11720 Aethionema arabicum
Aa31LG1G22700 Aethionema arabicum
Aa31LG5G6950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2477 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2934 Anthoceros agrestis
Actinidia13810 Actinidia chinensis
Actinidia28523 Actinidia chinensis
Actinidia34438 Actinidia chinensis
Ah.01g014860 Amaranthus hybridus
Ah.08g220350 Amaranthus hybridus
AL4G24210 Arabidopsis lyrata
AL4G34880 Arabidopsis lyrata
AL6G11200 Arabidopsis lyrata
AL8G35400 Arabidopsis lyrata
Aqoxy1G00778 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DC1G4E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F2YI02 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H44KCV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IZ5QGV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KGY7JI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L1DWHY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P5QYP7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WADY44 Arachis hypogaea
AT2G29510 Arabidopsis thaliana
AT2G37930 Arabidopsis thaliana
AT5G01030 Arabidopsis thaliana
AT5G59020 Arabidopsis thaliana
ATR0210G038 Amborella trichopoda
Atru.chr10.1065 Acer truncatum
Atru.chr3.4048 Acer truncatum
Atru.chr8.2111 Acer truncatum
Atru.chr8.2153 Acer truncatum
AUR62001719 Chenopodium quinoa
AUR62020057 Chenopodium quinoa
AUR62043659 Chenopodium quinoa
BcaB01g03142 Brassica carinata
BcaB01g06079 Brassica carinata
BcaB01g06206 Brassica carinata
BcaB02g09235 Brassica carinata
BcaB02g10258 Brassica carinata
BcaB05g22469 Brassica carinata
BcaB08g36295 Brassica carinata
BcaC02g11922 Brassica carinata
BcaC03g14061 Brassica carinata
BcaNung02756 Brassica carinata
BcaNung04462 Brassica carinata
BcaNung06276 Brassica carinata
BcaNung06277 Brassica carinata
BolC2t07405H Brassica oleracea
BolC3t12635H Brassica oleracea
BolC4t22600H Brassica oleracea
BolC4t23661H Brassica oleracea
BolC4t28132H Brassica oleracea
BolC9t57990H Brassica oleracea
BolC9t60181H Brassica oleracea
BraA02t05818Z Brassica rapa
BraA03t09435Z Brassica rapa
BraA04t18376Z Brassica rapa
BraA05t19773Z Brassica rapa
BraA05t20501Z Brassica rapa
BraA06t26283Z Brassica rapa
BraA10t43710Z Brassica rapa
BraA10t45386Z Brassica rapa
C02p12940 Brassica napus
C03p00720 Brassica napus
C04p09950 Brassica napus
C04p21330 Brassica napus
C04p66280 Brassica napus
C09p51310 Brassica napus
C09p74480 Brassica napus
CAN.G394.90 Capsicum annuum
CAN.G978.10 Capsicum annuum
CANSAT35G0878 Cannabis sativa
CANSAT54G1355 Cannabis sativa
CARHR122840 Cardamine hirsuta
CARHR132480 Cardamine hirsuta
CARHR211360 Cardamine hirsuta
CARHR285250 Cardamine hirsuta
Carub.0004s1056 Capsella rubella
Carub.0004s1984 Capsella rubella
Carub.0006s0085 Capsella rubella
Carub.0008s1967 Capsella rubella
Ca_01299_v3 Cicer arietinum L.
Ca_07383_v3 Cicer arietinum L.
Ca_07590_v3 Cicer arietinum L.
Ca_20603_v3 Cicer arietinum L.
Cc01_g13590 Coffea canephora
Cc06_g01950 Coffea canephora
CDE02G0804 Ceratophyllum demersum
CDE03G0105 Ceratophyllum demersum
CDE03G0286 Ceratophyllum demersum
CDE04G2368 Ceratophyllum demersum
CDE09G0691 Ceratophyllum demersum
Cfa011622 Carpinus fangiana
Cfa017284 Carpinus fangiana
Cfa021594 Carpinus fangiana
Ciclev10010992m.g Citrus clementina
Ciclev10027780m.g Citrus clementina
CiPaw.09G203300 Carya illinoinensis
CiPaw.13G084600 Carya illinoinensis
CiPaw.14G063200 Carya illinoinensis
ClCG02G019830 Citrullus lanatus
ClCG10G021630 Citrullus lanatus
COL.COLO4_14665 Corchorus olitorius
COL.COLO4_19066 Corchorus olitorius
Cpa.g.sc112.98 Carica papaya
CsaV3_3G034380 Cucumis sativus L.
CsaV3_6G016550 Cucumis sativus L.
CSS0001565 Camellia sinensis var. sinensis
CSS0011961 Camellia sinensis var. sinensis
CSS0034229 Camellia sinensis var. sinensis
CSS0040166 Camellia sinensis var. sinensis
DCAR_005919 Daucus carota
DCAR_007411 Daucus carota
DCAR_010433 Daucus carota
DCAR_018935 Daucus carota
DCAR_024048 Daucus carota
DCAR_028800 Daucus carota
Dinv17071 Davidia involucrata
Dinv34314 Davidia involucrata
Dinv35536 Davidia involucrata
Dinv37104 Davidia involucrata
Dinv43015 Davidia involucrata
Dinv43082 Davidia involucrata
Duzib093G1868 Durio zibethinus
Duzib106G1990 Durio zibethinus
Duzib128G1722 Durio zibethinus
Duzib150G1633 Durio zibethinus
Duzib168G1880 Durio zibethinus
Duzib170G1069 Durio zibethinus
ECA236G1550 Erigeron canadensis
ECA247G1727 Erigeron canadensis
ECA247G2760 Erigeron canadensis
ECA248G0692 Erigeron canadensis
EL10Ac5g11567 Beta vulgaris
EL10Ac7g16093 Beta vulgaris
Eucgr.B01046 Eucalyptus grandis
Eucgr.B02746 Eucalyptus grandis
Eucgr.G02019 Eucalyptus grandis
Eucgr.J01956 Eucalyptus grandis
Eucgr.K03014 Eucalyptus grandis
FAN02G1777 Fragaria x ananassa
FAN05G2036 Fragaria x ananassa
FAN09G4161 Fragaria x ananassa
FAN11G2245 Fragaria x ananassa
FAN14G3305 Fragaria x ananassa
FAN16G2274 Fragaria x ananassa
FAN21G0046 Fragaria x ananassa
FvH4_3g37380 Fragaria vesca
FvH4_6g12500 Fragaria vesca
Glyma.01G107000 Glycine max
Glyma.03G073760 Glycine max
Glyma.07G141900 Glycine max
Glyma.13G339600 Glycine max
Glyma.15G034800 Glycine max
Glyma.18G192400 Glycine max
Gohir.A03G047000 Gossypium hirsutum
Gohir.A05G091500 Gossypium hirsutum
Gohir.A09G161900 Gossypium hirsutum
Gohir.D03G120200 Gossypium hirsutum
Gohir.D05G092400 Gossypium hirsutum
Gohir.D09G157500 Gossypium hirsutum
Gorai.003G126700 Gossypium raimondii
Gorai.006G179200 Gossypium raimondii
Gorai.009G094900 Gossypium raimondii
GSVIVG01024835001 Vitis vinifera
GSVIVG01034048001 Vitis vinifera
HanXRQChr01g0010961 Helianthus annuus
HanXRQChr02g0055971 Helianthus annuus
HanXRQChr04g0124621 Helianthus annuus
HanXRQChr05g0135171 Helianthus annuus
HanXRQChr06g0176671 Helianthus annuus
HanXRQChr06g0178901 Helianthus annuus
HanXRQChr08g0237571 Helianthus annuus
HanXRQChr10g0292611 Helianthus annuus
Haze_20909 Corylus avellana
Haze_24224 Corylus avellana
Hma1.2p1_0543F.1_g175370 Hydrangea macrophylla
Hma1.2p1_0671F.1_g200680 Hydrangea macrophylla
HPP92_006634 Vanilla planifolia
HPP92_019861 Vanilla planifolia
Hund03163 Selenicereus undatus
Hund08147 Selenicereus undatus
Hund18877 Selenicereus undatus
Lalb_Chr01g0003421 Lupinus albus
Lalb_Chr03g0042771 Lupinus albus
Lalb_Chr07g0193181 Lupinus albus
Lalb_Chr10g0096331 Lupinus albus
Lalb_Chr14g0372081 Lupinus albus
Lalb_Chr19g0138081 Lupinus albus
Lj1A144T51 Lonicera japonica
Lj1g0012416 Lotus japonicus
Lj2A1072T118 Lonicera japonica
Lj2C84T14 Lonicera japonica
Lj3g0004419 Lotus japonicus
Lj3g0013888 Lotus japonicus
Lj3g0020271 Lotus japonicus
Lsat_1_v5_gn_5_168201 Lactuca sativa
Lsat_1_v5_gn_8_72401 Lactuca sativa
Lsat_1_v5_gn_8_80761 Lactuca sativa
Lsat_1_v5_gn_9_25080 Lactuca sativa
Lsat_1_v5_gn_9_31200 Lactuca sativa
Lsat_1_v5_gn_9_96960 Lactuca sativa
Manes.01G166800 Manihot esculenta
Manes.02G124400 Manihot esculenta
Manes.09G099400 Manihot esculenta
Mapoly0069s0050 Marchantia polymorpha
MBI05_g10283_MAGBIO Magnolia biondii
MBI14_g25116_MAGBIO Magnolia biondii
MBI14_g45807_MAGBIO Magnolia biondii
MBI14_g45808_MAGBIO Magnolia biondii
MBI14_g45809_MAGBIO Magnolia biondii
MD03G1081200 Malus domestica
MD03G1081600 Malus domestica
MD04G1141700 Malus domestica
MD11G1084800 Malus domestica
MD12G1156300 Malus domestica
Medtr2g097850 Medicago truncatula
Medtr4g019900 Medicago truncatula
Medtr4g064997 Medicago truncatula
Medtr7g065880 Medicago truncatula
MELO3C009209.2 Cucumis melo
MELO3C025883.2 Cucumis melo
Migut.J00255 Erythranthe guttata
MSTRG.19048 Avicennia marina
MSTRG.5616 Avicennia marina
Nitab4.5_0000008g0260 Nicotiana tabacum
Nitab4.5_0000744g0060 Nicotiana tabacum
Nitab4.5_0000744g0100 Nicotiana tabacum
Nitab4.5_0000933g0090 Nicotiana tabacum
Nitab4.5_0002152g0010 Nicotiana tabacum
Nn2g11304 Nelumbo nucifera
Nn2g13549 Nelumbo nucifera
Oeu001826.2 Olea europaea
Oeu003409.1 Olea europaea
Oeu015007.2 Olea europaea
Oeu041632.1 Olea europaea
Oeu045622.1 Olea europaea
Oeu053868.1 Olea europaea
Os03g0267600 Oryza sativa ssp. japonica
Peaxi162Scf01058g00160 Petunia axillaris
Peaxi162Scf01302g00028 Petunia axillaris
PGR004G2380 Punica granatum
PGR102G0739 Punica granatum
PGR119G1807 Punica granatum
PGSC0003DMG400030342 Solanum tuberosum
PGSC0003DMG402020367 Solanum tuberosum
Phvul.008G112600 Phaseolus vulgaris
Phvul.010G005700 Phaseolus vulgaris
Phvul.L008743 Phaseolus vulgaris
Potri.001G246200 Populus trichocarpa
Potri.006G093600 Populus trichocarpa
Potri.009G039300 Populus trichocarpa
Potri.016G105500 Populus trichocarpa
Prupe.6G065800 Prunus persica
Prupe.6G267100 Prunus persica
Psat3g135040 Pisum sativum
Psat3g172800 Pisum sativum
Psat3g174640 Pisum sativum
Psat5g285880 Pisum sativum
Psat7g211920 Pisum sativum
Psat7g240400 Pisum sativum
PSO339G6208 Papaver somniferum
PSO384G4189 Papaver somniferum
QL01p028873 Quercus lobata
QL07p027776 Quercus lobata
QL07p027801 Quercus lobata
RcHm_v2.0_Chr3g0464321 Rosa chinensis
RcHm_v2.0_Chr5g0067231 Rosa chinensis
Rhsim01G0234000 Rhododendron simsii
Rhsim04G0163500 Rhododendron simsii
Rhsim04G0163800 Rhododendron simsii
Rhsim05G0200900 Rhododendron simsii
Sabra06G0071100 Salix brachista
Sabra06G0071300 Salix brachista
Sabra09G0028000 Salix brachista
Sabra16G0149400 Salix brachista
SalBow1G6853 Salvia bowleyana
SalBow6G0394 Salvia bowleyana
Sc01g0004970 Simmondsia chinensis
Sc12g0001110 Simmondsia chinensis
Sed0004642 Sechium edule
Sed0012741 Sechium edule
SEGI_38543 Sequoiadendron giganteum
SGA_v2.0_scaffold75G24982 Striga asiatica
SGA_v2.0_scaffold85G26806 Striga asiatica
SHI05899 Sapria himalayana
SMO112G0093 Selaginella moellendorffii
SMO364G0691 Selaginella moellendorffii
Solyc06g076590.3 Solanum lycopersicum
Solyc09g011720.3 Solanum lycopersicum
Sopen06g032980 Solanum pennellii
Sopen09g006540 Solanum pennellii
Sp4g12240 Schrenkiella parvula
Sp4g20240 Schrenkiella parvula
Sp6g20720 Schrenkiella parvula
Sp6g40440 Schrenkiella parvula
TAR369G1060 Trochodendron aralioides
TAR623G1226 Trochodendron aralioides
TAR623G1734 Trochodendron aralioides
TAR633G1918 Trochodendron aralioides
THA.LOC104799416 Tarenaya hassleriana
THA.LOC104800710 Tarenaya hassleriana
THA.LOC104806535 Tarenaya hassleriana
THA.LOC104814896 Tarenaya hassleriana
THA.LOC104816240 Tarenaya hassleriana
THA.LOC104823269 Tarenaya hassleriana
THA.LOC104824512 Tarenaya hassleriana
Thecc.05G026600 Theobroma cacao
Thecc.09G309700 Theobroma cacao
Thhalv10012705m.g Eutrema salsugineum
Thhalv10012736m.g Eutrema salsugineum
Thhalv10016221m.g Eutrema salsugineum
Thhalv10016397m.g Eutrema salsugineum
TPR.G13637 Trifolium pratense
TPR.G17888 Trifolium pratense
TPR.G31972 Trifolium pratense
TPR.G6887 Trifolium pratense
TWI31G0404 Tripterygium wilfordii
TWI74G0389 Tripterygium wilfordii
TWI79G1635 Tripterygium wilfordii
unitig_22.g6582 Utricularia gibba
unitig_22.g6583 Utricularia gibba
unitig_26.g9096 Utricularia gibba
vmacro08619 Vaccinium macrocarpon
vmacro14572 Vaccinium macrocarpon
vmacro20203 Vaccinium macrocarpon
VMungo0331G1820 Vigna mungo
VMungo1080G1899 Vigna mungo
VMungo1383G1121 Vigna mungo
Zm00001eb011960 Zea mays
Zm00001eb397920 Zea mays

User provided reference genes

Program Settings