Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p40310 Brassica napus
A09p00620 Brassica napus
Aa31LG10G10140 Aethionema arabicum
Aa31LG11G5430 Aethionema arabicum
Aa31LG4G9800 Aethionema arabicum
Aa31LG5G18490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.782 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4977 Anthoceros agrestis
Actinidia03051 Actinidia chinensis
Actinidia38268 Actinidia chinensis
Ah.05g175860 Amaranthus hybridus
Ah.11g040520 Amaranthus hybridus
AL3G19330 Arabidopsis lyrata
AL6G53250 Arabidopsis lyrata
Aqoxy2G02797 Aquilegia oxysepala
Aqoxy5G00703 Aquilegia oxysepala
Aqoxy7G02906 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1BY4XL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1JAQ89 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6B0T5V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7790ZZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BF0W30 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GFW5PY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I356LV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.INA4VP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LMZ4B6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PMPU7Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RZKK0D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U9VUHP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z6RYGL Arachis hypogaea
AT3G07950 Arabidopsis thaliana
AT4G00231 Arabidopsis thaliana
ATR0115G026 Amborella trichopoda
ATR0559G188 Amborella trichopoda
ATR0820G267 Amborella trichopoda
Atru.chr1.534 Acer truncatum
Atru.chr12.731 Acer truncatum
AUR62004280 Chenopodium quinoa
AUR62013854 Chenopodium quinoa
AUR62033377 Chenopodium quinoa
AUR62036746 Chenopodium quinoa
BcaB01g02233 Brassica carinata
BcaB04g21262 Brassica carinata
BcaC04g24187 Brassica carinata
BcaC05g29583 Brassica carinata
BcaC09g47964 Brassica carinata
BolC1t05516H Brassica oleracea
BolC5t34594H Brassica oleracea
BolC9t52959H Brassica oleracea
BraA09t35698Z Brassica rapa
C05p59390 Brassica napus
C09p00240 Brassica napus
CAN.G1014.4 Capsicum annuum
CAN.G4.5 Capsicum annuum
CANSAT56G1702 Cannabis sativa
CANSAT56G1737 Cannabis sativa
CARHR082690 Cardamine hirsuta
CARHR248310 Cardamine hirsuta
Carub.0003s0752 Capsella rubella
Carub.0005s0957 Capsella rubella
Carub.0006s2681 Capsella rubella
Ca_07850_v3 Cicer arietinum L.
Ca_07851_v3 Cicer arietinum L.
Ca_12760_v3 Cicer arietinum L.
CBR_g11243 Chara braunii
CBR_g31682 Chara braunii
CBR_g52155 Chara braunii
CBR_g52157 Chara braunii
Cc02_g37060 Coffea canephora
Cc09_g01990 Coffea canephora
CDE01G0692 Ceratophyllum demersum
CDE10G0691 Ceratophyllum demersum
Cfa001612 Carpinus fangiana
Cfa025342 Carpinus fangiana
Ciclev10004825m.g Citrus clementina
Ciclev10032201m.g Citrus clementina
CiPaw.01G274000 Carya illinoinensis
CiPaw.02G174800 Carya illinoinensis
CiPaw.02G175900 Carya illinoinensis
ClCG09G012850 Citrullus lanatus
ClCG09G020640 Citrullus lanatus
COL.COLO4_19760 Corchorus olitorius
COL.COLO4_23705 Corchorus olitorius
Cpa.g.sc53.62 Carica papaya
Cpa.g.sc753.2 Carica papaya
Cre08.g374300 Chlamydomonas reinhardtii
Cre17.g706850 Chlamydomonas reinhardtii
CsaV3_3G049900 Cucumis sativus L.
CsaV3_5G025750 Cucumis sativus L.
CSS0007104 Camellia sinensis var. sinensis
CSS0010121 Camellia sinensis var. sinensis
CSS0012304 Camellia sinensis var. sinensis
CSS0039830 Camellia sinensis var. sinensis
CSS0043642 Camellia sinensis var. sinensis
DCAR_006448 Daucus carota
DCAR_006897 Daucus carota
Dinv11786 Davidia involucrata
Dinv31333 Davidia involucrata
Dinv32411 Davidia involucrata
Duzib106G0378 Durio zibethinus
Duzib114G0604 Durio zibethinus
Duzib213G0290 Durio zibethinus
Duzib268G0813 Durio zibethinus
ECA232G3999 Erigeron canadensis
ECA233G5952 Erigeron canadensis
ECA236G1094 Erigeron canadensis
EL10Ac1g00960 Beta vulgaris
EL10Ac1g02054 Beta vulgaris
Eucgr.H05060 Eucalyptus grandis
Eucgr.I00835 Eucalyptus grandis
Eucgr.I00845 Eucalyptus grandis
Eucgr.J01098 Eucalyptus grandis
FAN01G0405 Fragaria x ananassa
FAN01G0922 Fragaria x ananassa
FAN03G1754 Fragaria x ananassa
FAN03G1970 Fragaria x ananassa
FAN03G2381 Fragaria x ananassa
FAN03G2676 Fragaria x ananassa
FAN06G0112 Fragaria x ananassa
FAN06G0845 Fragaria x ananassa
FAN06G0866 Fragaria x ananassa
FAN06G4730 Fragaria x ananassa
FAN10G0547 Fragaria x ananassa
FAN10G0713 Fragaria x ananassa
FAN10G1564 Fragaria x ananassa
FvH4_7g08540 Fragaria vesca
FvH4_7g12770 Fragaria vesca
FvH4_7g19410 Fragaria vesca
FvH4_7g19770 Fragaria vesca
Glyma.02G064500 Glycine max
Glyma.09G276502 Glycine max
Glyma.10G212100 Glycine max
Glyma.16G145700 Glycine max
Glyma.18G215400 Glycine max
Gohir.A01G099100 Gossypium hirsutum
Gohir.A01G099700 Gossypium hirsutum
Gohir.A05G412900 Gossypium hirsutum
Gohir.A10G207000 Gossypium hirsutum
Gohir.A13G024400 Gossypium hirsutum
Gohir.D01G083600 Gossypium hirsutum
Gohir.D01G084100 Gossypium hirsutum
Gohir.D04G003200 Gossypium hirsutum
Gohir.D10G215100 Gossypium hirsutum
Gohir.D13G023300 Gossypium hirsutum
Gorai.002G109400 Gossypium raimondii
Gorai.002G109800 Gossypium raimondii
Gorai.011G240600 Gossypium raimondii
Gorai.012G004300 Gossypium raimondii
Gorai.013G026100 Gossypium raimondii
GSVIVG01016297001 Vitis vinifera
GSVIVG01026499001 Vitis vinifera
HanXRQChr04g0122171 Helianthus annuus
HanXRQChr09g0246441 Helianthus annuus
Haze_00291 Corylus avellana
Haze_16907 Corylus avellana
Hma1.2p1_0063F.1_g034440 Hydrangea macrophylla
Hma1.2p1_0132F.1_g060740 Hydrangea macrophylla
HPP92_001565 Vanilla planifolia
HPP92_014675 Vanilla planifolia
Hund09554 Selenicereus undatus
Hund12040 Selenicereus undatus
Hund16968 Selenicereus undatus
Lalb_Chr01g0010101 Lupinus albus
Lalb_Chr19g0127181 Lupinus albus
Lalb_Chr19g0129631 Lupinus albus
Lj1C916T4 Lonicera japonica
Lj1g0014823 Lotus japonicus
Lj2g0017031 Lotus japonicus
Lj4g0006210 Lotus japonicus
Lj5g0018602 Lotus japonicus
Lj5g0021726 Lotus japonicus
Lj6A55T16 Lonicera japonica
Lj6A55T17 Lonicera japonica
Lsat_1_v5_gn_7_6921 Lactuca sativa
Lsat_1_v5_gn_8_19940 Lactuca sativa
Lsat_1_v5_gn_9_68641 Lactuca sativa
Manes.05G041100 Manihot esculenta
Manes.07G104300 Manihot esculenta
Mapoly0062s0112 Marchantia polymorpha
Mapoly0066s0031 Marchantia polymorpha
MBI05_g28393_MAGBIO Magnolia biondii
MBI07_g41454_MAGBIO Magnolia biondii
MBI17_g11655_MAGBIO Magnolia biondii
MBI17_g11657_MAGBIO Magnolia biondii
MBI17_g17186_MAGBIO Magnolia biondii
MBI19_g20119_MAGBIO Magnolia biondii
MCO03G295 Micromonas commoda
MCO07G038 Micromonas commoda
MCO07G121 Micromonas commoda
MD01G1110300 Malus domestica
MD02G1196600 Malus domestica
MD07G1124700 Malus domestica
MD07G1124800 Malus domestica
MD07G1176100 Malus domestica
MD15G1435200 Malus domestica
Medtr1g095490 Medicago truncatula
Medtr7g075940 Medicago truncatula
MELO3C002900.2 Cucumis melo
MELO3C003326.2 Cucumis melo
Migut.D01751 Erythranthe guttata
Migut.D01755 Erythranthe guttata
Migut.F01769 Erythranthe guttata
Migut.F02000 Erythranthe guttata
Migut.L00878 Erythranthe guttata
Migut.L00973 Erythranthe guttata
MSTRG.27460 Avicennia marina
MSTRG.8150 Avicennia marina
Nitab4.5_0000233g0070 Nicotiana tabacum
Nitab4.5_0000603g0070 Nicotiana tabacum
Nitab4.5_0001040g0030 Nicotiana tabacum
Nitab4.5_0001352g0010 Nicotiana tabacum
Nitab4.5_0003477g0020 Nicotiana tabacum
Nn1g06899 Nelumbo nucifera
Nn2g10413 Nelumbo nucifera
Nn2g10756 Nelumbo nucifera
Nn2g13073 Nelumbo nucifera
Oeu024552.2 Olea europaea
Oeu043934.2 Olea europaea
Oeu052143.1 Olea europaea
Oeu061480.1 Olea europaea
Os03g0118900 Oryza sativa ssp. japonica
Os03g0358200 Oryza sativa ssp. japonica
Os04g0103300 Oryza sativa ssp. japonica
Os04g0173300 Oryza sativa ssp. japonica
Os07g0655400 Oryza sativa ssp. japonica
Peaxi162Scf00153g01322 Petunia axillaris
Peaxi162Scf00207g01356 Petunia axillaris
Peaxi162Scf00231g00244 Petunia axillaris
Peaxi162Scf00272g00023 Petunia axillaris
PGR004G1086 Punica granatum
PGR044G1956 Punica granatum
PGSC0003DMG400016476 Solanum tuberosum
PGSC0003DMG402027917 Solanum tuberosum
Phvul.004G071600 Phaseolus vulgaris
Phvul.005G009900 Phaseolus vulgaris
Phvul.005G010100 Phaseolus vulgaris
Phvul.007G093800 Phaseolus vulgaris
Potri.008G041100 Populus trichocarpa
Potri.008G158901 Populus trichocarpa
Potri.010G220900 Populus trichocarpa
Potri.014G074900 Populus trichocarpa
Pp3c16_4780 Physcomitrium patens
Pp3c21_1420 Physcomitrium patens
Pp3c27_5280 Physcomitrium patens
PRCOL_00004972 Prasinoderma coloniale
Prupe.2G152200 Prunus persica
Prupe.8G142500 Prunus persica
Psat3g112920 Pisum sativum
Psat4g209120 Pisum sativum
Psat6g185440 Pisum sativum
PSO063G6730 Papaver somniferum
PSO326G0001 Papaver somniferum
PSO339G2303 Papaver somniferum
PSO339G4598 Papaver somniferum
PSO384G3798 Papaver somniferum
PSO478G1189 Papaver somniferum
PSO541G1892 Papaver somniferum
PSO541G2051 Papaver somniferum
PSO781G0068 Papaver somniferum
PSO781G0092 Papaver somniferum
PSO781G0254 Papaver somniferum
PSO782G1679 Papaver somniferum
PSO782G4156 Papaver somniferum
PSO782G4203 Papaver somniferum
QL08p050945 Quercus lobata
QL08p056315 Quercus lobata
RcHm_v2.0_Chr1g0313121 Rosa chinensis
RcHm_v2.0_Chr1g0351801 Rosa chinensis
RcHm_v2.0_Chr1g0363681 Rosa chinensis
Rhsim03G0124200 Rhododendron simsii
Rhsim05G0144200 Rhododendron simsii
Rhsim09G0040900 Rhododendron simsii
Sabra08G0027900 Salix brachista
Sabra10G0170600 Salix brachista
Sabra14G0053500 Salix brachista
Sabra14G0053600 Salix brachista
SalBow3G3659 Salvia bowleyana
SalBow4G0807 Salvia bowleyana
SalBow7G2566 Salvia bowleyana
Sc02g0002270 Simmondsia chinensis
Sc20g0001940 Simmondsia chinensis
Sed0000408 Sechium edule
Sed0013357 Sechium edule
SEGI_02403 Sequoiadendron giganteum
SEGI_08371 Sequoiadendron giganteum
SEGI_14537 Sequoiadendron giganteum
SEGI_36330 Sequoiadendron giganteum
SGA_v2.0_scaffold341G49359 Striga asiatica
SGA_v2.0_scaffold7G04047 Striga asiatica
SHI07338 Sapria himalayana
SMO140G0041 Selaginella moellendorffii
SMO351G0039 Selaginella moellendorffii
SMO351G0444 Selaginella moellendorffii
Solyc02g080650.3 Solanum lycopersicum
Solyc04g049180.3 Solanum lycopersicum
Sopen02g025360 Solanum pennellii
Sopen04g018690 Solanum pennellii
Sopen04g024480 Solanum pennellii
Sp3g06860 Schrenkiella parvula
Sp6g00320 Schrenkiella parvula
TAR375G0220 Trochodendron aralioides
TAR623G1191 Trochodendron aralioides
TAR624G0159 Trochodendron aralioides
TAR633G1943 Trochodendron aralioides
THA.LOC104801468 Tarenaya hassleriana
THA.LOC104809877 Tarenaya hassleriana
Thecc.07G183300 Theobroma cacao
Thecc.10G071300 Theobroma cacao
Thhalv10021192m.g Eutrema salsugineum
Thhalv10025092m.g Eutrema salsugineum
TPR.G13243 Trifolium pratense
TPR.G1807 Trifolium pratense
TPR.G18232 Trifolium pratense
TPR.G23686 Trifolium pratense
TPR.G34261 Trifolium pratense
TPR.G34267 Trifolium pratense
TPR.G36683 Trifolium pratense
TPR.G37851 Trifolium pratense
TPR.G6584 Trifolium pratense
TPR.G6606 Trifolium pratense
TWI15G0762 Tripterygium wilfordii
TWI34G0947 Tripterygium wilfordii
TWI38G1551 Tripterygium wilfordii
unitig_0.g170 Utricularia gibba
unitig_0.g2136 Utricularia gibba
unitig_736.g22520 Utricularia gibba
unitig_747.g21458 Utricularia gibba
unitig_747.g21459 Utricularia gibba
vmacro07078 Vaccinium macrocarpon
vmacro08923 Vaccinium macrocarpon
vmacro19640 Vaccinium macrocarpon
VMungo0464G0347 Vigna mungo
VMungo1383G2849 Vigna mungo
Zm00001eb001350 Zea mays
Zm00001eb017450 Zea mays
Zm00001eb089590 Zea mays
Zm00001eb110580 Zea mays
Zm00001eb394380 Zea mays
Zm00001eb418910 Zea mays

User provided reference genes

Program Settings