Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16420 Brassica napus
A01p35030 Brassica napus
A02p12260 Brassica napus
A02p42280 Brassica napus
A03p16100 Brassica napus
A09p07670 Brassica napus
A10p09510 Brassica napus
Aa31LG11G1290 Aethionema arabicum
Aa31LG11G1310 Aethionema arabicum
Aa31LG3G7980 Aethionema arabicum
Aa31LG4G16190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1183 Anthoceros agrestis
Actinidia03080 Actinidia chinensis
Actinidia31790 Actinidia chinensis
Ah.07g208130 Amaranthus hybridus
Ah.07g208160 Amaranthus hybridus
Ah.13g067340 Amaranthus hybridus
AL5G26540 Arabidopsis lyrata
AL8G39120 Arabidopsis lyrata
AL8G39130 Arabidopsis lyrata
Aqoxy5G01460 Aquilegia oxysepala
Aqoxy5G03943 Aquilegia oxysepala
Aqoxy6G01796 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.62R86U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8R40LF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9CY91L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B4R4A6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WBTC4R Arachis hypogaea
AT3G45030 Arabidopsis thaliana
AT3G47370 Arabidopsis thaliana
AT5G62300 Arabidopsis thaliana
ATR0598G109 Amborella trichopoda
Atru.chr1.659 Acer truncatum
Atru.chr5.293 Acer truncatum
AUR62016116 Chenopodium quinoa
AUR62035062 Chenopodium quinoa
BcaB01g04166 Brassica carinata
BcaB01g04167 Brassica carinata
BcaB02g09641 Brassica carinata
BcaB06g28193 Brassica carinata
BcaC01g02464 Brassica carinata
BcaC01g06129 Brassica carinata
BcaC02g10460 Brassica carinata
BcaC03g14595 Brassica carinata
BcaC03g18146 Brassica carinata
BcaC04g20660 Brassica carinata
BcaC04g23415 Brassica carinata
BcaC05g28519 Brassica carinata
BcaC07g39964 Brassica carinata
BcaC09g48929 Brassica carinata
BcaNung01398 Brassica carinata
BolC2t08171H Brassica oleracea
BolC2t12273H Brassica oleracea
BolC3t14286H Brassica oleracea
BolC3t18704H Brassica oleracea
BolC3t19797H Brassica oleracea
BolC4t22554H Brassica oleracea
BolC9t53767H Brassica oleracea
BolC9t56970H Brassica oleracea
BraA01t03584Z Brassica rapa
BraA02t06291Z Brassica rapa
BraA02t09157Z Brassica rapa
BraA03t10901Z Brassica rapa
BraA06t25858Z Brassica rapa
BraA09t36418Z Brassica rapa
BraA10t43026Z Brassica rapa
C01p44440 Brassica napus
C02p20380 Brassica napus
C02p62140 Brassica napus
C03p18950 Brassica napus
C09p08580 Brassica napus
C09p40890 Brassica napus
CAN.G134.17 Capsicum annuum
CAN.G134.26 Capsicum annuum
CANSAT56G0326 Cannabis sativa
CANSAT56G3006 Cannabis sativa
CARHR155990 Cardamine hirsuta
CARHR276080 Cardamine hirsuta
CARHR276090 Cardamine hirsuta
Carub.0005s1344 Capsella rubella
Carub.0006s2785 Capsella rubella
Carub.0008s2299 Capsella rubella
Ca_01842_v3 Cicer arietinum L.
Ca_08273_v3 Cicer arietinum L.
CBR_g20003 Chara braunii
Cc02_g04000 Coffea canephora
Cc02_g04020 Coffea canephora
CDE02G4688 Ceratophyllum demersum
CDE11G0577 Ceratophyllum demersum
CDE11G1058 Ceratophyllum demersum
Cfa001745 Carpinus fangiana
Cfa007295 Carpinus fangiana
Cfa008222 Carpinus fangiana
Cfa020907 Carpinus fangiana
Ciclev10006225m.g Citrus clementina
CiPaw.03G096100 Carya illinoinensis
CiPaw.03G096200 Carya illinoinensis
CiPaw.04G062000 Carya illinoinensis
CiPaw.09G126500 Carya illinoinensis
CiPaw.14G123600 Carya illinoinensis
ClCG01G005170 Citrullus lanatus
ClCG05G007460 Citrullus lanatus
COL.COLO4_11050 Corchorus olitorius
COL.COLO4_24768 Corchorus olitorius
Cpa.g.sc3.289 Carica papaya
Cpa.g.sc65.28 Carica papaya
Cre16.g660150 Chlamydomonas reinhardtii
CsaV3_3G016300 Cucumis sativus L.
CsaV3_5G005450 Cucumis sativus L.
CSS0025451 Camellia sinensis var. sinensis
CSS0036204 Camellia sinensis var. sinensis
CSS0041083 Camellia sinensis var. sinensis
CSS0045896 Camellia sinensis var. sinensis
DCAR_000559 Daucus carota
DCAR_009424 Daucus carota
DCAR_020202 Daucus carota
Dinv28544 Davidia involucrata
Dinv28545 Davidia involucrata
Dinv28546 Davidia involucrata
Duzib068G0885 Durio zibethinus
Duzib084G0499 Durio zibethinus
Duzib205G1844 Durio zibethinus
ECA247G3993 Erigeron canadensis
ECA248G0509 Erigeron canadensis
EL10Ac3g05806 Beta vulgaris
EL10Ac3g06560 Beta vulgaris
Eucgr.K03280 Eucalyptus grandis
Eucgr.K03281 Eucalyptus grandis
FAN01G2472 Fragaria x ananassa
FAN03G2141 Fragaria x ananassa
FAN06G1394 Fragaria x ananassa
FAN06G1519 Fragaria x ananassa
FAN07G0629 Fragaria x ananassa
FAN10G2192 Fragaria x ananassa
FAN12G4109 Fragaria x ananassa
FAN22G2102 Fragaria x ananassa
FvH4_4g30020 Fragaria vesca
FvH4_7g28020 Fragaria vesca
Glyma.01G241800 Glycine max
Glyma.03G142200 Glycine max
Glyma.03G142300 Glycine max
Glyma.11G002400 Glycine max
Glyma.12G003600 Glycine max
Glyma.14G044100 Glycine max
Glyma.19G145000 Glycine max
Glyma.19G145100 Glycine max
Gohir.A07G039000 Gossypium hirsutum
Gohir.A09G044500 Gossypium hirsutum
Gohir.A09G178200 Gossypium hirsutum
Gohir.A11G007800 Gossypium hirsutum
Gohir.A12G264850 Gossypium hirsutum
Gohir.D07G043200 Gossypium hirsutum
Gohir.D09G045800 Gossypium hirsutum
Gohir.D09G173800 Gossypium hirsutum
Gohir.D11G006900 Gossypium hirsutum
Gohir.D12G265050 Gossypium hirsutum
Gorai.001G046200 Gossypium raimondii
Gorai.006G064700 Gossypium raimondii
Gorai.006G195800 Gossypium raimondii
Gorai.007G008300 Gossypium raimondii
Gorai.008G284700 Gossypium raimondii
GSVIVG01018553001 Vitis vinifera
HanXRQChr01g0008641 Helianthus annuus
HanXRQChr05g0132111 Helianthus annuus
HanXRQChr06g0172351 Helianthus annuus
HanXRQChr10g0300171 Helianthus annuus
HanXRQChr13g0390711 Helianthus annuus
Haze_13836 Corylus avellana
Haze_14801 Corylus avellana
Haze_19338 Corylus avellana
Haze_27718 Corylus avellana
Hma1.2p1_0301F.1_g118630 Hydrangea macrophylla
Hma1.2p1_0654F.1_g196470 Hydrangea macrophylla
HPP92_005610 Vanilla planifolia
HPP92_020437 Vanilla planifolia
Hund04624 Selenicereus undatus
Hund11800 Selenicereus undatus
Lalb_Chr15g0084051 Lupinus albus
Lalb_Chr18g0052471 Lupinus albus
Lalb_Chr19g0140391 Lupinus albus
Lalb_Chr20g0116321 Lupinus albus
Lj1g0016377 Lotus japonicus
Lj6g0019454 Lotus japonicus
Lsat_1_v5_gn_5_162421 Lactuca sativa
Lsat_1_v5_gn_5_163780 Lactuca sativa
Lsat_1_v5_gn_8_80580 Lactuca sativa
Manes.06G136900 Manihot esculenta
Manes.14G033700 Manihot esculenta
Mapoly0006s0253 Marchantia polymorpha
Mapoly0055s0088 Marchantia polymorpha
Mapoly0158s0015 Marchantia polymorpha
Mapoly0158s0031 Marchantia polymorpha
MBI04_g30225_MAGBIO Magnolia biondii
MBI12_g31642_MAGBIO Magnolia biondii
MBI14_g41837_MAGBIO Magnolia biondii
MCO07G048 Micromonas commoda
MD01G1184700 Malus domestica
MD07G1256900 Malus domestica
Medtr0157s0070 Medicago truncatula
Medtr1g091057 Medicago truncatula
Medtr2g085090 Medicago truncatula
Medtr4g034030 Medicago truncatula
Medtr7g092720 Medicago truncatula
MELO3C005411.2 Cucumis melo
MELO3C006829.2 Cucumis melo
MELO3C029683.2 Cucumis melo
MELO3C029730.2 Cucumis melo
MELO3C035382.2 Cucumis melo
Migut.F00443 Erythranthe guttata
Migut.O00302 Erythranthe guttata
MSTRG.123 Avicennia marina
MSTRG.17769 Avicennia marina
MSTRG.8810 Avicennia marina
Nitab4.5_0001937g0060 Nicotiana tabacum
Nitab4.5_0002838g0070 Nicotiana tabacum
Nitab4.5_0003053g0030 Nicotiana tabacum
Nitab4.5_0003445g0010 Nicotiana tabacum
Nitab4.5_0004168g0050 Nicotiana tabacum
Nn1g01142 Nelumbo nucifera
Nn4g26367 Nelumbo nucifera
Nn6g32296 Nelumbo nucifera
Oeu021718.1 Olea europaea
Oeu023227.1 Olea europaea
Oeu028178.2 Olea europaea
Oeu039208.2 Olea europaea
Oeu045826.1 Olea europaea
Os03g0249400 Oryza sativa ssp. japonica
Os06g0134000 Oryza sativa ssp. japonica
Os10g0170200 Oryza sativa ssp. japonica
Peaxi162Scf00071g00829 Petunia axillaris
Peaxi162Scf00220g00042 Petunia axillaris
PGR142G2096 Punica granatum
PGR142G2751 Punica granatum
PGR142G3371 Punica granatum
PGSC0003DMG400000965 Solanum tuberosum
PGSC0003DMG400003291 Solanum tuberosum
PGSC0003DMG400017711 Solanum tuberosum
Phvul.001G139900 Phaseolus vulgaris
Phvul.002G051100 Phaseolus vulgaris
Phvul.008G141800 Phaseolus vulgaris
Potri.002G116900 Populus trichocarpa
Potri.002G146600 Populus trichocarpa
Potri.012G128300 Populus trichocarpa
Potri.015G129800 Populus trichocarpa
Pp3c14_7180 Physcomitrium patens
Pp3c15_21510 Physcomitrium patens
Pp3c1_21860 Physcomitrium patens
Pp3c23_11780 Physcomitrium patens
PRCOL_00002469 Prasinoderma coloniale
Prupe.1G120500 Prunus persica
Prupe.1G287000 Prunus persica
Prupe.1G523300 Prunus persica
Prupe.2G281000 Prunus persica
Prupe.2G281100 Prunus persica
Prupe.4G264500 Prunus persica
Prupe.5G012000 Prunus persica
Prupe.5G059500 Prunus persica
Psat0s195g0040 Pisum sativum
Psat5g244320 Pisum sativum
Psat7g151880 Pisum sativum
PSO170G5230 Papaver somniferum
PSO210G0340 Papaver somniferum
PSO541G0149 Papaver somniferum
PSO675G7212 Papaver somniferum
QL09p018999 Quercus lobata
QL09p019003 Quercus lobata
QL09p019008 Quercus lobata
RcHm_v2.0_Chr1g0318011 Rosa chinensis
RcHm_v2.0_Chr1g0324851 Rosa chinensis
RcHm_v2.0_Chr1g0374951 Rosa chinensis
RcHm_v2.0_Chr4g0396241 Rosa chinensis
RcHm_v2.0_Chr4g0438311 Rosa chinensis
Rhsim03G0169900 Rhododendron simsii
Rhsim03G0170100 Rhododendron simsii
Rhsim09G0192900 Rhododendron simsii
Sabra02G0114200 Salix brachista
Sabra12G0096400 Salix brachista
Sabra14G0048100 Salix brachista
Sabra15G0143300 Salix brachista
SalBow2G3619 Salvia bowleyana
SalBow4G2922 Salvia bowleyana
SalBow5G5143 Salvia bowleyana
Sc06g0000820 Simmondsia chinensis
Sc13g0007820 Simmondsia chinensis
Sc19g0001890 Simmondsia chinensis
Sed0002655 Sechium edule
Sed0011452 Sechium edule
Sed0017760 Sechium edule
Sed0022101 Sechium edule
SEGI_05449 Sequoiadendron giganteum
SEGI_35601 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05480 Striga asiatica
SGA_v2.0_scaffold2G01166 Striga asiatica
SGA_v2.0_scaffold486G52390 Striga asiatica
SGA_v2.0_scaffold99G29449 Striga asiatica
SMO239G0141 Selaginella moellendorffii
Solyc01g096580.3 Solanum lycopersicum
Solyc01g096590.3 Solanum lycopersicum
Sopen00g005650 Solanum pennellii
Sopen00g005660 Solanum pennellii
Sopen01g040310 Solanum pennellii
Sopen01g040320 Solanum pennellii
Sopen08g012720 Solanum pennellii
Sp2g25580 Schrenkiella parvula
Sp5g14530 Schrenkiella parvula
Sp6g13770 Schrenkiella parvula
TAR381G0911 Trochodendron aralioides
TAR628G0060 Trochodendron aralioides
TAR629G2003 Trochodendron aralioides
TAR636G1553 Trochodendron aralioides
TAR636G1944 Trochodendron aralioides
THA.LOC104798600 Tarenaya hassleriana
THA.LOC104813864 Tarenaya hassleriana
THA.LOC104818264 Tarenaya hassleriana
THA.LOC104821402 Tarenaya hassleriana
Thecc.03G159400 Theobroma cacao
Thhalv10005136m.g Eutrema salsugineum
Thhalv10010823m.g Eutrema salsugineum
Thhalv10015032m.g Eutrema salsugineum
TPR.G2610 Trifolium pratense
TPR.G38948 Trifolium pratense
TPR.G4725 Trifolium pratense
TWI14G1156 Tripterygium wilfordii
TWI23G0342 Tripterygium wilfordii
TWI39G0549 Tripterygium wilfordii
TWI63G1249 Tripterygium wilfordii
unitig_0.g2502 Utricularia gibba
unitig_37.g12503 Utricularia gibba
unitig_52.g17759 Utricularia gibba
vmacro06775 Vaccinium macrocarpon
vmacro06776 Vaccinium macrocarpon
vmacro09891 Vaccinium macrocarpon
VMungo0720G0210 Vigna mungo
VMungo1215G2526 Vigna mungo
VMungo1383G1358 Vigna mungo
VMungo1383G3430 Vigna mungo
Zm00001eb010700 Zea mays
Zm00001eb378000 Zea mays
Zm00001eb398590 Zea mays

User provided reference genes

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