Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06500 Brassica napus
A02p06240 Brassica napus
A03p60980 Brassica napus
A09p10290 Brassica napus
Aa31LG1G14220 Aethionema arabicum
Aa31LG2G18550 Aethionema arabicum
Aa31LG7G11550 Aethionema arabicum
Aa31sc74G90 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2672 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2673 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5020 Anthoceros agrestis
Actinidia07337 Actinidia chinensis
Actinidia10533 Actinidia chinensis
Actinidia14004 Actinidia chinensis
Actinidia14005 Actinidia chinensis
Actinidia14177 Actinidia chinensis
Actinidia21933 Actinidia chinensis
Actinidia22281 Actinidia chinensis
Ah.09g224500 Amaranthus hybridus
Ah.12g060600 Amaranthus hybridus
AL3G44840 Arabidopsis lyrata
AL6G31970 Arabidopsis lyrata
AL7G20230 Arabidopsis lyrata
Aqoxy7G02427 Aquilegia oxysepala
Aqoxy7G03303 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.67NNK3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HAI9AH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MIA46J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PKW5X9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YJEW4K Arachis hypogaea
AT2G11810 Arabidopsis thaliana
AT4G31780 Arabidopsis thaliana
AT5G20410 Arabidopsis thaliana
ATR0580G206 Amborella trichopoda
ATR0724G058 Amborella trichopoda
ATR0767G142 Amborella trichopoda
Atru.chr7.1981 Acer truncatum
Atru.chr7.2581 Acer truncatum
Atru.chr7.2582 Acer truncatum
AUR62011205 Chenopodium quinoa
AUR62013282 Chenopodium quinoa
AUR62024785 Chenopodium quinoa
AUR62032434 Chenopodium quinoa
BcaB01g04788 Brassica carinata
BcaB02g11503 Brassica carinata
BcaB05g22848 Brassica carinata
BcaC03g13762 Brassica carinata
BcaC03g13763 Brassica carinata
BcaC04g23091 Brassica carinata
BcaC09g51969 Brassica carinata
BcaNung01499 Brassica carinata
BcaNung01501 Brassica carinata
BcaNung04119 Brassica carinata
BcaNung05184 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01600 Brassica napus
BolC1t00709H Brassica oleracea
BolC2t07040H Brassica oleracea
BolC7t46335H Brassica oleracea
BolC9t54117H Brassica oleracea
BraA01t00611Z Brassica rapa
BraA02t05572Z Brassica rapa
BraA03t15139Z Brassica rapa
BraA09t36674Z Brassica rapa
C01p07170 Brassica napus
C07p58880 Brassica napus
C09p12230 Brassica napus
CAN.G285.19 Capsicum annuum
CAN.G467.22 Capsicum annuum
CAN.G551.72 Capsicum annuum
CANSAT11G1874 Cannabis sativa
CANSAT25G2482 Cannabis sativa
CARHR104980 Cardamine hirsuta
CARHR192390 Cardamine hirsuta
CARHR239680 Cardamine hirsuta
Carub.0003s2771 Capsella rubella
Carub.0006s1879 Capsella rubella
Carub.0007s0878 Capsella rubella
Ca_13076_v3 Cicer arietinum L.
Ca_21647_v3 Cicer arietinum L.
CBR_g29284 Chara braunii
Cc06_g07790 Coffea canephora
Cc08_g07640 Coffea canephora
CDE02G0424 Ceratophyllum demersum
CDE02G1465 Ceratophyllum demersum
CDE05G2890 Ceratophyllum demersum
Cfa002281 Carpinus fangiana
Ciclev10007936m.g Citrus clementina
Ciclev10008213m.g Citrus clementina
Ciclev10010220m.g Citrus clementina
CiPaw.03G250700 Carya illinoinensis
CiPaw.04G176800 Carya illinoinensis
CiPaw.07G232100 Carya illinoinensis
CiPaw.08G004700 Carya illinoinensis
ClCG08G013790 Citrullus lanatus
ClCG11G003420 Citrullus lanatus
COL.COLO4_15550 Corchorus olitorius
COL.COLO4_18978 Corchorus olitorius
Cpa.g.sc148.42 Carica papaya
Cpa.g.sc277.14 Carica papaya
Cre13.g585301 Chlamydomonas reinhardtii
CsaV3_2G003280 Cucumis sativus L.
CsaV3_2G032580 Cucumis sativus L.
CSS0007146 Camellia sinensis var. sinensis
CSS0009281 Camellia sinensis var. sinensis
CSS0017305 Camellia sinensis var. sinensis
DCAR_000732 Daucus carota
DCAR_004513 Daucus carota
DCAR_009334 Daucus carota
DCAR_014906 Daucus carota
Dinv03406 Davidia involucrata
Dinv36459 Davidia involucrata
Dinv41455 Davidia involucrata
Duzib150G0114 Durio zibethinus
Duzib150G0679 Durio zibethinus
Duzib168G1524 Durio zibethinus
Duzib168G1579 Durio zibethinus
Duzib187G1328 Durio zibethinus
ECA240G1715 Erigeron canadensis
ECA240G3067 Erigeron canadensis
EL10Ac2g02466 Beta vulgaris
EL10Ac8g18777 Beta vulgaris
Eucgr.C00320 Eucalyptus grandis
Eucgr.C00495 Eucalyptus grandis
Eucgr.C04035 Eucalyptus grandis
Eucgr.C04379 Eucalyptus grandis
FAN15G0548 Fragaria x ananassa
FAN19G0910 Fragaria x ananassa
FAN19G1472 Fragaria x ananassa
FAN23G2900 Fragaria x ananassa
FAN26G1781 Fragaria x ananassa
FAN26G2224 Fragaria x ananassa
FAN26G2542 Fragaria x ananassa
FAN27G1982 Fragaria x ananassa
FAN28G0342 Fragaria x ananassa
FAN28G2980 Fragaria x ananassa
FvH4_1g02220 Fragaria vesca
FvH4_1g21680 Fragaria vesca
FvH4_2g41310 Fragaria vesca
Glyma.13G162600 Glycine max
Glyma.14G104100 Glycine max
Glyma.17G108700 Glycine max
Glyma.17G221900 Glycine max
Gohir.A05G013600 Gossypium hirsutum
Gohir.A06G103900 Gossypium hirsutum
Gohir.A07G033900 Gossypium hirsutum
Gohir.A13G201500 Gossypium hirsutum
Gohir.D05G014700 Gossypium hirsutum
Gohir.D06G104500 Gossypium hirsutum
Gohir.D07G037400 Gossypium hirsutum
Gohir.D13G207200 Gossypium hirsutum
Gorai.001G039100 Gossypium raimondii
Gorai.009G014700 Gossypium raimondii
Gorai.010G119700 Gossypium raimondii
Gorai.013G236200 Gossypium raimondii
GSVIVG01012838001 Vitis vinifera
GSVIVG01035995001 Vitis vinifera
HanXRQChr01g0012511 Helianthus annuus
HanXRQChr03g0063141 Helianthus annuus
HanXRQChr03g0084821 Helianthus annuus
HanXRQChr07g0191531 Helianthus annuus
HanXRQChr07g0196721 Helianthus annuus
HanXRQChr07g0198771 Helianthus annuus
HanXRQChr09g0242401 Helianthus annuus
HanXRQChr10g0277861 Helianthus annuus
HanXRQChr10g0283951 Helianthus annuus
HanXRQChr13g0413291 Helianthus annuus
Haze_21382 Corylus avellana
Haze_25465 Corylus avellana
Haze_25469 Corylus avellana
Hma1.2p1_0182F.1_g080130 Hydrangea macrophylla
Hma1.2p1_0737F.1_g210780 Hydrangea macrophylla
HPP92_003854 Vanilla planifolia
HPP92_003855 Vanilla planifolia
HPP92_003862 Vanilla planifolia
HPP92_016986 Vanilla planifolia
HPP92_016999 Vanilla planifolia
HPP92_017438 Vanilla planifolia
HPP92_017439 Vanilla planifolia
HPP92_017462 Vanilla planifolia
Hund09301 Selenicereus undatus
Hund21575 Selenicereus undatus
Hund25609 Selenicereus undatus
Lalb_Chr08g0244471 Lupinus albus
Lalb_Chr11g0072271 Lupinus albus
Lalb_Chr12g0198321 Lupinus albus
Lalb_Chr13g0301381 Lupinus albus
Lalb_Chr23g0268161 Lupinus albus
Lj4g0014664 Lotus japonicus
Lj5g0004848 Lotus japonicus
Lj7A437T45 Lonicera japonica
Lj7A737T47 Lonicera japonica
Lj9A702T52 Lonicera japonica
Lsat_1_v5_gn_4_131881 Lactuca sativa
Lsat_1_v5_gn_6_77840 Lactuca sativa
Lsat_1_v5_gn_6_96561 Lactuca sativa
Lsat_1_v5_gn_7_44320 Lactuca sativa
Lsat_1_v5_gn_8_1201 Lactuca sativa
Manes.03G007100 Manihot esculenta
Manes.14G118100 Manihot esculenta
Manes.16G131900 Manihot esculenta
Mapoly0023s0061 Marchantia polymorpha
MBI14_g31657_MAGBIO Magnolia biondii
MBI15_g26066_MAGBIO Magnolia biondii
MBI15_g35738_MAGBIO Magnolia biondii
MBI15_g38939_MAGBIO Magnolia biondii
MCO01G742 Micromonas commoda
MD02G1020400 Malus domestica
MD08G1052400 Malus domestica
MD15G1043100 Malus domestica
MD15G1163200 Malus domestica
Medtr1g013650 Medicago truncatula
Medtr4g115920 Medicago truncatula
Medtr8g027715 Medicago truncatula
Medtr8g027905 Medicago truncatula
MELO3C004474.2 Cucumis melo
MELO3C011311.2 Cucumis melo
Migut.A00385 Erythranthe guttata
Migut.K00409 Erythranthe guttata
MSTRG.25823 Avicennia marina
MSTRG.26337 Avicennia marina
Nitab4.5_0000264g0080 Nicotiana tabacum
Nitab4.5_0000704g0060 Nicotiana tabacum
Nitab4.5_0001362g0020 Nicotiana tabacum
Nitab4.5_0001362g0030 Nicotiana tabacum
Nitab4.5_0002329g0110 Nicotiana tabacum
Nitab4.5_0002659g0030 Nicotiana tabacum
Nitab4.5_0005949g0010 Nicotiana tabacum
Nn2g12159 Nelumbo nucifera
Nn2g12464 Nelumbo nucifera
Nn8g39593 Nelumbo nucifera
Nn8g40100 Nelumbo nucifera
Oeu006858.1 Olea europaea
Oeu048542.1 Olea europaea
Oeu048649.1 Olea europaea
Oeu052742.1 Olea europaea
Oeu056967.1 Olea europaea
Os02g0802700 Oryza sativa ssp. japonica
Os08g0299400 Oryza sativa ssp. japonica
Os09g0423600 Oryza sativa ssp. japonica
Peaxi162Scf00045g01930 Petunia axillaris
Peaxi162Scf00088g00096 Petunia axillaris
Peaxi162Scf02135g00021 Petunia axillaris
PGR044G2001 Punica granatum
PGR102G0415 Punica granatum
PGSC0003DMG400024189 Solanum tuberosum
PGSC0003DMG400030713 Solanum tuberosum
PGSC0003DMG401007838 Solanum tuberosum
Phvul.001G042600 Phaseolus vulgaris
Phvul.003G171300 Phaseolus vulgaris
Potri.006G063300 Populus trichocarpa
Potri.006G266500 Populus trichocarpa
Potri.018G016600 Populus trichocarpa
Potri.018G123000 Populus trichocarpa
Pp3c18_19440 Physcomitrium patens
Pp3c19_16330 Physcomitrium patens
PRCOL_00004039 Prasinoderma coloniale
Prupe.1G396500 Prunus persica
Prupe.7G251400 Prunus persica
Psat4g035200 Pisum sativum
Psat6g025040 Pisum sativum
PSO017G4644 Papaver somniferum
PSO170G3114 Papaver somniferum
PSO210G2330 Papaver somniferum
PSO724G1246 Papaver somniferum
PSO782G2067 Papaver somniferum
PSO782G3063 Papaver somniferum
QL02p018443 Quercus lobata
QL02p090333 Quercus lobata
RcHm_v2.0_Chr2g0087331 Rosa chinensis
RcHm_v2.0_Chr3g0481741 Rosa chinensis
RcHm_v2.0_Chr4g0421821 Rosa chinensis
RcHm_v2.0_Chr6g0246901 Rosa chinensis
RcHm_v2.0_Chr6g0299211 Rosa chinensis
Rhsim01G0057900 Rhododendron simsii
Rhsim01G0059400 Rhododendron simsii
Rhsim02G0217400 Rhododendron simsii
Rhsim03G0252200 Rhododendron simsii
Rhsim12G0051700 Rhododendron simsii
Sabra06G0046000 Salix brachista
Sabra06G0209100 Salix brachista
Sabra18G0020000 Salix brachista
Sabra18G0104700 Salix brachista
SalBow1G7615 Salvia bowleyana
SalBow4G1815 Salvia bowleyana
SalBow6G0536 Salvia bowleyana
Sc09g0010750 Simmondsia chinensis
Sc18g0000210 Simmondsia chinensis
Sed0011441 Sechium edule
Sed0014091 Sechium edule
SEGI_08859 Sequoiadendron giganteum
SEGI_14320 Sequoiadendron giganteum
SEGI_27834 Sequoiadendron giganteum
SGA_v2.0_scaffold183G39896 Striga asiatica
SGA_v2.0_scaffold27G11626 Striga asiatica
SMO146G0050 Selaginella moellendorffii
Solyc07g007620.3 Solanum lycopersicum
Solyc08g006640.3 Solanum lycopersicum
Solyc12g009820.2 Solanum lycopersicum
Sopen06g025290 Solanum pennellii
Sopen07g003610 Solanum pennellii
Sopen08g002590 Solanum pennellii
Sopen12g004710 Solanum pennellii
Sp3g26310 Schrenkiella parvula
Sp4g03920 Schrenkiella parvula
Sp6g24010 Schrenkiella parvula
Sp7g29570 Schrenkiella parvula
TAR383G0026 Trochodendron aralioides
TAR383G1003 Trochodendron aralioides
TAR626G0288 Trochodendron aralioides
TAR626G1225 Trochodendron aralioides
THA.LOC104803611 Tarenaya hassleriana
THA.LOC104808956 Tarenaya hassleriana
THA.LOC104811011 Tarenaya hassleriana
THA.LOC104819949 Tarenaya hassleriana
Thecc.09G013000 Theobroma cacao
Thecc.09G135500 Theobroma cacao
Thhalv10013431m.g Eutrema salsugineum
Thhalv10022676m.g Eutrema salsugineum
Thhalv10024883m.g Eutrema salsugineum
TPR.G18499 Trifolium pratense
TPR.G27634 Trifolium pratense
TPR.G38937 Trifolium pratense
TPR.G7991 Trifolium pratense
TWI32G0201 Tripterygium wilfordii
TWI34G0452 Tripterygium wilfordii
unitig_744.g24376 Utricularia gibba
unitig_747.g21893 Utricularia gibba
unitig_899.g15095 Utricularia gibba
unitig_899.g15096 Utricularia gibba
vmacro06161 Vaccinium macrocarpon
vmacro06173 Vaccinium macrocarpon
vmacro06175 Vaccinium macrocarpon
vmacro07740 Vaccinium macrocarpon
vmacro11271 Vaccinium macrocarpon
VMungo0251G3270 Vigna mungo
VMungo0647G0402 Vigna mungo
VMungo1215G1689 Vigna mungo
Zm00001eb034810 Zea mays
Zm00001eb258130 Zea mays
Zm00001eb313310 Zea mays

User provided reference genes

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