Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17060 Brassica napus
A03p17070 Brassica napus
A04p23210 Brassica napus
A04p23220 Brassica napus
A05p14980 Brassica napus
Aa31LG5G6280 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5028 Anthoceros agrestis
Ah.08g215520 Amaranthus hybridus
Ah.08g215530 Amaranthus hybridus
Ah.11g043650 Amaranthus hybridus
Ah.11g043660 Amaranthus hybridus
Ah.15g095930 Amaranthus hybridus
AL4G25360 Arabidopsis lyrata
AL4G25370 Arabidopsis lyrata
Aqoxy1G01256 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AYA1A5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K1LFJJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K9QGVV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SGZ2CH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W3WWNZ Arachis hypogaea
AT2G30480 Arabidopsis thaliana
AT2G30490 Arabidopsis thaliana
ATR0626G333 Amborella trichopoda
ATR1127G228 Amborella trichopoda
Atru.chr10.2292 Acer truncatum
Atru.chr7.962 Acer truncatum
AUR62009735 Chenopodium quinoa
AUR62020713 Chenopodium quinoa
AUR62028011 Chenopodium quinoa
AUR62036209 Chenopodium quinoa
BcaB01g04100 Brassica carinata
BcaB01g04101 Brassica carinata
BcaB02g10326 Brassica carinata
BcaB06g28368 Brassica carinata
BcaB06g28369 Brassica carinata
BcaB06g28370 Brassica carinata
BcaC01g06001 Brassica carinata
BcaC01g06003 Brassica carinata
BcaC02g08018 Brassica carinata
BcaC02g11137 Brassica carinata
BolC3t14389H Brassica oleracea
BolC3t14391H Brassica oleracea
BolC4t23544H Brassica oleracea
BolC4t23545H Brassica oleracea
BolC4t23546H Brassica oleracea
BolC4t27444H Brassica oleracea
BolC4t27445H Brassica oleracea
BraA03t10982Z Brassica rapa
BraA03t10983Z Brassica rapa
BraA04t17848Z Brassica rapa
BraA04t17849Z Brassica rapa
BraA05t20423Z Brassica rapa
BraA05t20424Z Brassica rapa
BraA05t20425Z Brassica rapa
C03p20130 Brassica napus
C03p20160 Brassica napus
C04p20060 Brassica napus
C04p20070 Brassica napus
C04p59360 Brassica napus
C04p59370 Brassica napus
CAN.G106.7 Capsicum annuum
CAN.G37663.1 Capsicum annuum
CAN.G874.74 Capsicum annuum
CAN.G874.75 Capsicum annuum
CANSAT54G1597 Cannabis sativa
CANSAT80G0968 Cannabis sativa
CARHR123920 Cardamine hirsuta
CARHR123930 Cardamine hirsuta
CARHR123940 Cardamine hirsuta
Carub.0004s1164 Capsella rubella
Carub.0004s1165 Capsella rubella
Ca_05710_v3 Cicer arietinum L.
Ca_15064_v3 Cicer arietinum L.
Cc00_g00170 Coffea canephora
Cc00_g05190 Coffea canephora
Cc00_g10050 Coffea canephora
Cc01_g15360 Coffea canephora
CDE02G0870 Ceratophyllum demersum
CDE04G0262 Ceratophyllum demersum
CDE04G1565 Ceratophyllum demersum
CDE04G1674 Ceratophyllum demersum
CDE06G2791 Ceratophyllum demersum
CDE12G0632 Ceratophyllum demersum
Cfa011838 Carpinus fangiana
Cfa020742 Carpinus fangiana
Ciclev10000921m.g Citrus clementina
Ciclev10008125m.g Citrus clementina
CiPaw.13G063100 Carya illinoinensis
CiPaw.13G063200 Carya illinoinensis
CiPaw.14G050000 Carya illinoinensis
CiPaw.15G156300 Carya illinoinensis
CiPaw.16G103400 Carya illinoinensis
ClCG02G019010 Citrullus lanatus
ClCG03G000060 Citrullus lanatus
ClCG11G011420 Citrullus lanatus
ClCG11G011430 Citrullus lanatus
ClCG11G011440 Citrullus lanatus
COL.COLO4_11218 Corchorus olitorius
Cpa.g.sc115.28 Carica papaya
Cpa.g.sc2.290 Carica papaya
CsaV3_1G026620 Cucumis sativus L.
CsaV3_2G009060 Cucumis sativus L.
CsaV3_2G009070 Cucumis sativus L.
CsaV3_6G013150 Cucumis sativus L.
CsaV3_7G029530 Cucumis sativus L.
CSS0002506 Camellia sinensis var. sinensis
CSS0002737 Camellia sinensis var. sinensis
CSS0005999 Camellia sinensis var. sinensis
CSS0011139 Camellia sinensis var. sinensis
DCAR_018641 Daucus carota
DCAR_027611 Daucus carota
Dinv12283 Davidia involucrata
Dinv12608 Davidia involucrata
Dinv28734 Davidia involucrata
Duzib114G0917 Durio zibethinus
Duzib168G0169 Durio zibethinus
Duzib168G0853 Durio zibethinus
Duzib170G1074 Durio zibethinus
ECA236G0383 Erigeron canadensis
ECA247G1884 Erigeron canadensis
EL10Ac2g03638 Beta vulgaris
EL10Ac7g15849 Beta vulgaris
Eucgr.C00065 Eucalyptus grandis
Eucgr.J01844 Eucalyptus grandis
FAN07G1102 Fragaria x ananassa
FAN11G1645 Fragaria x ananassa
FAN16G1519 Fragaria x ananassa
FAN17G0458 Fragaria x ananassa
FAN21G2143 Fragaria x ananassa
FAN22G1546 Fragaria x ananassa
FAN25G3748 Fragaria x ananassa
FvH4_3g40570 Fragaria vesca
FvH4_4g06180 Fragaria vesca
Glyma.02G236500 Glycine max
Glyma.10G275550 Glycine max
Glyma.14G205200 Glycine max
Glyma.20G114200 Glycine max
Gohir.A10G178100 Gossypium hirsutum
Gohir.A11G230306 Gossypium hirsutum
Gohir.A13G235200 Gossypium hirsutum
Gohir.D10G184600 Gossypium hirsutum
Gohir.D11G232840 Gossypium hirsutum
Gohir.D13G240900 Gossypium hirsutum
Gorai.011G207000 Gossypium raimondii
Gorai.013G271700 Gossypium raimondii
GSVIVG01024554001 Vitis vinifera
GSVIVG01032256001 Vitis vinifera
GSVIVG01035166001 Vitis vinifera
HanXRQChr06g0182671 Helianthus annuus
HanXRQChr07g0187801 Helianthus annuus
HanXRQChr08g0230321 Helianthus annuus
Haze_19058 Corylus avellana
Haze_24475 Corylus avellana
Hma1.2p1_0161F.1_g072150 Hydrangea macrophylla
Hma1.2p1_0170F.1_g075230 Hydrangea macrophylla
Hma1.2p1_2463F.1_g322570 Hydrangea macrophylla
HPP92_006690 Vanilla planifolia
HPP92_012545 Vanilla planifolia
Hund03235 Selenicereus undatus
Hund29343 Selenicereus undatus
Hund29344 Selenicereus undatus
Lalb_Chr04g0251741 Lupinus albus
Lalb_Chr10g0103801 Lupinus albus
Lalb_Chr18g0054161 Lupinus albus
Lalb_Chr21g0309031 Lupinus albus
Lj1A114T68 Lonicera japonica
Lj1C114T2 Lonicera japonica
Lj5C749T3 Lonicera japonica
Lj5C749T4 Lonicera japonica
Lj5C749T5 Lonicera japonica
Lj5C765G5 Lonicera japonica
Lj5C765T3 Lonicera japonica
Lj5C765T5 Lonicera japonica
Lj5g0001536 Lotus japonicus
Lj5g0003048 Lotus japonicus
Lj6g0010605 Lotus japonicus
LjContig00141g0024570 Lotus japonicus
Lsat_1_v5_gn_8_99521 Lactuca sativa
Lsat_1_v5_gn_9_13740 Lactuca sativa
Manes.02G227200 Manihot esculenta
Manes.18G126900 Manihot esculenta
Mapoly0081s0008 Marchantia polymorpha
Mapoly0081s0009 Marchantia polymorpha
Mapoly0163s0018 Marchantia polymorpha
MBI03_g09119_MAGBIO Magnolia biondii
MBI15_g39389_MAGBIO Magnolia biondii
MBI15_g39390_MAGBIO Magnolia biondii
MD00G1221400 Malus domestica
MD03G1050900 Malus domestica
MD03G1051000 Malus domestica
MD03G1051100 Malus domestica
MD03G1051300 Malus domestica
MD03G1051400 Malus domestica
MD11G1052900 Malus domestica
Medtr1g111240 Medicago truncatula
Medtr2g037130 Medicago truncatula
Medtr5g075450 Medicago truncatula
MELO3C003932.2 Cucumis melo
MELO3C003933.2 Cucumis melo
MELO3C003934.2 Cucumis melo
MELO3C019585.2 Cucumis melo
MELO3C020483.2 Cucumis melo
MELO3C031255.2 Cucumis melo
Migut.D00816 Erythranthe guttata
Migut.N00724 Erythranthe guttata
Migut.N00725 Erythranthe guttata
Migut.N00728 Erythranthe guttata
Migut.N00729 Erythranthe guttata
MSTRG.10468 Avicennia marina
MSTRG.12712 Avicennia marina
MSTRG.17919 Avicennia marina
MSTRG.21256 Avicennia marina
Nitab4.5_0000105g0250 Nicotiana tabacum
Nitab4.5_0000404g0200 Nicotiana tabacum
Nitab4.5_0002902g0020 Nicotiana tabacum
Nitab4.5_0005105g0020 Nicotiana tabacum
Nitab4.5_0005901g0010 Nicotiana tabacum
Nn1g04632 Nelumbo nucifera
Nn2g10282 Nelumbo nucifera
Nn5g26835 Nelumbo nucifera
Nn8g41116 Nelumbo nucifera
Oeu000965.1 Olea europaea
Oeu011383.2 Olea europaea
Oeu015574.1 Olea europaea
Os01g0820000 Oryza sativa ssp. japonica
Os02g0467000 Oryza sativa ssp. japonica
Os02g0467600 Oryza sativa ssp. japonica
Os05g0320700 Oryza sativa ssp. japonica
Peaxi162Scf00390g00225 Petunia axillaris
Peaxi162Scf00556g00035 Petunia axillaris
Peaxi162Scf00954g00024 Petunia axillaris
PGR102G0809 Punica granatum
PGR142G0813 Punica granatum
PGSC0003DMG400013684 Solanum tuberosum
PGSC0003DMG401030469 Solanum tuberosum
PGSC0003DMG402030469 Solanum tuberosum
Phvul.006G079700 Phaseolus vulgaris
Phvul.007G026000 Phaseolus vulgaris
Phvul.008G247400 Phaseolus vulgaris
Potri.006G078101 Populus trichocarpa
Potri.013G157900 Populus trichocarpa
Potri.018G146100 Populus trichocarpa
Potri.019G130700 Populus trichocarpa
Pp3c12_6560 Physcomitrium patens
Pp3c13_14870 Physcomitrium patens
Pp3c16_23740 Physcomitrium patens
Pp3c25_10190 Physcomitrium patens
Pp3c3_17840 Physcomitrium patens
Pp3c4_21680 Physcomitrium patens
Prupe.1G064900 Prunus persica
Prupe.6G040400 Prunus persica
Psat2g050720 Pisum sativum
Psat6g229280 Pisum sativum
PSO339G3066 Papaver somniferum
PSO384G1193 Papaver somniferum
QL01p024463 Quercus lobata
QL08p064922 Quercus lobata
QL08p064925 Quercus lobata
QL08p064950 Quercus lobata
QL08p064976 Quercus lobata
QL08p064982 Quercus lobata
QL11p008815 Quercus lobata
RcHm_v2.0_Chr4g0397741 Rosa chinensis
RcHm_v2.0_Chr5g0073351 Rosa chinensis
Rhsim01G0166100 Rhododendron simsii
Rhsim01G0243600 Rhododendron simsii
Rhsim13G0058900 Rhododendron simsii
Sabra06G0059000 Salix brachista
Sabra18G0120500 Salix brachista
Sabra18G0128000 Salix brachista
Sabra19G0127500 Salix brachista
SalBow2G1163 Salvia bowleyana
SalBow2G1169 Salvia bowleyana
Sc06g0008060 Simmondsia chinensis
Sc06g0008110 Simmondsia chinensis
Sed0002670 Sechium edule
Sed0002861 Sechium edule
Sed0016682 Sechium edule
Sed0017545 Sechium edule
Sed0018105 Sechium edule
Sed0019354 Sechium edule
Sed0021050 Sechium edule
Sed0021430 Sechium edule
Sed0027460 Sechium edule
SEGI_04572 Sequoiadendron giganteum
SEGI_19102 Sequoiadendron giganteum
SEGI_25580 Sequoiadendron giganteum
SEGI_35340 Sequoiadendron giganteum
SEGI_39154 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32989 Striga asiatica
SGA_v2.0_scaffold120G32992 Striga asiatica
SGA_v2.0_scaffold120G32993 Striga asiatica
SGA_v2.0_scaffold3152G54284 Striga asiatica
SGA_v2.0_scaffold77G25355 Striga asiatica
SGA_v2.0_scaffold77G25358 Striga asiatica
SMO172G0204 Selaginella moellendorffii
Solyc05g047530.3 Solanum lycopersicum
Solyc06g150137.1 Solanum lycopersicum
Sopen05g027840 Solanum pennellii
Sopen06g033940 Solanum pennellii
Sopen06g033950 Solanum pennellii
Sp4g13010 Schrenkiella parvula
Sp4g13030 Schrenkiella parvula
Sp4g13040 Schrenkiella parvula
TAR369G0625 Trochodendron aralioides
TAR623G1441 Trochodendron aralioides
TAR633G2696 Trochodendron aralioides
TAR636G0009 Trochodendron aralioides
THA.LOC104800793 Tarenaya hassleriana
THA.LOC104808912 Tarenaya hassleriana
THA.LOC104815825 Tarenaya hassleriana
THA.LOC104815827 Tarenaya hassleriana
Thecc.09G194900 Theobroma cacao
Thecc.09G364200 Theobroma cacao
Thecc.10G184100 Theobroma cacao
Thhalv10016544m.g Eutrema salsugineum
Thhalv10016545m.g Eutrema salsugineum
Thhalv10017756m.g Eutrema salsugineum
Thhalv10017933m.g Eutrema salsugineum
TPR.G18297 Trifolium pratense
TPR.G26280 Trifolium pratense
TPR.G36298 Trifolium pratense
TPR.G7476 Trifolium pratense
TWI34G0197 Tripterygium wilfordii
TWI34G1276 Tripterygium wilfordii
TWI75G0178 Tripterygium wilfordii
TWI79G0979 Tripterygium wilfordii
unitig_22.g5201 Utricularia gibba
unitig_22.g5202 Utricularia gibba
unitig_60.g25713 Utricularia gibba
unitig_747.g21445 Utricularia gibba
vmacro02872 Vaccinium macrocarpon
vmacro06326 Vaccinium macrocarpon
vmacro14642 Vaccinium macrocarpon
VMungo0540G1878 Vigna mungo
VMungo0647G1236 Vigna mungo
Zm00001eb240910 Zea mays
Zm00001eb285030 Zea mays
Zm00001eb346150 Zea mays
Zm00001eb368900 Zea mays

User provided reference genes

Program Settings