Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p22510 Brassica napus
A04p29230 Brassica napus
A04p30110 Brassica napus
A05p06400 Brassica napus
A05p39850 Brassica napus
Aa31LG1G22900 Aethionema arabicum
Aa31LG3G1540 Aethionema arabicum
Aa31LG5G19550 Aethionema arabicum
Aa31sc189G80 Aethionema arabicum
Actinidia00940 Actinidia chinensis
Actinidia00941 Actinidia chinensis
Actinidia11600 Actinidia chinensis
Actinidia13930 Actinidia chinensis
Actinidia29110 Actinidia chinensis
Actinidia29692 Actinidia chinensis
Actinidia33932 Actinidia chinensis
Ah.10g036510 Amaranthus hybridus
Ah.16g103400 Amaranthus hybridus
AL3G20020 Arabidopsis lyrata
AL4G37690 Arabidopsis lyrata
AL6G10890 Arabidopsis lyrata
Aqoxy2G00919 Aquilegia oxysepala
Aqoxy4G02605 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1VS4ZL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.238B6D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.84M4BY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C1QEAM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CY1II1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G8RZTB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I8BS46 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P8UNKF Arachis hypogaea
AT2G38160 Arabidopsis thaliana
AT2G40070 Arabidopsis thaliana
AT3G09000 Arabidopsis thaliana
AT5G01280 Arabidopsis thaliana
ATR0618G241 Amborella trichopoda
ATR0743G259 Amborella trichopoda
Atru.chr12.18 Acer truncatum
Atru.chr8.2224 Acer truncatum
AUR62012234 Chenopodium quinoa
AUR62022866 Chenopodium quinoa
BcaB01g03592 Brassica carinata
BcaB02g09056 Brassica carinata
BcaB02g09057 Brassica carinata
BcaB05g21936 Brassica carinata
BcaB06g29034 Brassica carinata
BcaB06g29123 Brassica carinata
BcaB06g29126 Brassica carinata
BcaC01g05440 Brassica carinata
BcaC02g07348 Brassica carinata
BcaC02g07490 Brassica carinata
BcaC03g13071 Brassica carinata
BcaC05g29634 Brassica carinata
BcaC09g48001 Brassica carinata
BcaC09g48046 Brassica carinata
BNapus_Darmor_BZH_scaffold_167p00230 Brassica napus
BolC1t05482H Brassica oleracea
BolC2t06022H Brassica oleracea
BolC3t15051H Brassica oleracea
BolC4t22362H Brassica oleracea
BolC4t28150H Brassica oleracea
BolC5t34541H Brassica oleracea
BraA01t04323Z Brassica rapa
BraA02t04696Z Brassica rapa
BraA03t11477Z Brassica rapa
BraA05t19608Z Brassica rapa
BraA05t22769Z Brassica rapa
C02p00240 Brassica napus
C03p26660 Brassica napus
C04p07410 Brassica napus
C04p66460 Brassica napus
C05p58890 Brassica napus
CAN.G301.5 Capsicum annuum
CAN.G503.8 Capsicum annuum
CAN.G772.9 Capsicum annuum
CANSAT35G1762 Cannabis sativa
CANSAT56G0325 Cannabis sativa
CANSAT56G4542 Cannabis sativa
CARHR083340 Cardamine hirsuta
CARHR132760 Cardamine hirsuta
CARHR135010 Cardamine hirsuta
CARHR211620 Cardamine hirsuta
Carub.0003s0813 Capsella rubella
Carub.0004s2014 Capsella rubella
Carub.0004s2221 Capsella rubella
Carub.0006s0060 Capsella rubella
Ca_05952_v3 Cicer arietinum L.
Ca_07629_v3 Cicer arietinum L.
Ca_15267_v3 Cicer arietinum L.
Cc02_g06660 Coffea canephora
Cc06_g17360 Coffea canephora
CDE03G0399 Ceratophyllum demersum
CDE03G0491 Ceratophyllum demersum
CDE04G2671 Ceratophyllum demersum
CDE04G3120 Ceratophyllum demersum
CDE07G0205 Ceratophyllum demersum
Cfa001331 Carpinus fangiana
Cfa017216 Carpinus fangiana
Ciclev10011390m.g Citrus clementina
Ciclev10030993m.g Citrus clementina
CiPaw.01G297400 Carya illinoinensis
CiPaw.02G191300 Carya illinoinensis
CiPaw.02G191500 Carya illinoinensis
CiPaw.09G208300 Carya illinoinensis
ClCG04G007120 Citrullus lanatus
ClCG11G006220 Citrullus lanatus
COL.COLO4_14547 Corchorus olitorius
COL.COLO4_25689 Corchorus olitorius
Cpa.g.sc163.20 Carica papaya
Cpa.g.sc19.190 Carica papaya
CsaV3_4G026130 Cucumis sativus L.
CsaV3_6G001770 Cucumis sativus L.
CSS0031125 Camellia sinensis var. sinensis
DCAR_011804 Daucus carota
DCAR_024834 Daucus carota
DCAR_028566 Daucus carota
DCAR_028842 Daucus carota
Dinv17980 Davidia involucrata
Dinv23092 Davidia involucrata
Dinv34396 Davidia involucrata
Duzib093G2086 Durio zibethinus
Duzib106G1464 Durio zibethinus
Duzib106G1667 Durio zibethinus
Duzib114G0676 Durio zibethinus
Duzib128G0280 Durio zibethinus
ECA233G1150 Erigeron canadensis
ECA236G4897 Erigeron canadensis
ECA238G2369 Erigeron canadensis
EL10Ac2g04813 Beta vulgaris
Eucgr.G03055 Eucalyptus grandis
FAN01G1543 Fragaria x ananassa
FAN01G2663 Fragaria x ananassa
FAN02G3477 Fragaria x ananassa
FAN03G2510 Fragaria x ananassa
FAN05G1780 Fragaria x ananassa
FAN05G4567 Fragaria x ananassa
FAN06G1153 Fragaria x ananassa
FAN06G1458 Fragaria x ananassa
FAN09G1606 Fragaria x ananassa
FAN10G2989 Fragaria x ananassa
FAN14G0995 Fragaria x ananassa
FAN14G1428 Fragaria x ananassa
FvH4_6g11590 Fragaria vesca
FvH4_7g24310 Fragaria vesca
FvH4_7g24320 Fragaria vesca
Glyma.02G256600 Glycine max
Glyma.07G148600 Glycine max
Glyma.11G228400 Glycine max
Glyma.14G060100 Glycine max
Glyma.15G036000 Glycine max
Glyma.18G028700 Glycine max
Glyma.18G199700 Glycine max
Gohir.A04G089500 Gossypium hirsutum
Gohir.A05G329400 Gossypium hirsutum
Gohir.A10G234900 Gossypium hirsutum
Gohir.D04G067400 Gossypium hirsutum
Gohir.D04G129700 Gossypium hirsutum
Gohir.D10G247300 Gossypium hirsutum
Gorai.011G285700 Gossypium raimondii
Gorai.012G076400 Gossypium raimondii
Gorai.012G113200 Gossypium raimondii
GSVIVG01032844001 Vitis vinifera
GSVIVG01033970001 Vitis vinifera
GSVIVG01033971001 Vitis vinifera
HanXRQChr06g0182271 Helianthus annuus
HanXRQChr08g0222141 Helianthus annuus
HanXRQChr10g0317301 Helianthus annuus
HanXRQChr12g0370531 Helianthus annuus
HanXRQChr14g0459861 Helianthus annuus
HanXRQChr16g0510441 Helianthus annuus
Haze_20991 Corylus avellana
Hma1.2p1_0281F.1_g113000 Hydrangea macrophylla
Hma1.2p1_0446F.1_g154590 Hydrangea macrophylla
Hma1.2p1_0446F.1_g154640 Hydrangea macrophylla
HPP92_019257 Vanilla planifolia
Hund13841 Selenicereus undatus
Hund13843 Selenicereus undatus
Hund15950 Selenicereus undatus
Lalb_Chr03g0043161 Lupinus albus
Lalb_Chr10g0105111 Lupinus albus
Lalb_Chr15g0084191 Lupinus albus
Lalb_Chr17g0346721 Lupinus albus
Lalb_Chr17g0346731 Lupinus albus
Lalb_Chr18g0052641 Lupinus albus
Lalb_Chr19g0124681 Lupinus albus
Lj1A953G44 Lonicera japonica
Lj1g0022400 Lotus japonicus
Lj3A954T67 Lonicera japonica
Lj6g0015169 Lotus japonicus
Lj8C68G6 Lonicera japonica
LjContig00142g0017848 Lotus japonicus
LjContig00357g0006827 Lotus japonicus
Lsat_1_v5_gn_2_122761 Lactuca sativa
Lsat_1_v5_gn_8_100261 Lactuca sativa
Lsat_1_v5_gn_8_12340 Lactuca sativa
Manes.07G128300 Manihot esculenta
Manes.08G091400 Manihot esculenta
Manes.10G014000 Manihot esculenta
MBI02_g39000_MAGBIO Magnolia biondii
MBI03_g07299_MAGBIO Magnolia biondii
MBI05_g34494_MAGBIO Magnolia biondii
MBI07_g10349_MAGBIO Magnolia biondii
MBI14_g02813_MAGBIO Magnolia biondii
MBI14_g28262_MAGBIO Magnolia biondii
MBI19_g27176_MAGBIO Magnolia biondii
MD01G1132400 Malus domestica
MD04G1150900 Malus domestica
MD07G1220000 Malus domestica
MD07G1220200 Malus domestica
MD12G1164800 Malus domestica
Medtr3g070300 Medicago truncatula
Medtr3g076760 Medicago truncatula
Medtr5g082480 Medicago truncatula
Medtr7g068220 Medicago truncatula
MELO3C003241.2 Cucumis melo
MELO3C008291.2 Cucumis melo
Migut.F00675 Erythranthe guttata
Migut.L02005 Erythranthe guttata
MSTRG.10225 Avicennia marina
MSTRG.26805 Avicennia marina
MSTRG.27324 Avicennia marina
MSTRG.8950 Avicennia marina
Nitab4.5_0000335g0170 Nicotiana tabacum
Nitab4.5_0000802g0030 Nicotiana tabacum
Nitab4.5_0002100g0020 Nicotiana tabacum
Nitab4.5_0003138g0040 Nicotiana tabacum
Nitab4.5_0004338g0070 Nicotiana tabacum
Nitab4.5_0005290g0030 Nicotiana tabacum
Nitab4.5_0005776g0030 Nicotiana tabacum
Nitab4.5_0008493g0010 Nicotiana tabacum
Nn2g11138 Nelumbo nucifera
Nn2g11456 Nelumbo nucifera
Nn2g13688 Nelumbo nucifera
Nn4g23984 Nelumbo nucifera
Nn4g24424 Nelumbo nucifera
Oeu025644.2 Olea europaea
Oeu048249.1 Olea europaea
Oeu055166.1 Olea europaea
Oeu064385.2 Olea europaea
Oeu064509.1 Olea europaea
Os01g0141900 Oryza sativa ssp. japonica
Peaxi162Scf00141g00032 Petunia axillaris
Peaxi162Scf00825g00020 Petunia axillaris
Peaxi162Scf00957g00225 Petunia axillaris
Peaxi162Scf01208g00017 Petunia axillaris
Peaxi162Scf01208g00150 Petunia axillaris
PGR031G2851 Punica granatum
PGR142G0208 Punica granatum
PGSC0003DMG400007777 Solanum tuberosum
PGSC0003DMG400008491 Solanum tuberosum
PGSC0003DMG400011934 Solanum tuberosum
PGSC0003DMG400020745 Solanum tuberosum
PGSC0003DMG400030264 Solanum tuberosum
PGSC0003DMG401011931 Solanum tuberosum
PGSC0003DMG401023302 Solanum tuberosum
PGSC0003DMG401027184 Solanum tuberosum
PGSC0003DMG402011931 Solanum tuberosum
PGSC0003DMG402027184 Solanum tuberosum
Phvul.001G241800 Phaseolus vulgaris
Phvul.008G105200 Phaseolus vulgaris
Phvul.008G224800 Phaseolus vulgaris
Potri.008G066900 Populus trichocarpa
Potri.010G190300 Populus trichocarpa
Potri.016G114900 Populus trichocarpa
Prupe.2G248600 Prunus persica
Prupe.6G275700 Prunus persica
Psat2g033680 Pisum sativum
Psat3g128880 Pisum sativum
Psat5g126440 Pisum sativum
PSO339G2624 Papaver somniferum
PSO339G3119 Papaver somniferum
PSO384G0402 Papaver somniferum
PSO801G0843 Papaver somniferum
RcHm_v2.0_Chr1g0369941 Rosa chinensis
RcHm_v2.0_Chr1g0369981 Rosa chinensis
RcHm_v2.0_Chr3g0463271 Rosa chinensis
Rhsim03G0142000 Rhododendron simsii
Rhsim05G0213600 Rhododendron simsii
Sabra08G0049000 Salix brachista
Sabra10G0146700 Salix brachista
Sabra16G0110800 Salix brachista
SalBow4G2930 Salvia bowleyana
SalBow5G0519 Salvia bowleyana
SalBow5G2913 Salvia bowleyana
SalBow6G0604 Salvia bowleyana
Sc10g0002280 Simmondsia chinensis
Sed0016379 Sechium edule
Sed0027201 Sechium edule
SEGI_04024 Sequoiadendron giganteum
SEGI_29321 Sequoiadendron giganteum
SEGI_32275 Sequoiadendron giganteum
SEGI_36412 Sequoiadendron giganteum
SGA_v2.0_scaffold110G31223 Striga asiatica
SGA_v2.0_scaffold240G44099 Striga asiatica
SGA_v2.0_scaffold44G16687 Striga asiatica
SGA_v2.0_scaffold60G20991 Striga asiatica
SGA_v2.0_scaffold75G25016 Striga asiatica
SHI03472 Sapria himalayana
SHI03473 Sapria himalayana
Solyc03g096090.4 Solanum lycopersicum
Solyc03g096180.4 Solanum lycopersicum
Solyc04g150148.1 Solanum lycopersicum
Solyc05g052715.1 Solanum lycopersicum
Solyc09g014490.4 Solanum lycopersicum
Sopen03g026190 Solanum pennellii
Sopen03g026220 Solanum pennellii
Sopen03g026280 Solanum pennellii
Sopen05g031250 Solanum pennellii
Sopen09g007320 Solanum pennellii
Sp3g07420 Schrenkiella parvula
Sp4g20480 Schrenkiella parvula
Sp4g22360 Schrenkiella parvula
Sp6g40610 Schrenkiella parvula
TAR369G0785 Trochodendron aralioides
THA.LOC104805834 Tarenaya hassleriana
THA.LOC104810086 Tarenaya hassleriana
THA.LOC104810417 Tarenaya hassleriana
THA.LOC104816208 Tarenaya hassleriana
THA.LOC104823383 Tarenaya hassleriana
Thecc.05G017500 Theobroma cacao
Thecc.10G020700 Theobroma cacao
Thhalv10013437m.g Eutrema salsugineum
Thhalv10016404m.g Eutrema salsugineum
Thhalv10017516m.g Eutrema salsugineum
Thhalv10020521m.g Eutrema salsugineum
TPR.G2544 Trifolium pratense
TPR.G38433 Trifolium pratense
TPR.G38435 Trifolium pratense
TPR.G8144 Trifolium pratense
TWI74G0539 Tripterygium wilfordii
TWI77G0036 Tripterygium wilfordii
unitig_37.g12462 Utricularia gibba
unitig_46.g18736 Utricularia gibba
unitig_46.g18737 Utricularia gibba
vmacro06978 Vaccinium macrocarpon
vmacro20253 Vaccinium macrocarpon
VMungo0647G2500 Vigna mungo
VMungo1383G0091 Vigna mungo
VMungo1383G1892 Vigna mungo
VMungo1383G2844 Vigna mungo
Zm00001eb124690 Zea mays
Zm00001eb335660 Zea mays

User provided reference genes

Program Settings