Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p32220 Brassica napus
A04p34180 Brassica napus
A05p05940 Brassica napus
A05p05970 Brassica napus
A07p23240 Brassica napus
A09p50030 Brassica napus
A09p50040 Brassica napus
Aa31LG1G27390 Aethionema arabicum
Aa31LG2G20640 Aethionema arabicum
Aa31LG5G590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2511 Anthoceros agrestis
Actinidia02837 Actinidia chinensis
Actinidia10039 Actinidia chinensis
Actinidia10041 Actinidia chinensis
Actinidia20895 Actinidia chinensis
Ah.05g180510 Amaranthus hybridus
Ah.05g180520 Amaranthus hybridus
AL4G45210 Arabidopsis lyrata
AL6G53090 Arabidopsis lyrata
AL7G22330 Arabidopsis lyrata
Aqoxy2G04021 Aquilegia oxysepala
Aqoxy7G00278 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2X3TQS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.69YTHK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9GVB5D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D25PMP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E5DFEG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FEJ64N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IGP217 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IM3547 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IR4EKV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NC5V2N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SID920 Arachis hypogaea
AT2G45980 Arabidopsis thaliana
AT4G00355 Arabidopsis thaliana
AT4G29910 Arabidopsis thaliana
ATR0068G004 Amborella trichopoda
ATR0680G064 Amborella trichopoda
Atru.chr5.509 Acer truncatum
Atru.chr5.510 Acer truncatum
AUR62004371 Chenopodium quinoa
AUR62004372 Chenopodium quinoa
AUR62022580 Chenopodium quinoa
AUR62022581 Chenopodium quinoa
BcaB01g02169 Brassica carinata
BcaB02g07621 Brassica carinata
BcaB02g07622 Brassica carinata
BcaC01g06884 Brassica carinata
BcaC02g12160 Brassica carinata
BcaC07g40027 Brassica carinata
BcaC07g40045 Brassica carinata
BcaC07g40074 Brassica carinata
BcaC08g44822 Brassica carinata
BcaC08g44824 Brassica carinata
BcaNung05902 Brassica carinata
BolC3t16197H Brassica oleracea
BolC4t22309H Brassica oleracea
BolC4t22311H Brassica oleracea
BolC4t28695H Brassica oleracea
BolC6t37570H Brassica oleracea
BolC8t50859H Brassica oleracea
BraA03t12392Z Brassica rapa
BraA04t18879Z Brassica rapa
BraA05t19557Z Brassica rapa
BraA05t19560Z Brassica rapa
BraA07t29988Z Brassica rapa
BraA09t40455Z Brassica rapa
C03p39260 Brassica napus
C04p06870 Brassica napus
C04p06900 Brassica napus
C04p71970 Brassica napus
C06p24120 Brassica napus
C06p24140 Brassica napus
C08p32440 Brassica napus
C09p49930 Brassica napus
CAN.G116.9 Capsicum annuum
CAN.G78.90 Capsicum annuum
CAN.G78.91 Capsicum annuum
CANSAT21G1319 Cannabis sativa
CANSAT56G3724 Cannabis sativa
CARHR141250 Cardamine hirsuta
CARHR237820 Cardamine hirsuta
CARHR248450 Cardamine hirsuta
Carub.0002s1689 Capsella rubella
Carub.0004s2868 Capsella rubella
Carub.0006s3688 Capsella rubella
Carub.0007s1073 Capsella rubella
Ca_07928_v3 Cicer arietinum L.
Ca_07929_v3 Cicer arietinum L.
CBR_g46437 Chara braunii
CBR_g58810 Chara braunii
Cc02_g38160 Coffea canephora
Cc02_g38170 Coffea canephora
CDE05G2831 Ceratophyllum demersum
CDE08G0634 Ceratophyllum demersum
CDE08G0676 Ceratophyllum demersum
Cfa003907 Carpinus fangiana
Cfa026360 Carpinus fangiana
Ciclev10019660m.g Citrus clementina
Ciclev10021244m.g Citrus clementina
CiPaw.01G062800 Carya illinoinensis
CiPaw.01G062900 Carya illinoinensis
CiPaw.02G032000 Carya illinoinensis
ClCG05G001470 Citrullus lanatus
ClCG06G003620 Citrullus lanatus
COL.COLO4_12725 Corchorus olitorius
Cpa.g.sc11.17 Carica papaya
Cpa.g.sc11.19 Carica papaya
Cre07.g355200 Chlamydomonas reinhardtii
CsaV3_3G008850 Cucumis sativus L.
CsaV3_6G000620 Cucumis sativus L.
CSS0009302 Camellia sinensis var. sinensis
CSS0022743 Camellia sinensis var. sinensis
CSS0032978 Camellia sinensis var. sinensis
DCAR_007445 Daucus carota
DCAR_007446 Daucus carota
DCAR_025195 Daucus carota
Dinv32493 Davidia involucrata
Dinv43826 Davidia involucrata
Dinv43827 Davidia involucrata
Duzib133G0433 Durio zibethinus
Duzib138G1334 Durio zibethinus
Duzib138G1880 Durio zibethinus
ECA236G3632 Erigeron canadensis
ECA236G3836 Erigeron canadensis
ECA236G4017 Erigeron canadensis
EL10Ac1g00401 Beta vulgaris
EL10Ac1g00402 Beta vulgaris
Eucgr.D01236 Eucalyptus grandis
Eucgr.D02304 Eucalyptus grandis
Eucgr.E00120 Eucalyptus grandis
Eucgr.L01587 Eucalyptus grandis
FAN01G0375 Fragaria x ananassa
FAN03G0610 Fragaria x ananassa
FAN03G1293 Fragaria x ananassa
FAN06G1763 Fragaria x ananassa
FAN06G3089 Fragaria x ananassa
FAN06G3551 Fragaria x ananassa
FAN06G4809 Fragaria x ananassa
FAN10G1179 Fragaria x ananassa
FAN10G1478 Fragaria x ananassa
FAN10G2559 Fragaria x ananassa
FAN10G3665 Fragaria x ananassa
FAN15G3430 Fragaria x ananassa
FAN22G1210 Fragaria x ananassa
FAN24G1219 Fragaria x ananassa
FAN27G0066 Fragaria x ananassa
FAN27G1352 Fragaria x ananassa
FvH4_2g10051 Fragaria vesca
FvH4_2g10060 Fragaria vesca
FvH4_2g10061 Fragaria vesca
FvH4_7g14490 Fragaria vesca
FvH4_7g14520 Fragaria vesca
Glyma.09G258600 Glycine max
Glyma.09G258700 Glycine max
Glyma.18G234000 Glycine max
Glyma.18G234100 Glycine max
Gohir.A11G089700 Gossypium hirsutum
Gohir.A11G089800 Gossypium hirsutum
Gohir.D11G094000 Gossypium hirsutum
Gohir.D11G094100 Gossypium hirsutum
Gorai.007G100400 Gossypium raimondii
Gorai.007G100500 Gossypium raimondii
GSVIVG01008477001 Vitis vinifera
GSVIVG01026948001 Vitis vinifera
HanXRQChr04g0121151 Helianthus annuus
HanXRQChr04g0121161 Helianthus annuus
HanXRQChr13g0426611 Helianthus annuus
Haze_15511 Corylus avellana
Hma1.2p1_0780F.1_g216750 Hydrangea macrophylla
Hma1.2p1_0780F.1_g216780 Hydrangea macrophylla
HPP92_014720 Vanilla planifolia
HPP92_019868 Vanilla planifolia
HPP92_025783 Vanilla planifolia
Hund16654 Selenicereus undatus
Hund27265 Selenicereus undatus
Lalb_Chr11g0072911 Lupinus albus
Lalb_Chr13g0304081 Lupinus albus
Lalb_Chr23g0275821 Lupinus albus
Lj1g0000866 Lotus japonicus
Lj1g0025308 Lotus japonicus
Lj6A572T61 Lonicera japonica
Lj6A572T62 Lonicera japonica
Lj6A578T43 Lonicera japonica
Lj6C572T1 Lonicera japonica
Lj6P578T28 Lonicera japonica
Lj7A511T78 Lonicera japonica
Lj7P510T18 Lonicera japonica
Lj9A584T67 Lonicera japonica
Lsat_1_v5_gn_7_4301 Lactuca sativa
Lsat_1_v5_gn_7_4881 Lactuca sativa
Lsat_1_v5_gn_8_68820 Lactuca sativa
Manes.01G255700 Manihot esculenta
Manes.05G033200 Manihot esculenta
Manes.05G033300 Manihot esculenta
Mapoly0022s0094 Marchantia polymorpha
Mapoly0177s0008 Marchantia polymorpha
MBI04_g28752_MAGBIO Magnolia biondii
MBI04_g47116_MAGBIO Magnolia biondii
MBI17_g35262_MAGBIO Magnolia biondii
MBI17_g42624_MAGBIO Magnolia biondii
MBI18_g02843_MAGBIO Magnolia biondii
MCO11G226 Micromonas commoda
MD01G1065000 Malus domestica
MD01G1065100 Malus domestica
MD07G1135300 Malus domestica
MD07G1135400 Malus domestica
Medtr2g027720 Medicago truncatula
Medtr7g077840 Medicago truncatula
Medtr7g077860 Medicago truncatula
MELO3C006104.2 Cucumis melo
MELO3C021204.2 Cucumis melo
Migut.B01766 Erythranthe guttata
Migut.B01767 Erythranthe guttata
Migut.M00740 Erythranthe guttata
MSTRG.12873 Avicennia marina
MSTRG.14225 Avicennia marina
Nitab4.5_0000386g0060 Nicotiana tabacum
Nitab4.5_0000583g0190 Nicotiana tabacum
Nitab4.5_0000583g0200 Nicotiana tabacum
Nitab4.5_0006018g0030 Nicotiana tabacum
Nitab4.5_0006018g0050 Nicotiana tabacum
Nitab4.5_0008206g0010 Nicotiana tabacum
Nn1g01562 Nelumbo nucifera
Nn6g33385 Nelumbo nucifera
Nn6g33390 Nelumbo nucifera
Oeu005388.3 Olea europaea
Oeu015817.1 Olea europaea
Oeu031215.1 Olea europaea
Oeu050467.2 Olea europaea
Oeu051126.2 Olea europaea
Oeu061351.3 Olea europaea
Os02g0821900 Oryza sativa ssp. japonica
Os03g0759500 Oryza sativa ssp. japonica
Os04g0165300 Oryza sativa ssp. japonica
Os07g0418200 Oryza sativa ssp. japonica
Peaxi162Scf00008g02423 Petunia axillaris
Peaxi162Scf00020g00723 Petunia axillaris
Peaxi162Scf00020g00730 Petunia axillaris
PGR004G0833 Punica granatum
PGR031G2850 Punica granatum
PGR042G2528 Punica granatum
PGSC0003DMG400000174 Solanum tuberosum
PGSC0003DMG400000175 Solanum tuberosum
PGSC0003DMG400006504 Solanum tuberosum
Phvul.008G061700 Phaseolus vulgaris
Phvul.008G061800 Phaseolus vulgaris
Potri.001G135975 Populus trichocarpa
Potri.002G160700 Populus trichocarpa
Potri.014G085900 Populus trichocarpa
Potri.014G086000 Populus trichocarpa
Pp3c15_17300 Physcomitrium patens
Pp3c17_13600 Physcomitrium patens
Pp3c9_18340 Physcomitrium patens
PRCOL_00005952 Prasinoderma coloniale
Prupe.2G172000 Prunus persica
Prupe.2G172100 Prunus persica
Psat3g108000 Pisum sativum
Psat4g001160 Pisum sativum
PSO017G3573 Papaver somniferum
PSO063G1799 Papaver somniferum
PSO339G3045 Papaver somniferum
PSO384G0118 Papaver somniferum
PSO478G2649 Papaver somniferum
PSO782G1204 Papaver somniferum
PSO782G3581 Papaver somniferum
QL04p053597 Quercus lobata
QL04p053608 Quercus lobata
RcHm_v2.0_Chr1g0355901 Rosa chinensis
RcHm_v2.0_Chr1g0355951 Rosa chinensis
RcHm_v2.0_Chr2g0161261 Rosa chinensis
Rhsim01G0159000 Rhododendron simsii
Rhsim07G0013800 Rhododendron simsii
Rhsim07G0013900 Rhododendron simsii
Sabra02G0127500 Salix brachista
Sabra14G0062200 Salix brachista
Sabra14G0062300 Salix brachista
SalBow3G0216 Salvia bowleyana
SalBow3G4075 Salvia bowleyana
SalBow8G4919 Salvia bowleyana
Sc01g0003490 Simmondsia chinensis
Sc23g0002810 Simmondsia chinensis
Sc26g0000880 Simmondsia chinensis
Sed0000605 Sechium edule
Sed0006621 Sechium edule
Sed0020685 Sechium edule
SEGI_03119 Sequoiadendron giganteum
SEGI_07880 Sequoiadendron giganteum
SEGI_37364 Sequoiadendron giganteum
SGA_v2.0_scaffold2881G54235 Striga asiatica
SGA_v2.0_scaffold4G02300 Striga asiatica
SGA_v2.0_scaffold4G02302 Striga asiatica
SGA_v2.0_scaffold55G19707 Striga asiatica
SGA_v2.0_scaffold95G28831 Striga asiatica
SMO112G0035 Selaginella moellendorffii
SMO147G0283 Selaginella moellendorffii
SMO147G0299 Selaginella moellendorffii
SMO364G0089 Selaginella moellendorffii
Solyc01g094760.3 Solanum lycopersicum
Solyc10g012420.3 Solanum lycopersicum
Sopen01g038540 Solanum pennellii
Sopen01g038550 Solanum pennellii
Sopen10g006250 Solanum pennellii
Sp4g28050 Schrenkiella parvula
Sp5g05460 Schrenkiella parvula
Sp6g00430 Schrenkiella parvula
TAR374G1741 Trochodendron aralioides
TAR375G1105 Trochodendron aralioides
TAR629G3070 Trochodendron aralioides
TAR636G0324 Trochodendron aralioides
TAR636G2317 Trochodendron aralioides
THA.LOC104802035 Tarenaya hassleriana
THA.LOC104817027 Tarenaya hassleriana
THA.LOC104817300 Tarenaya hassleriana
THA.LOC104825845 Tarenaya hassleriana
THA.LOC104825846 Tarenaya hassleriana
Thecc.01G357700 Theobroma cacao
Thecc.01G357800 Theobroma cacao
Thhalv10001583m.g Eutrema salsugineum
Thhalv10005869m.g Eutrema salsugineum
Thhalv10027287m.g Eutrema salsugineum
Thhalv10029186m.g Eutrema salsugineum
TPR.G16202 Trifolium pratense
TPR.G26686 Trifolium pratense
TPR.G37799 Trifolium pratense
TPR.G37845 Trifolium pratense
TWI23G0808 Tripterygium wilfordii
TWI59G0730 Tripterygium wilfordii
TWI73G0882 Tripterygium wilfordii
unitig_749.g13536 Utricularia gibba
unitig_8.g3798 Utricularia gibba
vmacro13268 Vaccinium macrocarpon
vmacro20933 Vaccinium macrocarpon
VMungo1383G1901 Vigna mungo
VMungo1383G2450 Vigna mungo
Zm00001eb057980 Zea mays
Zm00001eb087910 Zea mays
Zm00001eb103050 Zea mays
Zm00001eb191080 Zea mays
Zm00001eb214490 Zea mays
Zm00001eb305930 Zea mays
Zm00001eb318800 Zea mays
Zm00001eb415260 Zea mays

User provided reference genes

Program Settings