Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00760 Brassica napus
A02p22050 Brassica napus
A03p65860 Brassica napus
A04p16790 Brassica napus
A05p23470 Brassica napus
Aa31LG6G15390 Aethionema arabicum
Aa31LG6G8910 Aethionema arabicum
Aa31LG7G14500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5059 Anthoceros agrestis
Actinidia10316 Actinidia chinensis
Actinidia28164 Actinidia chinensis
Actinidia29585 Actinidia chinensis
Actinidia33143 Actinidia chinensis
Ah.02g122470 Amaranthus hybridus
AL1G50750 Arabidopsis lyrata
AL2G38460 Arabidopsis lyrata
AL4G11760 Arabidopsis lyrata
AL7G12094 Arabidopsis lyrata
Aqoxy6G00807 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FN3JIV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L3HR8A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T2745Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UQ4DQD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WC5N1Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X24JN2 Arachis hypogaea
AT1G35780 Arabidopsis thaliana
AT1G78150 Arabidopsis thaliana
AT2G22270 Arabidopsis thaliana
AT4G39860 Arabidopsis thaliana
ATR0753G061 Amborella trichopoda
Atru.chr13.1205 Acer truncatum
Atru.chr4.69 Acer truncatum
AUR62002013 Chenopodium quinoa
AUR62003789 Chenopodium quinoa
AUR62018899 Chenopodium quinoa
AUR62018903 Chenopodium quinoa
AUR62027746 Chenopodium quinoa
AUR62037336 Chenopodium quinoa
AUR62041762 Chenopodium quinoa
AUR62043009 Chenopodium quinoa
BcaB05g25122 Brassica carinata
BcaC02g08675 Brassica carinata
BcaC02g08718 Brassica carinata
BcaC03g15798 Brassica carinata
BcaC05g27708 Brassica carinata
BcaNung00906 Brassica carinata
BcaNung00907 Brassica carinata
BcaNung02305 Brassica carinata
BcaNung03402 Brassica carinata
BcaNung06394 Brassica carinata
BolC1t00088H Brassica oleracea
BolC2t09557H Brassica oleracea
BolC4t26728H Brassica oleracea
BolC5t32438H Brassica oleracea
BraA01t00079Z Brassica rapa
BraA02t07208Z Brassica rapa
BraA03t15638Z Brassica rapa
BraA04t17312Z Brassica rapa
BraA05t21214Z Brassica rapa
C01p00870 Brassica napus
C02p35440 Brassica napus
C04p51370 Brassica napus
C05p36900 Brassica napus
C07p62830 Brassica napus
CAN.G151.33 Capsicum annuum
CAN.G1836.5 Capsicum annuum
CAN.G454.2 Capsicum annuum
CARHR034580 Cardamine hirsuta
CARHR071610 Cardamine hirsuta
CARHR113500 Cardamine hirsuta
CARHR246840 Cardamine hirsuta
Carub.0001s3350 Capsella rubella
Carub.0002s2504 Capsella rubella
Carub.0004s0142 Capsella rubella
Carub.0007s0179 Capsella rubella
Ca_15246_v3 Cicer arietinum L.
Ca_17734_v3 Cicer arietinum L.
CBR_g48189 Chara braunii
Cc07_g15290 Coffea canephora
Cc10_g07320 Coffea canephora
CDE05G2476 Ceratophyllum demersum
CDE05G3227 Ceratophyllum demersum
CDE10G0211 Ceratophyllum demersum
Cfa002669 Carpinus fangiana
Cfa013627 Carpinus fangiana
Ciclev10001961m.g Citrus clementina
Ciclev10026169m.g Citrus clementina
CiPaw.04G099100 Carya illinoinensis
CiPaw.05G129700 Carya illinoinensis
CiPaw.07G180800 Carya illinoinensis
CiPaw.08G044300 Carya illinoinensis
ClCG01G018780 Citrullus lanatus
ClCG08G011050 Citrullus lanatus
COL.COLO4_09958 Corchorus olitorius
COL.COLO4_16419 Corchorus olitorius
Cpa.g.sc213.14 Carica papaya
Cpa.g.sc36.124 Carica papaya
CsaV3_2G024230 Cucumis sativus L.
CsaV3_6G045450 Cucumis sativus L.
CSS0007650 Camellia sinensis var. sinensis
CSS0011504 Camellia sinensis var. sinensis
CSS0041152 Camellia sinensis var. sinensis
CSS0046355 Camellia sinensis var. sinensis
DCAR_003499 Daucus carota
DCAR_008725 Daucus carota
Dinv13024 Davidia involucrata
Dinv13185 Davidia involucrata
Dinv18330 Davidia involucrata
Dinv21912 Davidia involucrata
Dinv44765 Davidia involucrata
Dinv44813 Davidia involucrata
Duzib041G0444 Durio zibethinus
Duzib093G0979 Durio zibethinus
Duzib116G0566 Durio zibethinus
Duzib147G1606 Durio zibethinus
ECA232G2096 Erigeron canadensis
ECA232G2149 Erigeron canadensis
ECA246G2139 Erigeron canadensis
EL10Ac1g01231 Beta vulgaris
EL10Ac6g15098 Beta vulgaris
Eucgr.F00307 Eucalyptus grandis
Eucgr.F00310 Eucalyptus grandis
Eucgr.F00312 Eucalyptus grandis
Eucgr.F02435 Eucalyptus grandis
FAN03G0345 Fragaria x ananassa
FAN04G0498 Fragaria x ananassa
FAN04G3246 Fragaria x ananassa
FAN08G2665 Fragaria x ananassa
FAN13G0575 Fragaria x ananassa
FAN17G1228 Fragaria x ananassa
FAN18G0112 Fragaria x ananassa
FAN18G2043 Fragaria x ananassa
FAN19G1626 Fragaria x ananassa
FAN23G0204 Fragaria x ananassa
FAN23G0766 Fragaria x ananassa
FAN26G1190 Fragaria x ananassa
FAN28G0238 Fragaria x ananassa
FAN28G1203 Fragaria x ananassa
FAN28G1270 Fragaria x ananassa
FvH4_1g20950 Fragaria vesca
FvH4_5g37630 Fragaria vesca
Glyma.04G103000 Glycine max
Glyma.05G178800 Glycine max
Glyma.06G104200 Glycine max
Glyma.08G136300 Glycine max
Glyma.11G240000 Glycine max
Glyma.18G017400 Glycine max
Gohir.1Z049511 Gossypium hirsutum
Gohir.1Z049626 Gossypium hirsutum
Gohir.A01G127300 Gossypium hirsutum
Gohir.A05G227500 Gossypium hirsutum
Gohir.A05G267300 Gossypium hirsutum
Gohir.A06G036400 Gossypium hirsutum
Gohir.A11G052400 Gossypium hirsutum
Gohir.A11G052466 Gossypium hirsutum
Gohir.D01G114800 Gossypium hirsutum
Gohir.D05G230000 Gossypium hirsutum
Gohir.D05G269000 Gossypium hirsutum
Gohir.D06G037200 Gossypium hirsutum
Gohir.D11G055750 Gossypium hirsutum
Gohir.D11G055800 Gossypium hirsutum
Gorai.002G140400 Gossypium raimondii
Gorai.007G061000 Gossypium raimondii
Gorai.009G238100 Gossypium raimondii
Gorai.009G281600 Gossypium raimondii
Gorai.010G042000 Gossypium raimondii
GSVIVG01006498001 Vitis vinifera
GSVIVG01009018001 Vitis vinifera
HanXRQChr05g0147381 Helianthus annuus
HanXRQChr05g0162911 Helianthus annuus
HanXRQChr11g0327751 Helianthus annuus
HanXRQChr13g0405901 Helianthus annuus
HanXRQChr15g0491891 Helianthus annuus
HanXRQChr15g0497091 Helianthus annuus
Haze_22257 Corylus avellana
Hma1.2p1_0047F.1_g027870 Hydrangea macrophylla
Hma1.2p1_0120F.1_g057330 Hydrangea macrophylla
Hma1.2p1_0237F.1_g099380 Hydrangea macrophylla
Hma1.2p1_0412F.1_g147220 Hydrangea macrophylla
HPP92_004287 Vanilla planifolia
HPP92_004290 Vanilla planifolia
HPP92_004291 Vanilla planifolia
HPP92_016349 Vanilla planifolia
Hund13628 Selenicereus undatus
Hund26958 Selenicereus undatus
Lalb_Chr07g0185161 Lupinus albus
Lalb_Chr08g0242011 Lupinus albus
Lalb_Chr12g0203811 Lupinus albus
Lalb_Chr23g0277471 Lupinus albus
Lj1g0026161 Lotus japonicus
Lj4A722G65 Lonicera japonica
Lj4C104T2 Lonicera japonica
Lj4C890T1 Lonicera japonica
Lj4g0027257 Lotus japonicus
Lj6g0009395 Lotus japonicus
Lsat_1_v5_gn_6_102860 Lactuca sativa
Lsat_1_v5_gn_9_41380 Lactuca sativa
Manes.02G153300 Manihot esculenta
Manes.12G135400 Manihot esculenta
Manes.18G068201 Manihot esculenta
Mapoly0005s0021 Marchantia polymorpha
MBI02_g08730_MAGBIO Magnolia biondii
MBI05_g15587_MAGBIO Magnolia biondii
MD01G1029000 Malus domestica
MD08G1181800 Malus domestica
MD15G1324500 Malus domestica
MD15G1367100 Malus domestica
Medtr0276s0040 Medicago truncatula
Medtr3g036400 Medicago truncatula
Medtr3g074260 Medicago truncatula
Medtr3g087250 Medicago truncatula
Medtr7g008860 Medicago truncatula
MELO3C007758.2 Cucumis melo
MELO3C011358.2 Cucumis melo
Migut.C00096 Erythranthe guttata
Migut.L00119 Erythranthe guttata
Migut.N02902 Erythranthe guttata
MSTRG.1014 Avicennia marina
MSTRG.24462 Avicennia marina
MSTRG.2566 Avicennia marina
MSTRG.3781 Avicennia marina
Nitab4.5_0000004g0350 Nicotiana tabacum
Nitab4.5_0000104g0080 Nicotiana tabacum
Nitab4.5_0000715g0040 Nicotiana tabacum
Nitab4.5_0000897g0050 Nicotiana tabacum
Nitab4.5_0003629g0040 Nicotiana tabacum
Nitab4.5_0003629g0060 Nicotiana tabacum
Nitab4.5_0005052g0010 Nicotiana tabacum
Nitab4.5_0006967g0010 Nicotiana tabacum
Nitab4.5_0022431g0010 Nicotiana tabacum
Nn1g05336 Nelumbo nucifera
Nn5g30134 Nelumbo nucifera
Oeu001783.2 Olea europaea
Oeu012916.1 Olea europaea
Os02g0574600 Oryza sativa ssp. japonica
Os03g0387800 Oryza sativa ssp. japonica
Os04g0455600 Oryza sativa ssp. japonica
Os07g0623600 Oryza sativa ssp. japonica
Peaxi162Scf00041g00131 Petunia axillaris
Peaxi162Scf00212g00715 Petunia axillaris
Peaxi162Scf00295g01017 Petunia axillaris
Peaxi162Scf00611g00017 Petunia axillaris
PGR044G2248 Punica granatum
PGSC0003DMG400001888 Solanum tuberosum
PGSC0003DMG400017722 Solanum tuberosum
PGSC0003DMG400021797 Solanum tuberosum
PGSC0003DMG400021825 Solanum tuberosum
Phvul.001G252000 Phaseolus vulgaris
Phvul.002G255600 Phaseolus vulgaris
Phvul.009G030300 Phaseolus vulgaris
Potri.002G095300 Populus trichocarpa
Potri.005G076000 Populus trichocarpa
Potri.005G165500 Populus trichocarpa
Potri.007G092400 Populus trichocarpa
Pp3c19_11100 Physcomitrium patens
Pp3c19_11106 Physcomitrium patens
Pp3c22_21710 Physcomitrium patens
Pp3c27_690 Physcomitrium patens
Pp3c3_10090 Physcomitrium patens
Prupe.1G515000 Prunus persica
Prupe.6G186300 Prunus persica
Psat5g089960 Pisum sativum
Psat5g137760 Pisum sativum
Psat7g055000 Pisum sativum
PSO210G7677 Papaver somniferum
PSO447G0165 Papaver somniferum
PSO541G2469 Papaver somniferum
PSO781G0221 Papaver somniferum
QL06p049564 Quercus lobata
QL12p036573 Quercus lobata
RcHm_v2.0_Chr2g0114441 Rosa chinensis
RcHm_v2.0_Chr7g0239311 Rosa chinensis
Rhsim07G0201800 Rhododendron simsii
Rhsim10G0162700 Rhododendron simsii
Sabra02G0075300 Salix brachista
Sabra05G0062600 Salix brachista
Sabra05G0124800 Salix brachista
Sabra07G0076500 Salix brachista
SalBow3G0699 Salvia bowleyana
SalBow7G1764 Salvia bowleyana
Sc01g0000360 Simmondsia chinensis
Sc03g0002110 Simmondsia chinensis
Sc19g0004850 Simmondsia chinensis
Sc23g0000180 Simmondsia chinensis
Sed0002356 Sechium edule
Sed0016150 Sechium edule
Sed0017833 Sechium edule
Sed0019796 Sechium edule
SEGI_22611 Sequoiadendron giganteum
SEGI_41513 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31521 Striga asiatica
SGA_v2.0_scaffold28G11921 Striga asiatica
SGA_v2.0_scaffold84G26525 Striga asiatica
SMO171G0046 Selaginella moellendorffii
SMO196G0194 Selaginella moellendorffii
SMO197G0033 Selaginella moellendorffii
SMO274G0067 Selaginella moellendorffii
Solyc03g078610.3 Solanum lycopersicum
Solyc04g055160.3 Solanum lycopersicum
Solyc04g073970.4 Solanum lycopersicum
Solyc05g051970.4 Solanum lycopersicum
Sopen03g021510 Solanum pennellii
Sopen04g025020 Solanum pennellii
Sopen04g029180 Solanum pennellii
Sopen05g030520 Solanum pennellii
Sp1g30470 Schrenkiella parvula
Sp4g01320 Schrenkiella parvula
Sp5g33270 Schrenkiella parvula
Sp7g36030 Schrenkiella parvula
TAR381G0033 Trochodendron aralioides
TAR625G0380 Trochodendron aralioides
TAR628G0691 Trochodendron aralioides
THA.LOC104813120 Tarenaya hassleriana
THA.LOC104816812 Tarenaya hassleriana
THA.LOC104824874 Tarenaya hassleriana
Thecc.01G102300 Theobroma cacao
Thecc.08G108300 Theobroma cacao
Thhalv10000268m.g Eutrema salsugineum
Thhalv10001828m.g Eutrema salsugineum
Thhalv10018982m.g Eutrema salsugineum
Thhalv10024527m.g Eutrema salsugineum
TPR.G17840 Trifolium pratense
TPR.G22760 Trifolium pratense
TPR.G6249 Trifolium pratense
TWI36G0687 Tripterygium wilfordii
TWI56G0641 Tripterygium wilfordii
TWI74G0256 Tripterygium wilfordii
unitig_32.g11123 Utricularia gibba
unitig_578.g16556 Utricularia gibba
unitig_736.g22567 Utricularia gibba
unitig_899.g14525 Utricularia gibba
vmacro04750 Vaccinium macrocarpon
vmacro12954 Vaccinium macrocarpon
VMungo0251G3079 Vigna mungo
VMungo1309G0214 Vigna mungo
VMungo1383G3193 Vigna mungo
Zm00001eb018830 Zea mays
Zm00001eb018840 Zea mays
Zm00001eb081110 Zea mays
Zm00001eb109710 Zea mays
Zm00001eb327880 Zea mays
Zm00001eb392390 Zea mays
Zm00001eb423880 Zea mays

User provided reference genes

Program Settings