Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p19600 Brassica napus
A04p31220 Brassica napus
A05p01910 Brassica napus
A07p17860 Brassica napus
A07p22950 Brassica napus
A09p49400 Brassica napus
Aa31LG10G11350 Aethionema arabicum
Aa31LG3G1280 Aethionema arabicum
Aa31LG5G9020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3817 Anthoceros agrestis
Actinidia06984 Actinidia chinensis
Actinidia17966 Actinidia chinensis
Actinidia24473 Actinidia chinensis
Actinidia25425 Actinidia chinensis
Actinidia37873 Actinidia chinensis
Ah.04g150750 Amaranthus hybridus
Ah.04g159590 Amaranthus hybridus
Ah.04g159600 Amaranthus hybridus
Ah.06g194860 Amaranthus hybridus
Ah.13g077150 Amaranthus hybridus
AL4G19960 Arabidopsis lyrata
AL4G38770 Arabidopsis lyrata
AL5G37810 Arabidopsis lyrata
Aqoxy2G00502 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.10LG66 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.19PDHV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I6T9ZP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L4E7PU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L6NVF8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X7GI04 Arachis hypogaea
AT2G26770 Arabidopsis thaliana
AT2G40820 Arabidopsis thaliana
AT3G56480 Arabidopsis thaliana
ATR0307G092 Amborella trichopoda
Atru.chr1.1389 Acer truncatum
Atru.chr3.2841 Acer truncatum
AUR62000225 Chenopodium quinoa
AUR62006571 Chenopodium quinoa
AUR62018379 Chenopodium quinoa
AUR62030283 Chenopodium quinoa
BcaB02g07650 Brassica carinata
BcaB06g28048 Brassica carinata
BcaB06g29179 Brassica carinata
BcaB07g33029 Brassica carinata
BcaC02g10839 Brassica carinata
BcaC02g12735 Brassica carinata
BcaC02g12736 Brassica carinata
BcaC02g12881 Brassica carinata
BcaC07g39960 Brassica carinata
BcaC08g44786 Brassica carinata
BolC4t21872H Brassica oleracea
BolC4t23964H Brassica oleracea
BolC4t23965H Brassica oleracea
BolC4t27059H Brassica oleracea
BolC4t28364H Brassica oleracea
BolC6t37529H Brassica oleracea
BolC8t50798H Brassica oleracea
BraA04t17553Z Brassica rapa
BraA04t18578Z Brassica rapa
BraA05t19189Z Brassica rapa
BraA07t29505Z Brassica rapa
BraA07t29960Z Brassica rapa
BraA09t40393Z Brassica rapa
C04p02250 Brassica napus
C04p24600 Brassica napus
C04p68590 Brassica napus
C06p23570 Brassica napus
C08p31770 Brassica napus
CAN.G96.6 Capsicum annuum
CAN.G96.7 Capsicum annuum
CAN.G960.69 Capsicum annuum
CANSAT54G1086 Cannabis sativa
CANSAT64G1613 Cannabis sativa
CARHR118930 Cardamine hirsuta
CARHR118940 Cardamine hirsuta
CARHR135940 Cardamine hirsuta
CARHR166600 Cardamine hirsuta
Carub.0004s0718 Capsella rubella
Carub.0004s2314 Capsella rubella
Carub.0005s2205 Capsella rubella
Carub.0005s2325 Capsella rubella
Ca_03694_v3 Cicer arietinum L.
Ca_03899_v3 Cicer arietinum L.
Ca_06181_v3 Cicer arietinum L.
Ca_08372_v3 Cicer arietinum L.
Ca_21524_v3 Cicer arietinum L.
Ca_28077_v3 Cicer arietinum L.
CBR_g19820 Chara braunii
CBR_g49567 Chara braunii
CBR_g70724 Chara braunii
Cc01_g06670 Coffea canephora
Cc06_g20050 Coffea canephora
CDE04G1028 Ceratophyllum demersum
Ciclev10011580m.g Citrus clementina
Ciclev10015010m.g Citrus clementina
CiPaw.09G049900 Carya illinoinensis
CiPaw.13G147700 Carya illinoinensis
CiPaw.14G110100 Carya illinoinensis
ClCG03G014260 Citrullus lanatus
ClCG04G005760 Citrullus lanatus
COL.COLO4_06630 Corchorus olitorius
COL.COLO4_19403 Corchorus olitorius
COL.COLO4_27455 Corchorus olitorius
COL.COLO4_27766 Corchorus olitorius
Cpa.g.sc34.193 Carica papaya
Cpa.g.sc92.74 Carica papaya
CsaV3_1G041970 Cucumis sativus L.
CsaV3_4G029360 Cucumis sativus L.
CSS0008053 Camellia sinensis var. sinensis
CSS0013797 Camellia sinensis var. sinensis
CSS0031102 Camellia sinensis var. sinensis
CSS0039146 Camellia sinensis var. sinensis
CSS0041228 Camellia sinensis var. sinensis
DCAR_013653 Daucus carota
DCAR_021634 Daucus carota
DCAR_031620 Daucus carota
Dinv13384 Davidia involucrata
Dinv21487 Davidia involucrata
Dinv29319 Davidia involucrata
Dinv29326 Davidia involucrata
Duzib106G0881 Durio zibethinus
Duzib128G1465 Durio zibethinus
Duzib150G0802 Durio zibethinus
Duzib168G0969 Durio zibethinus
Duzib170G0436 Durio zibethinus
ECA233G0380 Erigeron canadensis
ECA233G3805 Erigeron canadensis
ECA238G2298 Erigeron canadensis
ECA248G0501 Erigeron canadensis
EL10Ac3g07270 Beta vulgaris
EL10Ac4g10080 Beta vulgaris
Eucgr.B03757 Eucalyptus grandis
Eucgr.J00669 Eucalyptus grandis
Eucgr.K01667 Eucalyptus grandis
FAN11G3029 Fragaria x ananassa
FAN12G0837 Fragaria x ananassa
FAN16G1168 Fragaria x ananassa
FAN16G2120 Fragaria x ananassa
FAN17G0719 Fragaria x ananassa
FAN21G1735 Fragaria x ananassa
FAN22G0687 Fragaria x ananassa
FvH4_3g27660 Fragaria vesca
FvH4_4g00550 Fragaria vesca
Glyma.02G277400 Glycine max
Glyma.02G296100 Glycine max
Glyma.03G124100 Glycine max
Glyma.03G124300 Glycine max
Glyma.04G017100 Glycine max
Glyma.13G120100 Glycine max
Glyma.14G037200 Glycine max
Glyma.18G106000 Glycine max
Glyma.19G127400 Glycine max
Glyma.20G044200 Glycine max
Gohir.A05G072700 Gossypium hirsutum
Gohir.A09G108800 Gossypium hirsutum
Gohir.A11G306200 Gossypium hirsutum
Gohir.A13G220100 Gossypium hirsutum
Gohir.D05G075600 Gossypium hirsutum
Gohir.D08G091050 Gossypium hirsutum
Gohir.D09G104900 Gossypium hirsutum
Gohir.D11G321600 Gossypium hirsutum
Gohir.D13G224100 Gossypium hirsutum
Gorai.006G122700 Gossypium raimondii
Gorai.007G351800 Gossypium raimondii
Gorai.009G077000 Gossypium raimondii
Gorai.013G254900 Gossypium raimondii
GSVIVG01025779001 Vitis vinifera
GSVIVG01037402001 Vitis vinifera
HanXRQChr01g0007921 Helianthus annuus
HanXRQChr06g0181581 Helianthus annuus
HanXRQChr10g0295531 Helianthus annuus
HanXRQChr13g0406631 Helianthus annuus
HanXRQChr15g0469121 Helianthus annuus
Haze_20258 Corylus avellana
Haze_23277 Corylus avellana
Hma1.2p1_0444F.1_g154080 Hydrangea macrophylla
Hma1.2p1_0811F.1_g222110 Hydrangea macrophylla
HPP92_011288 Vanilla planifolia
HPP92_011311 Vanilla planifolia
HPP92_011887 Vanilla planifolia
HPP92_011893 Vanilla planifolia
HPP92_013795 Vanilla planifolia
Hund07412 Selenicereus undatus
Hund19078 Selenicereus undatus
Hund21958 Selenicereus undatus
Hund24555 Selenicereus undatus
Lalb_Chr10g0106091 Lupinus albus
Lalb_Chr14g0365631 Lupinus albus
Lalb_Chr15g0080161 Lupinus albus
Lj1A290G41 Lonicera japonica
Lj1C297G10 Lonicera japonica
Lj1g0016957 Lotus japonicus
Lj2A812T12 Lonicera japonica
Lj2A821G9 Lonicera japonica
Lj2C404G2 Lonicera japonica
Lj2C406G2 Lonicera japonica
Lj6g0013688 Lotus japonicus
LjContig00564g0012359 Lotus japonicus
Lsat_1_v5_gn_2_32180 Lactuca sativa
Lsat_1_v5_gn_5_70841 Lactuca sativa
Lsat_1_v5_gn_7_62181 Lactuca sativa
Manes.02G136000 Manihot esculenta
Manes.05G200300 Manihot esculenta
Manes.08G061800 Manihot esculenta
Manes.09G002700 Manihot esculenta
Mapoly0044s0037 Marchantia polymorpha
MBI13_g07375_MAGBIO Magnolia biondii
MBI19_g18421_MAGBIO Magnolia biondii
MD03G1156800 Malus domestica
MD12G1093800 Malus domestica
Medtr3g045180 Medicago truncatula
Medtr5g088860 Medicago truncatula
Medtr6g079040 Medicago truncatula
Medtr7g089090 Medicago truncatula
MELO3C015612.2 Cucumis melo
MELO3C019113.2 Cucumis melo
Migut.D00684 Erythranthe guttata
Migut.J01629 Erythranthe guttata
Migut.N02386 Erythranthe guttata
MSTRG.21336 Avicennia marina
MSTRG.26169 Avicennia marina
Nitab4.5_0000155g0220 Nicotiana tabacum
Nitab4.5_0000492g0160 Nicotiana tabacum
Nitab4.5_0002026g0110 Nicotiana tabacum
Nitab4.5_0002869g0040 Nicotiana tabacum
Nn7g36924 Nelumbo nucifera
Oeu017126.1 Olea europaea
Oeu022984.1 Olea europaea
Oeu025920.2 Olea europaea
Oeu044246.1 Olea europaea
Oeu061690.1 Olea europaea
Os01g0805700 Oryza sativa ssp. japonica
Os03g0364500 Oryza sativa ssp. japonica
Os07g0642800 Oryza sativa ssp. japonica
Peaxi162Scf00003g05121 Petunia axillaris
Peaxi162Scf00029g02412 Petunia axillaris
PGR102G3237 Punica granatum
PGR119G2089 Punica granatum
PGR142G2010 Punica granatum
PGSC0003DMG400007170 Solanum tuberosum
Phvul.001G119900 Phaseolus vulgaris
Phvul.006G016800 Phaseolus vulgaris
Phvul.008G203500 Phaseolus vulgaris
Potri.001G272300 Populus trichocarpa
Potri.006G035300 Populus trichocarpa
Potri.009G066800 Populus trichocarpa
Potri.016G033100 Populus trichocarpa
Pp3c16_2310 Physcomitrium patens
Pp3c22_20050 Physcomitrium patens
Pp3c22_20080 Physcomitrium patens
Pp3c22_21400 Physcomitrium patens
Pp3c25_7770 Physcomitrium patens
Pp3c6_17900 Physcomitrium patens
Prupe.4G270000 Prunus persica
Prupe.7G027900 Prunus persica
Psat0s3412g0040 Pisum sativum
Psat2g021360 Pisum sativum
Psat3g080960 Pisum sativum
PSO339G4162 Papaver somniferum
PSO339G4472 Papaver somniferum
PSO384G3306 Papaver somniferum
QL01p016274 Quercus lobata
QL07p012486 Quercus lobata
RcHm_v2.0_Chr4g0386001 Rosa chinensis
RcHm_v2.0_Chr5g0050171 Rosa chinensis
Rhsim13G0204100 Rhododendron simsii
RhsimUnG0018400 Rhododendron simsii
RhsimUnG0209700 Rhododendron simsii
Sabra06G0023600 Salix brachista
Sabra09G0049700 Salix brachista
Sabra16G0036200 Salix brachista
Sabra16G0167600 Salix brachista
SalBow6G2481 Salvia bowleyana
SalBow6G3616 Salvia bowleyana
Sc16g0010890 Simmondsia chinensis
Sc19g0008060 Simmondsia chinensis
Sed0002720 Sechium edule
Sed0004917 Sechium edule
Sed0004925 Sechium edule
Sed0012010 Sechium edule
SEGI_37178 Sequoiadendron giganteum
SGA_v2.0_scaffold26G11391 Striga asiatica
SGA_v2.0_scaffold32G13081 Striga asiatica
SGA_v2.0_scaffold3G01434 Striga asiatica
SGA_v2.0_scaffold66G22281 Striga asiatica
SGA_v2.0_scaffold69G23170 Striga asiatica
SHI24933 Sapria himalayana
SHI24936 Sapria himalayana
SHI24945 Sapria himalayana
SHI24949 Sapria himalayana
SMO199G0067 Selaginella moellendorffii
SMO203G0093 Selaginella moellendorffii
Solyc05g017830.3 Solanum lycopersicum
Solyc07g040700.3 Solanum lycopersicum
Solyc10g078340.2 Solanum lycopersicum
Solyc11g062370.1 Solanum lycopersicum
Solyc11g062390.3 Solanum lycopersicum
Sopen10g029000 Solanum pennellii
Sopen11g024380 Solanum pennellii
Sp4g08730 Schrenkiella parvula
Sp4g23150 Schrenkiella parvula
Sp5g06090 Schrenkiella parvula
TAR150G0001 Trochodendron aralioides
TAR386G0002 Trochodendron aralioides
TAR636G1245 Trochodendron aralioides
THA.LOC104800467 Tarenaya hassleriana
THA.LOC104803222 Tarenaya hassleriana
THA.LOC104824371 Tarenaya hassleriana
THA.LOC104826463 Tarenaya hassleriana
Thecc.05G122200 Theobroma cacao
Thecc.09G253200 Theobroma cacao
Thhalv10005916m.g Eutrema salsugineum
Thhalv10016526m.g Eutrema salsugineum
Thhalv10022499m.g Eutrema salsugineum
TPR.G16409 Trifolium pratense
TPR.G24722 Trifolium pratense
TWI31G0888 Tripterygium wilfordii
TWI53G1407 Tripterygium wilfordii
TWI74G0392 Tripterygium wilfordii
TWI75G1710 Tripterygium wilfordii
TWI77G0449 Tripterygium wilfordii
unitig_21.g20683 Utricularia gibba
unitig_22.g5689 Utricularia gibba
unitig_37.g12780 Utricularia gibba
unitig_744.g24173 Utricularia gibba
unitig_8.g3654 Utricularia gibba
unitig_8.g3655 Utricularia gibba
vmacro04076 Vaccinium macrocarpon
vmacro04077 Vaccinium macrocarpon
vmacro04078 Vaccinium macrocarpon
vmacro07769 Vaccinium macrocarpon
VMungo0540G1010 Vigna mungo
VMungo0647G0773 Vigna mungo
VMungo1383G2231 Vigna mungo
Zm00001eb017810 Zea mays
Zm00001eb150210 Zea mays
Zm00001eb150440 Zea mays
Zm00001eb272340 Zea mays
Zm00001eb329080 Zea mays
Zm00001eb341450 Zea mays
Zm00001eb346990 Zea mays
Zm00001eb369330 Zea mays
Zm00001eb394270 Zea mays

User provided reference genes

Program Settings