Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p00790 Brassica napus
A06p12920 Brassica napus
Aa31LG7G1860 Aethionema arabicum
Aa31LG9G12030 Aethionema arabicum
Actinidia21347 Actinidia chinensis
Ah.11g045900 Amaranthus hybridus
Ah.12g059830 Amaranthus hybridus
AL1G29190 Arabidopsis lyrata
AL4G46500 Arabidopsis lyrata
AL6G43660 Arabidopsis lyrata
Aqoxy1G01992 Aquilegia oxysepala
Aqoxy5G02809 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6ZGG0N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7M6195 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.873UVH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BNV3MQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E23C16 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M8PIUR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MKLC0K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WGJX0L Arachis hypogaea
AT1G17030 Arabidopsis thaliana
AT2G47010 Arabidopsis thaliana
AT4G09965 Arabidopsis thaliana
ATR0568G091 Amborella trichopoda
ATR0796G146 Amborella trichopoda
ATR1136G128 Amborella trichopoda
ATR1145G046 Amborella trichopoda
Atru.chr10.1531 Acer truncatum
Atru.chr10.1532 Acer truncatum
Atru.chr10.1539 Acer truncatum
Atru.chr13.2317 Acer truncatum
Atru.chr5.878 Acer truncatum
AUR62011694 Chenopodium quinoa
AUR62022376 Chenopodium quinoa
AUR62024553 Chenopodium quinoa
AUR62034321 Chenopodium quinoa
AUR62039489 Chenopodium quinoa
AUR62041811 Chenopodium quinoa
BcaB02g06655 Brassica carinata
BcaC02g12828 Brassica carinata
BolC4t21733H Brassica oleracea
BolC5t30241H Brassica oleracea
BraA05t19082Z Brassica rapa
BraA06t24452Z Brassica rapa
C04p00950 Brassica napus
C05p15350 Brassica napus
CAN.G100.54 Capsicum annuum
CAN.G1569.2 Capsicum annuum
CAN.G375.57 Capsicum annuum
CANSAT25G0275 Cannabis sativa
CANSAT25G3290 Cannabis sativa
CANSAT64G1388 Cannabis sativa
CARHR017560 Cardamine hirsuta
CARHR142380 Cardamine hirsuta
Carub.0001s1675 Capsella rubella
Carub.0004s2975 Capsella rubella
Ca_10243_v3 Cicer arietinum L.
Ca_27007_v3 Cicer arietinum L.
Cc02_g15730 Coffea canephora
Cc05_g10590 Coffea canephora
Cc05_g10600 Coffea canephora
Cc10_g11960 Coffea canephora
Cc10_g16480 Coffea canephora
CDE02G1128 Ceratophyllum demersum
CDE02G4499 Ceratophyllum demersum
CDE08G0596 Ceratophyllum demersum
CDE08G1144 Ceratophyllum demersum
Cfa004896 Carpinus fangiana
Cfa008119 Carpinus fangiana
Ciclev10014740m.g Citrus clementina
Ciclev10019664m.g Citrus clementina
Ciclev10019888m.g Citrus clementina
Ciclev10024307m.g Citrus clementina
CiPaw.03G017800 Carya illinoinensis
CiPaw.07G124700 Carya illinoinensis
CiPaw.09G136700 Carya illinoinensis
CiPaw.10G103500 Carya illinoinensis
ClCG08G000430 Citrullus lanatus
COL.COLO4_12110 Corchorus olitorius
COL.COLO4_23140 Corchorus olitorius
COL.COLO4_31218 Corchorus olitorius
Cpa.g.sc21.49 Carica papaya
Cpa.g.sc41.91 Carica papaya
Cpa.g.sc57.5 Carica papaya
Cpa.g.sc812.1 Carica papaya
Cpa.g.sc812.2 Carica papaya
Cpa.g.sc9.307 Carica papaya
CsaV3_5G040350 Cucumis sativus L.
CSS0012953 Camellia sinensis var. sinensis
CSS0018667 Camellia sinensis var. sinensis
CSS0020979 Camellia sinensis var. sinensis
CSS0022773 Camellia sinensis var. sinensis
CSS0030025 Camellia sinensis var. sinensis
CSS0032588 Camellia sinensis var. sinensis
CSS0043433 Camellia sinensis var. sinensis
CSS0044351 Camellia sinensis var. sinensis
DCAR_002933 Daucus carota
DCAR_021042 Daucus carota
Dinv04154 Davidia involucrata
Dinv12087 Davidia involucrata
Dinv26699 Davidia involucrata
Dinv32329 Davidia involucrata
Duzib133G1047 Durio zibethinus
Duzib138G1212 Durio zibethinus
Duzib213G0910 Durio zibethinus
Duzib235G1252 Durio zibethinus
Duzib264G1126 Durio zibethinus
ECA247G1029 Erigeron canadensis
EL10Ac1g01654 Beta vulgaris
EL10Ac8g19990 Beta vulgaris
EL10As5g23618 Beta vulgaris
Eucgr.A01013 Eucalyptus grandis
Eucgr.D00432 Eucalyptus grandis
Eucgr.F01373 Eucalyptus grandis
Eucgr.F04071 Eucalyptus grandis
Eucgr.K00576 Eucalyptus grandis
FAN04G1037 Fragaria x ananassa
FAN08G2914 Fragaria x ananassa
FAN11G0502 Fragaria x ananassa
FAN13G0337 Fragaria x ananassa
FAN16G2403 Fragaria x ananassa
FAN18G2682 Fragaria x ananassa
FAN19G1954 Fragaria x ananassa
FAN25G3377 Fragaria x ananassa
FAN26G2781 Fragaria x ananassa
FAN28G0214 Fragaria x ananassa
FvH4_1g26330 Fragaria vesca
FvH4_3g07190 Fragaria vesca
FvH4_3g07210 Fragaria vesca
FvH4_5g32760 Fragaria vesca
Glyma.02G008100 Glycine max
Glyma.04G053500 Glycine max
Glyma.10G137400 Glycine max
Gohir.A12G001800 Gossypium hirsutum
Gohir.A12G120350 Gossypium hirsutum
Gohir.A12G120400 Gossypium hirsutum
Gohir.D12G001600 Gossypium hirsutum
Gohir.D12G124200 Gossypium hirsutum
Gohir.D12G124300 Gossypium hirsutum
Gorai.008G001000 Gossypium raimondii
Gorai.008G135300 Gossypium raimondii
Gorai.N014000 Gossypium raimondii
Gorai.N014100 Gossypium raimondii
GSVIVG01021266001 Vitis vinifera
GSVIVG01025919001 Vitis vinifera
GSVIVG01028260001 Vitis vinifera
HanXRQChr15g0464411 Helianthus annuus
Haze_05134 Corylus avellana
Haze_05371 Corylus avellana
Haze_05373 Corylus avellana
Haze_05375 Corylus avellana
Haze_13911 Corylus avellana
Hma1.2p1_0519F.1_g171360 Hydrangea macrophylla
Hma1.2p1_0579F.1_g182620 Hydrangea macrophylla
HPP92_003917 Vanilla planifolia
Hund00925 Selenicereus undatus
Hund17536 Selenicereus undatus
Lalb_Chr06g0172841 Lupinus albus
Lj1C822G14 Lonicera japonica
Lj1C9T4 Lonicera japonica
Lj5g0018975 Lotus japonicus
Lsat_1_v5_gn_9_6900 Lactuca sativa
Manes.02G193200 Manihot esculenta
Manes.05G009600 Manihot esculenta
Manes.15G099700 Manihot esculenta
Manes.15G099800 Manihot esculenta
Manes.17G060400 Manihot esculenta
Mapoly0011s0186 Marchantia polymorpha
MBI06_g06687_MAGBIO Magnolia biondii
MBI18_g10384_MAGBIO Magnolia biondii
MD00G1008000 Malus domestica
MD09G1289400 Malus domestica
MD15G1400500 Malus domestica
MD17G1284100 Malus domestica
Medtr1g086170 Medicago truncatula
Medtr2g072850 Medicago truncatula
Medtr2g072880 Medicago truncatula
MELO3C022207.2 Cucumis melo
Migut.C01338 Erythranthe guttata
Migut.J01321 Erythranthe guttata
Migut.M01004 Erythranthe guttata
MSTRG.14256 Avicennia marina
MSTRG.15095 Avicennia marina
MSTRG.25485 Avicennia marina
Nitab4.5_0000222g0350 Nicotiana tabacum
Nitab4.5_0000748g0060 Nicotiana tabacum
Nitab4.5_0000748g0080 Nicotiana tabacum
Nitab4.5_0000927g0030 Nicotiana tabacum
Nitab4.5_0001140g0100 Nicotiana tabacum
Nitab4.5_0001778g0040 Nicotiana tabacum
Nitab4.5_0002458g0080 Nicotiana tabacum
Nitab4.5_0003618g0030 Nicotiana tabacum
Nitab4.5_0005428g0020 Nicotiana tabacum
Nitab4.5_0008128g0030 Nicotiana tabacum
Nitab4.5_0008976g0030 Nicotiana tabacum
Nitab4.5_0009310g0050 Nicotiana tabacum
Nn1g00797 Nelumbo nucifera
Nn1g00798 Nelumbo nucifera
Nn1g00800 Nelumbo nucifera
Nn1g00801 Nelumbo nucifera
Nn1g00802 Nelumbo nucifera
Nn1g00804 Nelumbo nucifera
Nn3g20931 Nelumbo nucifera
Nn3g21101 Nelumbo nucifera
Nn3g21929 Nelumbo nucifera
Nn6g34371 Nelumbo nucifera
Nn7g36648 Nelumbo nucifera
Nn7g37008 Nelumbo nucifera
Nn7g38099 Nelumbo nucifera
Nn7g38109 Nelumbo nucifera
Nn7g38110 Nelumbo nucifera
Nn7g38111 Nelumbo nucifera
Nn7g38112 Nelumbo nucifera
Nn7g38198 Nelumbo nucifera
Nn7g38199 Nelumbo nucifera
Nn7g38217 Nelumbo nucifera
Nn7g38281 Nelumbo nucifera
Nn7g38283 Nelumbo nucifera
Oeu001070.1 Olea europaea
Oeu002568.1 Olea europaea
Oeu006544.2 Olea europaea
Oeu006604.1 Olea europaea
Oeu020553.1 Olea europaea
Oeu058447.1 Olea europaea
Oeu058450.1 Olea europaea
Os05g0272200 Oryza sativa ssp. japonica
Os05g0272800 Oryza sativa ssp. japonica
Peaxi162Scf00111g10126 Petunia axillaris
Peaxi162Scf00112g00919 Petunia axillaris
Peaxi162Scf00573g00618 Petunia axillaris
Peaxi162Scf00688g00224 Petunia axillaris
Peaxi162Scf00750g00058 Petunia axillaris
Peaxi162Scf00750g00067 Petunia axillaris
Peaxi162Scf00919g00005 Petunia axillaris
Peaxi162Scf01009g00225 Petunia axillaris
Peaxi162Scf01240g00006 Petunia axillaris
PGR031G2652 Punica granatum
PGR042G1868 Punica granatum
PGR142G3872 Punica granatum
PGSC0003DMG400007085 Solanum tuberosum
PGSC0003DMG400012063 Solanum tuberosum
PGSC0003DMG400027813 Solanum tuberosum
PGSC0003DMG400028415 Solanum tuberosum
PGSC0003DMG401005194 Solanum tuberosum
Phvul.007G209900 Phaseolus vulgaris
Potri.001G381400 Populus trichocarpa
Potri.001G381600 Populus trichocarpa
Potri.001G382000 Populus trichocarpa
Potri.002G187700 Populus trichocarpa
Potri.004G062000 Populus trichocarpa
Potri.019G076900 Populus trichocarpa
Pp3c18_15900 Physcomitrium patens
Prupe.1G548100 Prunus persica
Prupe.3G003300 Prunus persica
Prupe.4G067900 Prunus persica
Psat6g159080 Pisum sativum
PSO761G0033 Papaver somniferum
QL05p050205 Quercus lobata
QL08p024587 Quercus lobata
QL08p024589 Quercus lobata
QL09p004441 Quercus lobata
QL09p004456 Quercus lobata
QL09p021467 Quercus lobata
QL12p034545 Quercus lobata
RcHm_v2.0_Chr3g0486001 Rosa chinensis
RcHm_v2.0_Chr5g0011941 Rosa chinensis
RcHm_v2.0_Chr7g0230431 Rosa chinensis
RcHm_v2.0_Chr7g0230451 Rosa chinensis
Rhsim01G0000100 Rhododendron simsii
Rhsim05G0169500 Rhododendron simsii
Rhsim06G0212500 Rhododendron simsii
Rhsim08G0220300 Rhododendron simsii
Rhsim13G0187100 Rhododendron simsii
Sabra02G0130000 Salix brachista
Sabra04G0041100 Salix brachista
Sabra16G0251500 Salix brachista
SalBow2G1293 Salvia bowleyana
SalBow7G0904 Salvia bowleyana
SalBow7G1049 Salvia bowleyana
SalBow7G2250 Salvia bowleyana
SalBow7G2292 Salvia bowleyana
SalBow7G3760 Salvia bowleyana
Sc02g0003390 Simmondsia chinensis
Sc05g0000080 Simmondsia chinensis
Sc05g0008080 Simmondsia chinensis
Sc05g0008090 Simmondsia chinensis
Sc05g0009970 Simmondsia chinensis
Sc05g0009980 Simmondsia chinensis
Sed0011171 Sechium edule
Sed0014840 Sechium edule
SEGI_33072 Sequoiadendron giganteum
SEGI_33994 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29668 Striga asiatica
SGA_v2.0_scaffold114G31987 Striga asiatica
SGA_v2.0_scaffold118G32575 Striga asiatica
SGA_v2.0_scaffold123G33476 Striga asiatica
SGA_v2.0_scaffold131G34427 Striga asiatica
SGA_v2.0_scaffold172G39025 Striga asiatica
SMO146G0084 Selaginella moellendorffii
Solyc01g068130.4 Solanum lycopersicum
Solyc02g072040.3 Solanum lycopersicum
Solyc02g072050.2 Solanum lycopersicum
Solyc03g006010.3 Solanum lycopersicum
Solyc07g062090.3 Solanum lycopersicum
Solyc11g032090.3 Solanum lycopersicum
Sopen01g030070 Solanum pennellii
Sopen02g021010 Solanum pennellii
Sopen02g021020 Solanum pennellii
Sopen03g002010 Solanum pennellii
Sopen07g030350 Solanum pennellii
Sopen11g014760 Solanum pennellii
Sp1g15150 Schrenkiella parvula
Sp4g29010 Schrenkiella parvula
Sp6g07520 Schrenkiella parvula
TAR362G1329 Trochodendron aralioides
TAR365G0703 Trochodendron aralioides
TAR381G1014 Trochodendron aralioides
TAR623G1251 Trochodendron aralioides
TAR624G0254 Trochodendron aralioides
TAR626G0111 Trochodendron aralioides
TAR627G1141 Trochodendron aralioides
TAR633G1285 Trochodendron aralioides
TAR636G0392 Trochodendron aralioides
TAR636G2233 Trochodendron aralioides
THA.LOC104815929 Tarenaya hassleriana
THA.LOC104817434 Tarenaya hassleriana
Thecc.01G141500 Theobroma cacao
Thecc.01G324100 Theobroma cacao
Thecc.06G164300 Theobroma cacao
Thhalv10001420m.g Eutrema salsugineum
Thhalv10007403m.g Eutrema salsugineum
TPR.G27298 Trifolium pratense
TPR.G3032 Trifolium pratense
TPR.G40493 Trifolium pratense
TWI09G0314 Tripterygium wilfordii
TWI14G0027 Tripterygium wilfordii
TWI14G1296 Tripterygium wilfordii
TWI23G0336 Tripterygium wilfordii
unitig_26.g9861 Utricularia gibba
vmacro02362 Vaccinium macrocarpon
vmacro03999 Vaccinium macrocarpon
vmacro11977 Vaccinium macrocarpon
VMungo0720G1343 Vigna mungo
Zm00001eb064640 Zea mays

User provided reference genes

Program Settings