Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p02100 Brassica napus
A03p36760 Brassica napus
A04p03480 Brassica napus
A05p38450 Brassica napus
Aa31LG10G11490 Aethionema arabicum
Aa31LG10G11500 Aethionema arabicum
Aa31LG11G5920 Aethionema arabicum
Aa31LG3G3700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5025 Anthoceros agrestis
Actinidia06700 Actinidia chinensis
Actinidia17701 Actinidia chinensis
Actinidia18591 Actinidia chinensis
Actinidia38189 Actinidia chinensis
Ah.04g150720 Amaranthus hybridus
Ah.06g187720 Amaranthus hybridus
AL3G22270 Arabidopsis lyrata
AL469U10010 Arabidopsis lyrata
AL4G38930 Arabidopsis lyrata
AL5G38050 Arabidopsis lyrata
AL6G14910 Arabidopsis lyrata
Aqoxy1G00073 Aquilegia oxysepala
Aqoxy2G01221 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1Z1ZPG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AMJ10Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BQN7PY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LP3YY4 Arachis hypogaea
AT2G40960 Arabidopsis thaliana
AT3G10770 Arabidopsis thaliana
AT3G56680 Arabidopsis thaliana
AT5G05100 Arabidopsis thaliana
ATR0307G034 Amborella trichopoda
ATR0820G142 Amborella trichopoda
Atru.chr1.1392 Acer truncatum
Atru.chr12.1005 Acer truncatum
AUR62018384 Chenopodium quinoa
AUR62030279 Chenopodium quinoa
AUR62034502 Chenopodium quinoa
AUR62037672 Chenopodium quinoa
BcaB02g08356 Brassica carinata
BcaB02g10102 Brassica carinata
BcaB02g10104 Brassica carinata
BcaB02g10105 Brassica carinata
BcaB04g17269 Brassica carinata
BcaB04g18608 Brassica carinata
BcaB04g21178 Brassica carinata
BcaC01g04159 Brassica carinata
BcaC02g09861 Brassica carinata
BcaC05g29434 Brassica carinata
BolC1t05356H Brassica oleracea
BolC3t12796H Brassica oleracea
BolC3t16712H Brassica oleracea
BolC4t25218H Brassica oleracea
BraA01t04223Z Brassica rapa
BraA03t09578Z Brassica rapa
BraA03t12836Z Brassica rapa
BraA04t16089Z Brassica rapa
BraA05t22635Z Brassica rapa
BraA09t40405Z Brassica rapa
C03p02450 Brassica napus
C03p44450 Brassica napus
C04p35820 Brassica napus
C05p57350 Brassica napus
CAN.G251.5 Capsicum annuum
CAN.G31.1 Capsicum annuum
CAN.G730.31 Capsicum annuum
CAN.G960.74 Capsicum annuum
CANSAT56G1274 Cannabis sativa
CANSAT56G1512 Cannabis sativa
CARHR085340 Cardamine hirsuta
CARHR136070 Cardamine hirsuta
CARHR166800 Cardamine hirsuta
CARHR208170 Cardamine hirsuta
Carub.0003s1000 Capsella rubella
Carub.0004s2328 Capsella rubella
Carub.0005s2342 Capsella rubella
Carub.0006s0403 Capsella rubella
Ca_08368_v3 Cicer arietinum L.
Ca_10509_v3 Cicer arietinum L.
Ca_10510_v3 Cicer arietinum L.
CBR_g20977 Chara braunii
Cc02_g09820 Coffea canephora
Cc06_g20170 Coffea canephora
CDE02G0531 Ceratophyllum demersum
CDE06G0117 Ceratophyllum demersum
CDE06G1341 Ceratophyllum demersum
CDE08G0472 Ceratophyllum demersum
CDE08G1395 Ceratophyllum demersum
Cfa011264 Carpinus fangiana
Cfa019973 Carpinus fangiana
Ciclev10012047m.g Citrus clementina
Ciclev10031477m.g Citrus clementina
CiPaw.09G050500 Carya illinoinensis
CiPaw.10G042800 Carya illinoinensis
CiPaw.13G038500 Carya illinoinensis
CiPaw.14G032700 Carya illinoinensis
ClCG04G005800 Citrullus lanatus
ClCG05G021740 Citrullus lanatus
ClCG10G016450 Citrullus lanatus
Cpa.g.sc183.7 Carica papaya
Cpa.g.sc92.69 Carica papaya
Cre01.g068742 Chlamydomonas reinhardtii
CsaV3_3G039890 Cucumis sativus L.
CsaV3_4G029320 Cucumis sativus L.
CsaV3_5G035530 Cucumis sativus L.
CsaV3_7G016140 Cucumis sativus L.
CSS0000065 Camellia sinensis var. sinensis
CSS0009075 Camellia sinensis var. sinensis
CSS0015252 Camellia sinensis var. sinensis
CSS0016854 Camellia sinensis var. sinensis
CSS0018263 Camellia sinensis var. sinensis
CSS0034138 Camellia sinensis var. sinensis
CSS0036230 Camellia sinensis var. sinensis
DCAR_006342 Daucus carota
DCAR_006343 Daucus carota
DCAR_009124 Daucus carota
DCAR_013656 Daucus carota
DCAR_018570 Daucus carota
DCAR_020595 Daucus carota
DCAR_024899 Daucus carota
Dinv02031 Davidia involucrata
Dinv09597 Davidia involucrata
Dinv11851 Davidia involucrata
Dinv20766 Davidia involucrata
Dinv36123 Davidia involucrata
Duzib093G0697 Durio zibethinus
Duzib106G0363 Durio zibethinus
Duzib128G0410 Durio zibethinus
Duzib128G1994 Durio zibethinus
ECA238G2260 Erigeron canadensis
ECA248G3331 Erigeron canadensis
EL10Ac2g03787 Beta vulgaris
EL10Ac3g07275 Beta vulgaris
EL10Ac4g08640 Beta vulgaris
EL10Ac7g17528 Beta vulgaris
Eucgr.A02200 Eucalyptus grandis
Eucgr.G02696 Eucalyptus grandis
FAN01G0582 Fragaria x ananassa
FAN01G1784 Fragaria x ananassa
FAN03G1021 Fragaria x ananassa
FAN06G0939 Fragaria x ananassa
FAN06G4547 Fragaria x ananassa
FAN09G1659 Fragaria x ananassa
FAN10G0070 Fragaria x ananassa
FAN10G0628 Fragaria x ananassa
FvH4_7g05730 Fragaria vesca
Glyma.02G162500 Glycine max
Glyma.03G123300 Glycine max
Glyma.10G102000 Glycine max
Glyma.10G203800 Glycine max
Glyma.19G126900 Glycine max
Glyma.20G186800 Glycine max
Gohir.A10G198000 Gossypium hirsutum
Gohir.A11G306000 Gossypium hirsutum
Gohir.D10G205100 Gossypium hirsutum
Gohir.D11G321400 Gossypium hirsutum
Gorai.007G351600 Gossypium raimondii
Gorai.011G230000 Gossypium raimondii
GSVIVG01011273001 Vitis vinifera
GSVIVG01025786001 Vitis vinifera
HanXRQChr01g0007961 Helianthus annuus
HanXRQChr05g0146921 Helianthus annuus
HanXRQChr07g0194241 Helianthus annuus
HanXRQChr11g0321281 Helianthus annuus
HanXRQChr11g0342221 Helianthus annuus
HanXRQChr13g0406851 Helianthus annuus
Haze_02514 Corylus avellana
Haze_20264 Corylus avellana
HPP92_000048 Vanilla planifolia
HPP92_000049 Vanilla planifolia
HPP92_005466 Vanilla planifolia
Hund19076 Selenicereus undatus
Hund22299 Selenicereus undatus
Hund24552 Selenicereus undatus
Lalb_Chr02g0151711 Lupinus albus
Lalb_Chr06g0170211 Lupinus albus
Lalb_Chr14g0365591 Lupinus albus
Lalb_Chr21g0313311 Lupinus albus
Lalb_Chr22g0357791 Lupinus albus
Lalb_Chr24g0400511 Lupinus albus
Lj1g0012069 Lotus japonicus
Lj2A405T42 Lonicera japonica
Lj2A407T41 Lonicera japonica
Lj2A408G50 Lonicera japonica
Lj2C31G15 Lonicera japonica
Lj3C928T15 Lonicera japonica
Lj4C86T20 Lonicera japonica
Lj5g0016568 Lotus japonicus
Lj5g0019607 Lotus japonicus
Lsat_1_v5_gn_0_7560 Lactuca sativa
Lsat_1_v5_gn_2_104661 Lactuca sativa
Lsat_1_v5_gn_7_62341 Lactuca sativa
Manes.07G087800 Manihot esculenta
Manes.08G062350 Manihot esculenta
Manes.08G062500 Manihot esculenta
Manes.08G062600 Manihot esculenta
Manes.10G058300 Manihot esculenta
Mapoly0029s0081 Marchantia polymorpha
MBI13_g04202_MAGBIO Magnolia biondii
MBI16_g34349_MAGBIO Magnolia biondii
MBI19_g04332_MAGBIO Magnolia biondii
MCO12G045 Micromonas commoda
MD02G1255700 Malus domestica
MD07G1065700 Malus domestica
MD12G1092100 Malus domestica
MD12G1092300 Malus domestica
Medtr1g092900 Medicago truncatula
Medtr1g092910 Medicago truncatula
Medtr7g088990 Medicago truncatula
MELO3C007927.2 Cucumis melo
MELO3C009731.2 Cucumis melo
MELO3C012355.2 Cucumis melo
MELO3C019120.2 Cucumis melo
Migut.F00906 Erythranthe guttata
Migut.J01625 Erythranthe guttata
Migut.K00151 Erythranthe guttata
MSTRG.10782 Avicennia marina
MSTRG.27533 Avicennia marina
MSTRG.4793 Avicennia marina
MSTRG.9088 Avicennia marina
Nitab4.5_0000123g0510 Nicotiana tabacum
Nitab4.5_0001437g0130 Nicotiana tabacum
Nitab4.5_0003774g0060 Nicotiana tabacum
Nitab4.5_0011086g0010 Nicotiana tabacum
Nn2g14117 Nelumbo nucifera
Nn2g14697 Nelumbo nucifera
Nn6g34943 Nelumbo nucifera
Nn7g36943 Nelumbo nucifera
Oeu005225.1 Olea europaea
Oeu005226.1 Olea europaea
Oeu025593.4 Olea europaea
Oeu026576.1 Olea europaea
Oeu030829.1 Olea europaea
Oeu044568.1 Olea europaea
Oeu057806.1 Olea europaea
Os05g0411600 Oryza sativa ssp. japonica
Os09g0568000 Oryza sativa ssp. japonica
Peaxi162Scf00003g05232 Petunia axillaris
Peaxi162Scf00173g00611 Petunia axillaris
PGR042G3691 Punica granatum
PGR044G0874 Punica granatum
PGSC0003DMG400007195 Solanum tuberosum
PGSC0003DMG400015071 Solanum tuberosum
PGSC0003DMG400019487 Solanum tuberosum
PGSC0003DMG400034982 Solanum tuberosum
Phvul.001G119400 Phaseolus vulgaris
Phvul.007G103200 Phaseolus vulgaris
Phvul.007G244200 Phaseolus vulgaris
Potri.006G034700 Populus trichocarpa
Potri.008G021900 Populus trichocarpa
Potri.010G237500 Populus trichocarpa
Potri.016G032500 Populus trichocarpa
Pp3c15_1650 Physcomitrium patens
Pp3c9_1350 Physcomitrium patens
Prupe.2G079700 Prunus persica
Prupe.7G027300 Prunus persica
Psat0s5452g0040 Pisum sativum
Psat3g081240 Pisum sativum
Psat6g177680 Pisum sativum
Psat6g177720 Pisum sativum
Psat6g177840 Pisum sativum
PSO339G5608 Papaver somniferum
PSO339G6610 Papaver somniferum
PSO384G1900 Papaver somniferum
PSO384G4327 Papaver somniferum
QL04p044842 Quercus lobata
QL07p012655 Quercus lobata
RcHm_v2.0_Chr1g0332761 Rosa chinensis
Rhsim03G0099800 Rhododendron simsii
Rhsim04G0114600 Rhododendron simsii
Rhsim09G0142800 Rhododendron simsii
RhsimUnG0018600 Rhododendron simsii
RhsimUnG0209500 Rhododendron simsii
Sabra06G0023200 Salix brachista
Sabra08G0014800 Salix brachista
Sabra10G0185900 Salix brachista
Sabra16G0035800 Salix brachista
SalBow6G1394 Salvia bowleyana
Sc09g0005470 Simmondsia chinensis
Sc13g0000940 Simmondsia chinensis
Sc19g0008000 Simmondsia chinensis
Sed0000725 Sechium edule
Sed0004942 Sechium edule
Sed0006449 Sechium edule
Sed0011962 Sechium edule
SEGI_01706 Sequoiadendron giganteum
SEGI_39051 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30538 Striga asiatica
SGA_v2.0_scaffold13G06486 Striga asiatica
SGA_v2.0_scaffold16G07825 Striga asiatica
SGA_v2.0_scaffold240G44140 Striga asiatica
SGA_v2.0_scaffold62G21344 Striga asiatica
SGA_v2.0_scaffold66G22289 Striga asiatica
SHI21302 Sapria himalayana
SMO133G0003 Selaginella moellendorffii
Solyc10g078300.2 Solanum lycopersicum
Solyc11g007110.2 Solanum lycopersicum
Sopen10g028960 Solanum pennellii
Sopen11g003030 Solanum pennellii
Sp3g09100 Schrenkiella parvula
Sp4g23280 Schrenkiella parvula
Sp5g05890 Schrenkiella parvula
Sp6g37730 Schrenkiella parvula
TAR369G0256 Trochodendron aralioides
TAR369G0706 Trochodendron aralioides
TAR622G1166 Trochodendron aralioides
TAR623G0712 Trochodendron aralioides
TAR633G0842 Trochodendron aralioides
TAR633G2250 Trochodendron aralioides
TAR636G1819 Trochodendron aralioides
TAR636G2010 Trochodendron aralioides
THA.LOC104801230 Tarenaya hassleriana
THA.LOC104803234 Tarenaya hassleriana
THA.LOC104816496 Tarenaya hassleriana
THA.LOC104823164 Tarenaya hassleriana
THA.LOC104825357 Tarenaya hassleriana
THA.LOC104826881 Tarenaya hassleriana
Thecc.05G123100 Theobroma cacao
Thecc.10G107100 Theobroma cacao
Thhalv10006048m.g Eutrema salsugineum
Thhalv10014404m.g Eutrema salsugineum
Thhalv10021089m.g Eutrema salsugineum
TPR.G18683 Trifolium pratense
TPR.G18688 Trifolium pratense
TPR.G22676 Trifolium pratense
TWI15G0670 Tripterygium wilfordii
TWI38G1487 Tripterygium wilfordii
TWI53G2084 Tripterygium wilfordii
TWI63G1270 Tripterygium wilfordii
TWI74G0504 Tripterygium wilfordii
unitig_37.g12345 Utricularia gibba
unitig_46.g18635 Utricularia gibba
unitig_736.g22284 Utricularia gibba
unitig_899.g15090 Utricularia gibba
vmacro08993 Vaccinium macrocarpon
vmacro10299 Vaccinium macrocarpon
vmacro10301 Vaccinium macrocarpon
VMungo0720G1116 Vigna mungo
VMungo0720G2122 Vigna mungo
VMungo1383G2070 Vigna mungo
Zm00001eb075830 Zea mays
Zm00001eb095980 Zea mays
Zm00001eb140310 Zea mays
Zm00001eb217940 Zea mays
Zm00001eb288070 Zea mays
Zm00001eb308340 Zea mays
Zm00001eb349480 Zea mays

User provided reference genes

Program Settings