Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p38020 Brassica napus
A03p39710 Brassica napus
A03p49690 Brassica napus
A03p49700 Brassica napus
A05p19090 Brassica napus
A05p33400 Brassica napus
A06p01920 Brassica napus
A08p02200 Brassica napus
Aa31LG8G3230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1196 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.4028 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.566 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3289 Anthoceros agrestis
Actinidia08986 Actinidia chinensis
Actinidia15725 Actinidia chinensis
Actinidia21672 Actinidia chinensis
Actinidia24747 Actinidia chinensis
Actinidia32740 Actinidia chinensis
Ah.01g021470 Amaranthus hybridus
Ah.16g105120 Amaranthus hybridus
AL1G27340 Arabidopsis lyrata
AL1G60460 Arabidopsis lyrata
AL3G28730 Arabidopsis lyrata
Aqoxy7G01655 Aquilegia oxysepala
Aqoxy7G03855 Aquilegia oxysepala
Aqoxy7G03857 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.27T0RV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.32X8AD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7B3I6Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.82TWMI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8HF3SK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DIR85G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J6DT1H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M1ZRRT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MDC40M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4FZWU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X84LJS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZU3IH0 Arachis hypogaea
AT1G15250 Arabidopsis thaliana
AT1G52300 Arabidopsis thaliana
AT3G16080 Arabidopsis thaliana
ATR0315G156 Amborella trichopoda
ATR0787G172 Amborella trichopoda
Atru.chr1.3314 Acer truncatum
Atru.chr7.2169 Acer truncatum
AUR62011632 Chenopodium quinoa
AUR62016463 Chenopodium quinoa
AUR62023027 Chenopodium quinoa
AUR62025327 Chenopodium quinoa
AUR62028336 Chenopodium quinoa
AUR62043357 Chenopodium quinoa
BcaB02g11012 Brassica carinata
BcaB04g17159 Brassica carinata
BcaB04g18883 Brassica carinata
BcaB06g25702 Brassica carinata
BcaC01g01319 Brassica carinata
BcaC01g03836 Brassica carinata
BcaC02g08571 Brassica carinata
BcaC05g28913 Brassica carinata
BcaC06g36587 Brassica carinata
BcaC08g43383 Brassica carinata
BcaC08g43984 Brassica carinata
BolC1t04786H Brassica oleracea
BolC3t17092H Brassica oleracea
BolC3t21379H Brassica oleracea
BolC6t35839H Brassica oleracea
BolC6t36568H Brassica oleracea
BolC7t40660H Brassica oleracea
BolC9t55990H Brassica oleracea
BraA02t08794Z Brassica rapa
BraA03t13121Z Brassica rapa
BraA03t14068Z Brassica rapa
BraA05t20811Z Brassica rapa
BraA05t22165Z Brassica rapa
BraA06t23408Z Brassica rapa
BraA08t32267Z Brassica rapa
BraA09t38227Z Brassica rapa
C03p48120 Brassica napus
C03p90560 Brassica napus
C05p50400 Brassica napus
C06p07500 Brassica napus
C06p13870 Brassica napus
C07p02620 Brassica napus
CAN.G1078.1 Capsicum annuum
CANSAT56G1546 Cannabis sativa
CARHR015780 Cardamine hirsuta
CARHR042410 Cardamine hirsuta
CARHR091240 Cardamine hirsuta
CARHR153590 Cardamine hirsuta
Carub.0001s1501 Capsella rubella
Carub.0001s4126 Capsella rubella
Carub.0003s1581 Capsella rubella
Ca_01123_v3 Cicer arietinum L.
Ca_20379_v3 Cicer arietinum L.
CBR_g31253 Chara braunii
CBR_g78845 Chara braunii
Cc04_g03180 Coffea canephora
Cc08_g08940 Coffea canephora
CDE02G1431 Ceratophyllum demersum
Ciclev10010027m.g Citrus clementina
Ciclev10010353m.g Citrus clementina
Ciclev10026841m.g Citrus clementina
Ciclev10033291m.g Citrus clementina
CiPaw.01G237500 Carya illinoinensis
CiPaw.02G150000 Carya illinoinensis
CiPaw.08G023200 Carya illinoinensis
ClCG07G013110 Citrullus lanatus
ClCG09G002030 Citrullus lanatus
COL.COLO4_18702 Corchorus olitorius
COL.COLO4_30401 Corchorus olitorius
Cpa.g.sc78.85 Carica papaya
Cpa.g.sc78.86 Carica papaya
Cpa.g.sc98.18 Carica papaya
Cre10.g430400 Chlamydomonas reinhardtii
CsaV3_7G033310 Cucumis sativus L.
CSS0008243 Camellia sinensis var. sinensis
CSS0015253 Camellia sinensis var. sinensis
CSS0023057 Camellia sinensis var. sinensis
CSS0025472 Camellia sinensis var. sinensis
CSS0028854 Camellia sinensis var. sinensis
CSS0029434 Camellia sinensis var. sinensis
CSS0035262 Camellia sinensis var. sinensis
DCAR_003055 Daucus carota
DCAR_011251 Daucus carota
DCAR_015062 Daucus carota
Dinv14222 Davidia involucrata
Dinv30251 Davidia involucrata
Dinv34671 Davidia involucrata
Dinv38034 Davidia involucrata
Duzib160G0742 Durio zibethinus
Duzib168G1862 Durio zibethinus
Duzib187G1620 Durio zibethinus
Duzib192G0719 Durio zibethinus
Duzib235G0811 Durio zibethinus
ECA233G2270 Erigeron canadensis
ECA234G1009 Erigeron canadensis
ECA248G1625 Erigeron canadensis
EL10Ac2g04083 Beta vulgaris
EL10Ac2g04084 Beta vulgaris
Eucgr.F03027 Eucalyptus grandis
Eucgr.J02975 Eucalyptus grandis
FAN02G4591 Fragaria x ananassa
FAN05G2990 Fragaria x ananassa
FAN09G4495 Fragaria x ananassa
FAN14G0739 Fragaria x ananassa
FAN15G1738 Fragaria x ananassa
FAN20G0195 Fragaria x ananassa
FAN27G0374 Fragaria x ananassa
FvH4_2g36210 Fragaria vesca
FvH4_6g31490 Fragaria vesca
Glyma.07G004900 Glycine max
Glyma.08G205500 Glycine max
Glyma.13G357900 Glycine max
Glyma.15G015500 Glycine max
Gohir.A02G086800 Gossypium hirsutum
Gohir.A05G048500 Gossypium hirsutum
Gohir.A05G131100 Gossypium hirsutum
Gohir.A06G095100 Gossypium hirsutum
Gohir.A07G024000 Gossypium hirsutum
Gohir.A07G034712 Gossypium hirsutum
Gohir.A08G109800 Gossypium hirsutum
Gohir.A09G086830 Gossypium hirsutum
Gohir.A10G080800 Gossypium hirsutum
Gohir.D03G061000 Gossypium hirsutum
Gohir.D05G050400 Gossypium hirsutum
Gohir.D05G130400 Gossypium hirsutum
Gohir.D06G095100 Gossypium hirsutum
Gohir.D07G027600 Gossypium hirsutum
Gohir.D08G078150 Gossypium hirsutum
Gohir.D10G066800 Gossypium hirsutum
Gohir.D10G070600 Gossypium hirsutum
Gohir.D11G162450 Gossypium hirsutum
Gohir.D11G213800 Gossypium hirsutum
Gorai.001G028800 Gossypium raimondii
Gorai.001G138500 Gossypium raimondii
Gorai.002G060000 Gossypium raimondii
Gorai.004G083100 Gossypium raimondii
Gorai.007G172900 Gossypium raimondii
Gorai.009G051900 Gossypium raimondii
Gorai.009G134200 Gossypium raimondii
Gorai.010G109500 Gossypium raimondii
Gorai.011G071000 Gossypium raimondii
Gorai.011G074900 Gossypium raimondii
GSVIVG01017081001 Vitis vinifera
GSVIVG01035677001 Vitis vinifera
HanXRQChr01g0029561 Helianthus annuus
HanXRQChr02g0048041 Helianthus annuus
HanXRQChr14g0435181 Helianthus annuus
HanXRQChr14g0456091 Helianthus annuus
Haze_27682 Corylus avellana
Hma1.2p1_0659F.1_g197260 Hydrangea macrophylla
Hma1.2p1_1434F.1_g283090 Hydrangea macrophylla
Hma1.2p1_2022F.1_g311332 Hydrangea macrophylla
Hma1.2p1_2022F.1_g311333 Hydrangea macrophylla
Hma1.2p1_2022F.1_g311335 Hydrangea macrophylla
Hma1.2p1_2022F.1_g311337 Hydrangea macrophylla
HPP92_012833 Vanilla planifolia
Hund03442 Selenicereus undatus
Hund19550 Selenicereus undatus
Lalb_Chr04g0262781 Lupinus albus
Lalb_Chr14g0373321 Lupinus albus
Lalb_Chr22g0351321 Lupinus albus
Lalb_Chr24g0395891 Lupinus albus
Lalb_Chr25g0279921 Lupinus albus
Lj3g0001018 Lotus japonicus
Lj3g0004564 Lotus japonicus
Lsat_1_v5_gn_1_49881 Lactuca sativa
Lsat_1_v5_gn_4_102021 Lactuca sativa
Lsat_1_v5_gn_5_130440 Lactuca sativa
Lsat_1_v5_gn_6_11121 Lactuca sativa
Manes.03G066501 Manihot esculenta
Manes.04G125200 Manihot esculenta
Manes.11G044400 Manihot esculenta
Manes.16G066400 Manihot esculenta
Mapoly0026s0131 Marchantia polymorpha
Mapoly0029s0031 Marchantia polymorpha
MBI01_g06517_MAGBIO Magnolia biondii
MBI03_g22421_MAGBIO Magnolia biondii
MBI04_g22010_MAGBIO Magnolia biondii
MBI07_g00624_MAGBIO Magnolia biondii
MBI07_g46073_MAGBIO Magnolia biondii
MBI15_g15096_MAGBIO Magnolia biondii
MBI15_g40293_MAGBIO Magnolia biondii
MCO11G364 Micromonas commoda
MD08G1119100 Malus domestica
MD09G1210700 Malus domestica
MD15G1098400 Malus domestica
MD15G1184400 Malus domestica
MD17G1193600 Malus domestica
Medtr0147s0070 Medicago truncatula
Medtr2g101900 Medicago truncatula
MELO3C024244.2 Cucumis melo
MELO3C030793.2 Cucumis melo
Migut.D01022 Erythranthe guttata
Migut.I00954 Erythranthe guttata
MSTRG.11066 Avicennia marina
Nitab4.5_0000052g0040 Nicotiana tabacum
Nitab4.5_0000351g0130 Nicotiana tabacum
Nitab4.5_0000664g0330 Nicotiana tabacum
Nitab4.5_0001315g0250 Nicotiana tabacum
Nitab4.5_0001567g0010 Nicotiana tabacum
Nitab4.5_0003338g0010 Nicotiana tabacum
Nitab4.5_0003351g0060 Nicotiana tabacum
Nitab4.5_0007758g0090 Nicotiana tabacum
Nn1g02961 Nelumbo nucifera
Nn2g11735 Nelumbo nucifera
Nn8g39173 Nelumbo nucifera
Oeu027035.1 Olea europaea
Oeu028168.1 Olea europaea
Oeu033503.1 Olea europaea
Oeu063947.1 Olea europaea
Os02g0111700 Oryza sativa ssp. japonica
Os02g0815000 Oryza sativa ssp. japonica
Os08g0128500 Oryza sativa ssp. japonica
Peaxi162Scf00038g00733 Petunia axillaris
Peaxi162Scf00207g00942 Petunia axillaris
Peaxi162Scf00276g00623 Petunia axillaris
Peaxi162Scf00523g00721 Petunia axillaris
PGR102G1823 Punica granatum
PGR102G1854 Punica granatum
PGSC0003DMG400002541 Solanum tuberosum
PGSC0003DMG400016534 Solanum tuberosum
Phvul.001G235900 Phaseolus vulgaris
Phvul.008G077400 Phaseolus vulgaris
Phvul.L003700 Phaseolus vulgaris
Phvul.L003800 Phaseolus vulgaris
Potri.001G183200 Populus trichocarpa
Potri.003G053100 Populus trichocarpa
Potri.006G243300 Populus trichocarpa
Potri.018G036900 Populus trichocarpa
Pp3c15_4370 Physcomitrium patens
Pp3c18_13160 Physcomitrium patens
Pp3c20_2550 Physcomitrium patens
Pp3c21_9910 Physcomitrium patens
Pp3c23_17260 Physcomitrium patens
Pp3c9_8500 Physcomitrium patens
PRCOL_00000118 Prasinoderma coloniale
Prupe.1G453300 Prunus persica
Prupe.3G069000 Prunus persica
Prupe.7G231700 Prunus persica
Psat5g298400 Pisum sativum
Psat7g250960 Pisum sativum
PSO210G1524 Papaver somniferum
PSO210G7575 Papaver somniferum
PSO782G1839 Papaver somniferum
PSO832G2369 Papaver somniferum
QL02p085211 Quercus lobata
QL05p022565 Quercus lobata
QL12p026321 Quercus lobata
RcHm_v2.0_Chr2g0090341 Rosa chinensis
RcHm_v2.0_Chr2g0138351 Rosa chinensis
RcHm_v2.0_Chr3g0483621 Rosa chinensis
RcHm_v2.0_Chr5g0044271 Rosa chinensis
RcHm_v2.0_Chr6g0305681 Rosa chinensis
Rhsim12G0199300 Rhododendron simsii
Sabra01G0144600 Salix brachista
Sabra03G0026400 Salix brachista
Sabra06G0190400 Salix brachista
Sabra18G0037600 Salix brachista
SalBow2G1804 Salvia bowleyana
SalBow2G3487 Salvia bowleyana
Sc09g0009040 Simmondsia chinensis
Sc12g0009370 Simmondsia chinensis
Sed0004004 Sechium edule
Sed0013934 Sechium edule
Sed0021132 Sechium edule
Sed0022752 Sechium edule
SMO356G0442 Selaginella moellendorffii
Solyc03g120780.3 Solanum lycopersicum
Solyc06g066660.4 Solanum lycopersicum
Solyc08g068180.3 Solanum lycopersicum
Solyc10g150121.1 Solanum lycopersicum
Solyc11g040220.2 Solanum lycopersicum
Sopen03g039600 Solanum pennellii
Sopen06g024930 Solanum pennellii
Sp1g38830 Schrenkiella parvula
Sp3g14430 Schrenkiella parvula
TAR362G1234 Trochodendron aralioides
TAR383G0862 Trochodendron aralioides
TAR624G0397 Trochodendron aralioides
TAR626G0943 Trochodendron aralioides
TAR636G3422 Trochodendron aralioides
THA.LOC104800431 Tarenaya hassleriana
THA.LOC104810525 Tarenaya hassleriana
THA.LOC104812522 Tarenaya hassleriana
THA.LOC104813556 Tarenaya hassleriana
THA.LOC104815524 Tarenaya hassleriana
THA.LOC104817987 Tarenaya hassleriana
Thecc.06G090700 Theobroma cacao
Thecc.09G039100 Theobroma cacao
Thhalv10011894m.g Eutrema salsugineum
Thhalv10021833m.g Eutrema salsugineum
TPR.G17664 Trifolium pratense
TPR.G37264 Trifolium pratense
TPR.G38689 Trifolium pratense
TWI12G0208 Tripterygium wilfordii
TWI32G0468 Tripterygium wilfordii
TWI75G0392 Tripterygium wilfordii
unitig_21.g20354 Utricularia gibba
unitig_744.g24444 Utricularia gibba
vmacro16959 Vaccinium macrocarpon
vmacro18897 Vaccinium macrocarpon
VMungo0540G2095 Vigna mungo
VMungo1080G1835 Vigna mungo
Zm00001eb019230 Zea mays
Zm00001eb229690 Zea mays
Zm00001eb281060 Zea mays

User provided reference genes

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