Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p21390 Brassica napus
A04p25640 Brassica napus
A09p04050 Brassica napus
A10p23400 Brassica napus
Aa31LG11G14030 Aethionema arabicum
Aa31LG2G3910 Aethionema arabicum
Aa31LG3G18540 Aethionema arabicum
Aa31LG3G18550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.302 Anthoceros agrestis
Actinidia04836 Actinidia chinensis
Actinidia04837 Actinidia chinensis
Actinidia18131 Actinidia chinensis
Actinidia18132 Actinidia chinensis
Actinidia19001 Actinidia chinensis
Actinidia25783 Actinidia chinensis
Ah.02g113970 Amaranthus hybridus
Ah.10g032120 Amaranthus hybridus
Ah.11g047940 Amaranthus hybridus
AL5G19490 Arabidopsis lyrata
AL5G19520 Arabidopsis lyrata
AL5G19570 Arabidopsis lyrata
AL6G18280 Arabidopsis lyrata
AL6G18310 Arabidopsis lyrata
AL6G18320 Arabidopsis lyrata
Aqoxy3G03613 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.URK1K5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZWJH5S Arachis hypogaea
AT3G29385 Arabidopsis thaliana
AT5G07940 Arabidopsis thaliana
AT5G07970 Arabidopsis thaliana
AT5G07980 Arabidopsis thaliana
ATR0064G022 Amborella trichopoda
Atru.chr8.463 Acer truncatum
Atru.chr9.413 Acer truncatum
AUR62008512 Chenopodium quinoa
AUR62018175 Chenopodium quinoa
AUR62021578 Chenopodium quinoa
AUR62038660 Chenopodium quinoa
BcaB01g05684 Brassica carinata
BcaB01g05685 Brassica carinata
BcaB04g19512 Brassica carinata
BcaB05g21590 Brassica carinata
BcaB05g21591 Brassica carinata
BcaB05g21594 Brassica carinata
BcaC02g07837 Brassica carinata
BcaC03g13202 Brassica carinata
BcaC03g15744 Brassica carinata
BcaC04g18951 Brassica carinata
BcaC04g23840 Brassica carinata
BcaNung06142 Brassica carinata
BolC2t06298H Brassica oleracea
BolC2t09496H Brassica oleracea
BolC9t53358H Brassica oleracea
BolC9t58993H Brassica oleracea
BolC9t59640H Brassica oleracea
BraA02t04937Z Brassica rapa
BraA02t07156Z Brassica rapa
BraA04t18068Z Brassica rapa
BraA09t36041Z Brassica rapa
BraA10t44408Z Brassica rapa
C02p03360 Brassica napus
C02p34760 Brassica napus
C04p62790 Brassica napus
C09p04260 Brassica napus
C09p61550 Brassica napus
CAN.G4.20 Capsicum annuum
CAN.G479.18 Capsicum annuum
CAN.G587.41 Capsicum annuum
CANSAT64G1619 Cannabis sativa
CANSAT80G0157 Cannabis sativa
CARHR153020 Cardamine hirsuta
CARHR205210 Cardamine hirsuta
CARHR205220 Cardamine hirsuta
CARHR205250 Cardamine hirsuta
Carub.0005s0812 Capsella rubella
Carub.0006s0683 Capsella rubella
Ca_21784_v3 Cicer arietinum L.
Ca_26551_v3 Cicer arietinum L.
Cc04_g13200 Coffea canephora
Cc07_g04150 Coffea canephora
CDE02G2315 Ceratophyllum demersum
CDE05G1445 Ceratophyllum demersum
CDE05G3237 Ceratophyllum demersum
CDE07G0239 Ceratophyllum demersum
Cfa007658 Carpinus fangiana
Cfa019314 Carpinus fangiana
Ciclev10010896m.g Citrus clementina
Ciclev10018461m.g Citrus clementina
CiPaw.03G089000 Carya illinoinensis
CiPaw.04G056400 Carya illinoinensis
CiPaw.11G051700 Carya illinoinensis
CiPaw.12G007900 Carya illinoinensis
ClCG04G011900 Citrullus lanatus
ClCG11G004780 Citrullus lanatus
COL.COLO4_07020 Corchorus olitorius
COL.COLO4_37591 Corchorus olitorius
Cpa.g.c44561 Carica papaya
Cpa.g.sc656.1 Carica papaya
Cpa.g.sc94.26 Carica papaya
CsaV3_1G005880 Cucumis sativus L.
CsaV3_5G038500 Cucumis sativus L.
CSS0001605 Camellia sinensis var. sinensis
CSS0004205 Camellia sinensis var. sinensis
CSS0010377 Camellia sinensis var. sinensis
CSS0038743 Camellia sinensis var. sinensis
DCAR_010148 Daucus carota
DCAR_014034 Daucus carota
DCAR_025426 Daucus carota
DCAR_025427 Daucus carota
Dinv10522 Davidia involucrata
Dinv10523 Davidia involucrata
Dinv17397 Davidia involucrata
Dinv17398 Davidia involucrata
Dinv17399 Davidia involucrata
Dinv33824 Davidia involucrata
Dinv34947 Davidia involucrata
Dinv34948 Davidia involucrata
Dinv34949 Davidia involucrata
Duzib068G1120 Durio zibethinus
Duzib084G0585 Durio zibethinus
Duzib147G1389 Durio zibethinus
Duzib187G1380 Durio zibethinus
Duzib205G0371 Durio zibethinus
Duzib264G0454 Durio zibethinus
ECA232G1477 Erigeron canadensis
ECA246G4021 Erigeron canadensis
ECA247G0186 Erigeron canadensis
EL10Ac5g11114 Beta vulgaris
EL10As6g23676 Beta vulgaris
Eucgr.K02518 Eucalyptus grandis
Eucgr.K02519 Eucalyptus grandis
FAN02G0287 Fragaria x ananassa
FAN05G1408 Fragaria x ananassa
FAN08G3261 Fragaria x ananassa
FAN09G4295 Fragaria x ananassa
FAN13G2812 Fragaria x ananassa
FAN14G4295 Fragaria x ananassa
FAN18G3960 Fragaria x ananassa
FvH4_5g14040 Fragaria vesca
FvH4_6g46950 Fragaria vesca
Glyma.04G163600 Glycine max
Glyma.05G022300 Glycine max
Glyma.06G202000 Glycine max
Glyma.16G016500 Glycine max
Glyma.17G077400 Glycine max
Gohir.A03G069500 Gossypium hirsutum
Gohir.A03G085001 Gossypium hirsutum
Gohir.A05G349000 Gossypium hirsutum
Gohir.A09G243300 Gossypium hirsutum
Gohir.A11G033200 Gossypium hirsutum
Gohir.A11G033500 Gossypium hirsutum
Gohir.A12G181800 Gossypium hirsutum
Gohir.D03G096000 Gossypium hirsutum
Gohir.D05G105300 Gossypium hirsutum
Gohir.D09G244000 Gossypium hirsutum
Gohir.D11G036500 Gossypium hirsutum
Gohir.D11G036900 Gossypium hirsutum
Gohir.D12G184600 Gossypium hirsutum
Gorai.003G100700 Gossypium raimondii
Gorai.006G268000 Gossypium raimondii
Gorai.007G039300 Gossypium raimondii
Gorai.007G039700 Gossypium raimondii
Gorai.008G198000 Gossypium raimondii
GSVIVG01007885001 Vitis vinifera
GSVIVG01032923001 Vitis vinifera
HanXRQChr05g0152701 Helianthus annuus
HanXRQChr05g0157261 Helianthus annuus
HanXRQChr07g0199821 Helianthus annuus
HanXRQChr14g0432181 Helianthus annuus
HanXRQChr15g0488851 Helianthus annuus
Haze_07702 Corylus avellana
Haze_14436 Corylus avellana
Hma1.2p1_0060F.1_g033210 Hydrangea macrophylla
Hma1.2p1_0127F.1_g059530 Hydrangea macrophylla
Hma1.2p1_0322F.1_g124800 Hydrangea macrophylla
HPP92_019472 Vanilla planifolia
HPP92_019476 Vanilla planifolia
HPP92_019477 Vanilla planifolia
Hund02596 Selenicereus undatus
Hund09881 Selenicereus undatus
Lalb_Chr07g0178281 Lupinus albus
Lalb_Chr12g0197101 Lupinus albus
Lalb_Chr13g0302921 Lupinus albus
Lj1g0009803 Lotus japonicus
Lj4A118T61 Lonicera japonica
Lj4g0026422 Lotus japonicus
Lj5C104T5 Lonicera japonica
Lju41C3G3 Lonicera japonica
Lsat_1_v5_gn_4_172361 Lactuca sativa
Lsat_1_v5_gn_5_23200 Lactuca sativa
Manes.01G095500 Manihot esculenta
Manes.02G054400 Manihot esculenta
Manes.06G085900 Manihot esculenta
Manes.14G084600 Manihot esculenta
MBI19_g15226_MAGBIO Magnolia biondii
MD06G1200700 Malus domestica
MD09G1065800 Malus domestica
MD14G1210400 Malus domestica
MD17G1058500 Malus domestica
Medtr3g024330 Medicago truncatula
Medtr4g109420 Medicago truncatula
MELO3C002018.2 Cucumis melo
MELO3C022032.2 Cucumis melo
Migut.D01693 Erythranthe guttata
Migut.H00632 Erythranthe guttata
Migut.I00326 Erythranthe guttata
MSTRG.15452 Avicennia marina
MSTRG.22980 Avicennia marina
MSTRG.3006 Avicennia marina
MSTRG.4457 Avicennia marina
Nitab4.5_0000361g0020 Nicotiana tabacum
Nitab4.5_0001410g0080 Nicotiana tabacum
Nitab4.5_0001485g0190 Nicotiana tabacum
Nitab4.5_0001688g0110 Nicotiana tabacum
Nitab4.5_0003660g0040 Nicotiana tabacum
Nitab4.5_0011867g0010 Nicotiana tabacum
Nitab4.5_0016107g0010 Nicotiana tabacum
Nn3g17426 Nelumbo nucifera
Nn4g23398 Nelumbo nucifera
Oeu001012.1 Olea europaea
Oeu008254.3 Olea europaea
Oeu010250.1 Olea europaea
Oeu061151.1 Olea europaea
Oeu061152.1 Olea europaea
Oeu062159.1 Olea europaea
Os03g0213300 Oryza sativa ssp. japonica
Os03g0756700 Oryza sativa ssp. japonica
Os10g0316400 Oryza sativa ssp. japonica
Peaxi162Scf00013g00631 Petunia axillaris
Peaxi162Scf00201g00131 Petunia axillaris
Peaxi162Scf00702g00048 Petunia axillaris
Peaxi162Scf00702g00418 Petunia axillaris
PGR004G1141 Punica granatum
PGR044G2115 Punica granatum
Phvul.003G185600 Phaseolus vulgaris
Phvul.009G193100 Phaseolus vulgaris
Potri.012G061400 Populus trichocarpa
Potri.012G066600 Populus trichocarpa
Potri.015G056200 Populus trichocarpa
Potri.015G056400 Populus trichocarpa
Pp3c15_9050 Physcomitrium patens
Pp3c9_21970 Physcomitrium patens
Prupe.3G255600 Prunus persica
Prupe.5G203400 Prunus persica
Psat0s626g0120 Pisum sativum
Psat1g037640 Pisum sativum
Psat1g136440 Pisum sativum
Psat2g053280 Pisum sativum
Psat2g061080 Pisum sativum
Psat2g086440 Pisum sativum
Psat3g153720 Pisum sativum
Psat3g191000 Pisum sativum
Psat3g191080 Pisum sativum
Psat3g207520 Pisum sativum
Psat4g047960 Pisum sativum
Psat5g201960 Pisum sativum
Psat7g039120 Pisum sativum
Psat7g061240 Pisum sativum
Psat7g138680 Pisum sativum
Psat7g146920 Pisum sativum
Psat7g150800 Pisum sativum
Psat7g158280 Pisum sativum
Psat7g158400 Pisum sativum
Psat7g188640 Pisum sativum
PSO013G0087 Papaver somniferum
PSO013G0214 Papaver somniferum
PSO013G0391 Papaver somniferum
PSO017G2493 Papaver somniferum
PSO063G1398 Papaver somniferum
PSO170G5487 Papaver somniferum
PSO339G0148 Papaver somniferum
PSO339G6131 Papaver somniferum
PSO421G0596 Papaver somniferum
PSO478G3010 Papaver somniferum
QL02p067781 Quercus lobata
QL10p019165 Quercus lobata
RcHm_v2.0_Chr2g0165931 Rosa chinensis
RcHm_v2.0_Chr7g0182781 Rosa chinensis
Rhsim08G0147300 Rhododendron simsii
Rhsim10G0043000 Rhododendron simsii
Rhsim12G0151500 Rhododendron simsii
Sabra12G0048500 Salix brachista
Sabra15G0081400 Salix brachista
Sabra15G0081600 Salix brachista
SalBow1G4328 Salvia bowleyana
SalBow1G4748 Salvia bowleyana
SalBow1G8190 Salvia bowleyana
SalBow7G0716 Salvia bowleyana
Sc10g0009740 Simmondsia chinensis
Sed0001778 Sechium edule
Sed0003463 Sechium edule
Sed0005687 Sechium edule
Sed0020614 Sechium edule
SEGI_11867 Sequoiadendron giganteum
SEGI_27809 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31926 Striga asiatica
SGA_v2.0_scaffold148G36465 Striga asiatica
SGA_v2.0_scaffold154G37099 Striga asiatica
SGA_v2.0_scaffold7G04035 Striga asiatica
SHI27023 Sapria himalayana
SHI27024 Sapria himalayana
SMO356G0482 Selaginella moellendorffii
Solyc03g115250.4 Solanum lycopersicum
Solyc03g115280.1 Solanum lycopersicum
Solyc06g069500.3 Solanum lycopersicum
Solyc12g038490.2 Solanum lycopersicum
Sopen03g034290 Solanum pennellii
Sopen06g026790 Solanum pennellii
Sopen12g018730 Solanum pennellii
Sp2g17980 Schrenkiella parvula
Sp6g28540 Schrenkiella parvula
Sp6g34970 Schrenkiella parvula
Sp6g35000 Schrenkiella parvula
Sp6g35010 Schrenkiella parvula
SpUn0847_0010 Schrenkiella parvula
TAR371G0849 Trochodendron aralioides
TAR374G0479 Trochodendron aralioides
TAR622G0180 Trochodendron aralioides
TAR622G0732 Trochodendron aralioides
TAR622G0780 Trochodendron aralioides
TAR629G1115 Trochodendron aralioides
THA.LOC104817119 Tarenaya hassleriana
THA.LOC104818516 Tarenaya hassleriana
THA.LOC104820998 Tarenaya hassleriana
THA.LOC104822898 Tarenaya hassleriana
Thecc.03G099600 Theobroma cacao
Thecc.04G094300 Theobroma cacao
Thhalv10005357m.g Eutrema salsugineum
Thhalv10012434m.g Eutrema salsugineum
Thhalv10012438m.g Eutrema salsugineum
Thhalv10012599m.g Eutrema salsugineum
TPR.G12144 Trifolium pratense
TPR.G2049 Trifolium pratense
TWI32G0075 Tripterygium wilfordii
TWI34G0746 Tripterygium wilfordii
TWI60G1371 Tripterygium wilfordii
unitig_52.g17641 Utricularia gibba
unitig_52.g17642 Utricularia gibba
unitig_62.g23381 Utricularia gibba
vmacro05629 Vaccinium macrocarpon
vmacro16505 Vaccinium macrocarpon
vmacro17598 Vaccinium macrocarpon
VMungo1215G1196 Vigna mungo
VMungo1309G0348 Vigna mungo
Zm00001eb008570 Zea mays
Zm00001eb201600 Zea mays
Zm00001eb214580 Zea mays
Zm00001eb400280 Zea mays

User provided reference genes

Program Settings