Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p02720 Brassica napus
A03p02730 Brassica napus
A03p37250 Brassica napus
A05p37600 Brassica napus
A10p29950 Brassica napus
Aa31LG3G5200 Aethionema arabicum
Aa31LG5G17140 Aethionema arabicum
Aa31LG5G17190 Aethionema arabicum
Aa31sc52G250 Aethionema arabicum
Aa31sc52G260 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1093 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1054 Anthoceros agrestis
Actinidia03864 Actinidia chinensis
Actinidia03972 Actinidia chinensis
Actinidia06190 Actinidia chinensis
Actinidia07949 Actinidia chinensis
Actinidia37766 Actinidia chinensis
Ah.12g054380 Amaranthus hybridus
Ah.12g059450 Amaranthus hybridus
AL3G23280 Arabidopsis lyrata
AL6G16500 Arabidopsis lyrata
AL6G16530 Arabidopsis lyrata
Aqoxy1G00604 Aquilegia oxysepala
Aqoxy1G01947 Aquilegia oxysepala
Aqoxy2G00642 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0N260W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3V0CBS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AF4ETX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AQHB6D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F45T9K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FZJA3R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I9FUI6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JU9MFG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M3JRXW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M9SKFA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N8CTUW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QJ7C3B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ULT5P9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WTCC59 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea
AT3G11720 Arabidopsis thaliana
AT5G06410 Arabidopsis thaliana
AT5G06440 Arabidopsis thaliana
ATR0697G265 Amborella trichopoda
ATR0697G280 Amborella trichopoda
Atru.chr8.1300 Acer truncatum
Atru.chr8.1301 Acer truncatum
Atru.chr8.1302 Acer truncatum
Atru.chr8.1303 Acer truncatum
AUR62030695 Chenopodium quinoa
AUR62030696 Chenopodium quinoa
AUR62036336 Chenopodium quinoa
AUR62036337 Chenopodium quinoa
BcaB01g05992 Brassica carinata
BcaB02g08701 Brassica carinata
BcaB04g18657 Brassica carinata
BcaB06g25587 Brassica carinata
BcaC01g04089 Brassica carinata
BcaC05g29335 Brassica carinata
BcaC06g32374 Brassica carinata
BcaC06g32575 Brassica carinata
BolC3t12860H Brassica oleracea
BolC3t16775H Brassica oleracea
BolC5t34281H Brassica oleracea
BolC9t59781H Brassica oleracea
BolC9t59784H Brassica oleracea
BraA03t09635Z Brassica rapa
BraA03t09636Z Brassica rapa
BraA03t12885Z Brassica rapa
BraA05t22558Z Brassica rapa
BraA10t45034Z Brassica rapa
BraA10t45037Z Brassica rapa
C03p03150 Brassica napus
C03p45110 Brassica napus
C04p10650 Brassica napus
C05p56160 Brassica napus
C09p70360 Brassica napus
CAN.G22.25 Capsicum annuum
CAN.G674.15 Capsicum annuum
CAN.G911.27 Capsicum annuum
CAN.G911.29 Capsicum annuum
CANSAT54G2662 Cannabis sativa
CANSAT64G0653 Cannabis sativa
CANSAT64G1416 Cannabis sativa
CARHR086270 Cardamine hirsuta
CARHR117420 Cardamine hirsuta
CARHR206750 Cardamine hirsuta
CARHR206760 Cardamine hirsuta
CARHR207150 Cardamine hirsuta
Carub.0003s1106 Capsella rubella
Carub.0006s0532 Capsella rubella
Ca_09069_v3 Cicer arietinum L.
Ca_11670_v3 Cicer arietinum L.
CBR_g31284 Chara braunii
CBR_g70174 Chara braunii
Cc01_g02980 Coffea canephora
Cc01_g03030 Coffea canephora
Cc06_g06840 Coffea canephora
Cc06_g06850 Coffea canephora
CDE04G0663 Ceratophyllum demersum
CDE06G1636 Ceratophyllum demersum
Cfa020085 Carpinus fangiana
Ciclev10011250m.g Citrus clementina
Ciclev10012448m.g Citrus clementina
CiPaw.09G022800 Carya illinoinensis
CiPaw.09G022900 Carya illinoinensis
CiPaw.10G019600 Carya illinoinensis
ClCG10G018120 Citrullus lanatus
ClCG10G018130 Citrullus lanatus
COL.COLO4_29517 Corchorus olitorius
COL.COLO4_29518 Corchorus olitorius
Cpa.g.sc104.2 Carica papaya
Cpa.g.sc104.3 Carica papaya
Cre11.g467718 Chlamydomonas reinhardtii
Cre12.g507559 Chlamydomonas reinhardtii
CsaV3_3G038170 Cucumis sativus L.
CsaV3_3G038180 Cucumis sativus L.
CSS0004156 Camellia sinensis var. sinensis
CSS0016780 Camellia sinensis var. sinensis
DCAR_013449 Daucus carota
DCAR_013451 Daucus carota
Dinv11882 Davidia involucrata
Dinv11885 Davidia involucrata
Dinv25069 Davidia involucrata
Duzib093G1618 Durio zibethinus
Duzib128G1367 Durio zibethinus
ECA233G0010 Erigeron canadensis
ECA233G4742 Erigeron canadensis
EL10Ac5g11823 Beta vulgaris
EL10Ac5g11825 Beta vulgaris
Eucgr.A02558 Eucalyptus grandis
Eucgr.A02559 Eucalyptus grandis
FAN02G4586 Fragaria x ananassa
FAN05G0175 Fragaria x ananassa
FAN05G0573 Fragaria x ananassa
FAN05G2088 Fragaria x ananassa
FAN05G2830 Fragaria x ananassa
FAN09G2041 Fragaria x ananassa
FAN09G2968 Fragaria x ananassa
FAN14G1848 Fragaria x ananassa
FAN14G3769 Fragaria x ananassa
FvH4_6g20770 Fragaria vesca
FvH4_6g20780 Fragaria vesca
Glyma.02G193000 Glycine max
Glyma.02G193200 Glycine max
Glyma.03G203900 Glycine max
Glyma.10G083700 Glycine max
Glyma.10G083800 Glycine max
Glyma.19G201300 Glycine max
Gohir.A01G135400 Gossypium hirsutum
Gohir.A01G200100 Gossypium hirsutum
Gohir.A09G132700 Gossypium hirsutum
Gohir.D01G122600 Gossypium hirsutum
Gohir.D01G190200 Gossypium hirsutum
Gohir.D09G129000 Gossypium hirsutum
Gorai.002G153500 Gossypium raimondii
Gorai.002G233900 Gossypium raimondii
Gorai.006G147700 Gossypium raimondii
GSVIVG01022534001 Vitis vinifera
GSVIVG01022555001 Vitis vinifera
HanXRQChr02g0053101 Helianthus annuus
HanXRQChr02g0053331 Helianthus annuus
HanXRQChr05g0138051 Helianthus annuus
HanXRQChr13g0398661 Helianthus annuus
Haze_20107 Corylus avellana
Haze_20108 Corylus avellana
Hma1.2p1_0969F.1_g242598 Hydrangea macrophylla
Hma1.2p1_2851F.1_g329440 Hydrangea macrophylla
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla
HPP92_005860 Vanilla planifolia
HPP92_018252 Vanilla planifolia
Hund10835 Selenicereus undatus
Hund10836 Selenicereus undatus
Lalb_Chr01g0017781 Lupinus albus
Lalb_Chr06g0173221 Lupinus albus
Lalb_Chr20g0111261 Lupinus albus
Lalb_Chr25g0282121 Lupinus albus
Lj1A1058T56 Lonicera japonica
Lj1g0015991 Lotus japonicus
Lj1g0026398 Lotus japonicus
Lj3C241T8 Lonicera japonica
Lj3C241T9 Lonicera japonica
Lj5g0000561 Lotus japonicus
Lj5g0002159 Lotus japonicus
Lsat_1_v5_gn_6_34681 Lactuca sativa
Lsat_1_v5_gn_6_34701 Lactuca sativa
Manes.08G036000 Manihot esculenta
Manes.08G036100 Manihot esculenta
Manes.09G043100 Manihot esculenta
Mapoly0007s0117 Marchantia polymorpha
Mapoly0055s0040 Marchantia polymorpha
MBI05_g37895_MAGBIO Magnolia biondii
MBI11_g01309_MAGBIO Magnolia biondii
MCO10G285 Micromonas commoda
MCO14G004 Micromonas commoda
MD12G1043900 Malus domestica
MD12G1044000 Malus domestica
MD14G1042900 Malus domestica
MD14G1043000 Malus domestica
Medtr1g055300 Medicago truncatula
Medtr1g055315 Medicago truncatula
Medtr7g106640 Medicago truncatula
MELO3C009560.2 Cucumis melo
MELO3C009561.2 Cucumis melo
Migut.J00743 Erythranthe guttata
Migut.J00744 Erythranthe guttata
Migut.L01851 Erythranthe guttata
MSTRG.19331 Avicennia marina
MSTRG.5917 Avicennia marina
Nitab4.5_0000721g0220 Nicotiana tabacum
Nitab4.5_0001918g0040 Nicotiana tabacum
Nitab4.5_0005218g0010 Nicotiana tabacum
Nitab4.5_0005218g0020 Nicotiana tabacum
Nitab4.5_0009788g0020 Nicotiana tabacum
Nitab4.5_0009788g0030 Nicotiana tabacum
Nn2g14391 Nelumbo nucifera
Nn2g14393 Nelumbo nucifera
Nn6g34599 Nelumbo nucifera
Oeu020166.1 Olea europaea
Oeu020167.1 Olea europaea
Oeu045017.1 Olea europaea
Os11g0568700 Oryza sativa ssp. japonica
Os12g0456200 Oryza sativa ssp. japonica
Peaxi162Scf00203g00101 Petunia axillaris
Peaxi162Scf00675g00056 Petunia axillaris
Peaxi162Scf00675g00610 Petunia axillaris
Peaxi162Scf00675g00611 Petunia axillaris
Peaxi162Scf00767g00522 Petunia axillaris
PGR004G2025 Punica granatum
PGR004G2365 Punica granatum
PGSC0003DMG400021336 Solanum tuberosum
PGSC0003DMG400021337 Solanum tuberosum
PGSC0003DMG400028231 Solanum tuberosum
Phvul.001G197400 Phaseolus vulgaris
Phvul.007G266300 Phaseolus vulgaris
Phvul.007G266400 Phaseolus vulgaris
Potri.006G200900 Populus trichocarpa
Potri.006G201000 Populus trichocarpa
Potri.016G067000 Populus trichocarpa
Pp3c15_23860 Physcomitrium patens
Pp3c16_9340 Physcomitrium patens
Pp3c9_24430 Physcomitrium patens
PRCOL_00006387 Prasinoderma coloniale
Prupe.7G091100 Prunus persica
Prupe.7G091200 Prunus persica
Psat1g223320 Pisum sativum
Psat1g223360 Pisum sativum
Psat1g223560 Pisum sativum
Psat2g142840 Pisum sativum
Psat3g028200 Pisum sativum
Psat6g097960 Pisum sativum
Psat6g128200 Pisum sativum
PSO063G3472 Papaver somniferum
PSO063G7439 Papaver somniferum
PSO170G4460 Papaver somniferum
PSO339G0680 Papaver somniferum
PSO339G3824 Papaver somniferum
PSO339G5959 Papaver somniferum
PSO384G0895 Papaver somniferum
PSO384G4065 Papaver somniferum
PSO384G4950 Papaver somniferum
PSO407G0155 Papaver somniferum
PSO832G2574 Papaver somniferum
QL02p009774 Quercus lobata
QL07p026864 Quercus lobata
QL07p026881 Quercus lobata
RcHm_v2.0_Chr3g0476671 Rosa chinensis
RcHm_v2.0_Chr3g0476751 Rosa chinensis
RcHm_v2.0_Chr3g0476781 Rosa chinensis
Rhsim02G0181100 Rhododendron simsii
Rhsim03G0062200 Rhododendron simsii
Sabra06G0154600 Salix brachista
Sabra06G0154700 Salix brachista
Sabra16G0068300 Salix brachista
SalBow1G6520 Salvia bowleyana
SalBow5G5266 Salvia bowleyana
Sc07g0006350 Simmondsia chinensis
Sc22g0003100 Simmondsia chinensis
Sed0008069 Sechium edule
Sed0014416 Sechium edule
Sed0014759 Sechium edule
Sed0025654 Sechium edule
SEGI_19574 Sequoiadendron giganteum
SEGI_25149 Sequoiadendron giganteum
SGA_v2.0_scaffold116G32259 Striga asiatica
SGA_v2.0_scaffold18G08441 Striga asiatica
SGA_v2.0_scaffold31G12814 Striga asiatica
SGA_v2.0_scaffold392G50676 Striga asiatica
SHI28305 Sapria himalayana
SHI28306 Sapria himalayana
SHI39226 Sapria himalayana
SMO104G0006 Selaginella moellendorffii
SMO111G0083 Selaginella moellendorffii
SMO288G0002 Selaginella moellendorffii
SMO288G0006 Selaginella moellendorffii
SMO297G0029 Selaginella moellendorffii
SMO352G0004 Selaginella moellendorffii
SMO352G0048 Selaginella moellendorffii
SMO352G0060 Selaginella moellendorffii
SMO352G0064 Selaginella moellendorffii
SMO353G0218 Selaginella moellendorffii
SMO356G0493 Selaginella moellendorffii
SMO360G0001 Selaginella moellendorffii
SMO360G0004 Selaginella moellendorffii
SMO360G0005 Selaginella moellendorffii
SMO360G0006 Selaginella moellendorffii
SMO360G0009 Selaginella moellendorffii
SMO360G0029 Selaginella moellendorffii
Solyc01g006860.3 Solanum lycopersicum
Solyc01g006870.4 Solanum lycopersicum
Solyc10g081770.3 Solanum lycopersicum
Sopen01g002850 Solanum pennellii
Sopen01g002860 Solanum pennellii
Sopen10g032280 Solanum pennellii
Sp3g09950 Schrenkiella parvula
Sp6g36420 Schrenkiella parvula
Sp6g36440 Schrenkiella parvula
TAR369G0675 Trochodendron aralioides
TAR369G0922 Trochodendron aralioides
TAR623G0081 Trochodendron aralioides
TAR623G0995 Trochodendron aralioides
TAR633G1714 Trochodendron aralioides
THA.LOC104816627 Tarenaya hassleriana
THA.LOC104816629 Tarenaya hassleriana
THA.LOC104826799 Tarenaya hassleriana
Thecc.05G108400 Theobroma cacao
Thecc.05G108500 Theobroma cacao
Thhalv10013326m.g Eutrema salsugineum
Thhalv10014422m.g Eutrema salsugineum
Thhalv10020420m.g Eutrema salsugineum
TPR.G21244 Trifolium pratense
TPR.G25807 Trifolium pratense
TPR.G35037 Trifolium pratense
TPR.G7023 Trifolium pratense
TWI74G0853 Tripterygium wilfordii
TWI77G0744 Tripterygium wilfordii
unitig_578.g15805 Utricularia gibba
unitig_746.g26781 Utricularia gibba
vmacro07500 Vaccinium macrocarpon
vmacro09092 Vaccinium macrocarpon
VMungo0251G0199 Vigna mungo
VMungo0720G1360 Vigna mungo
VMungo1383G2242 Vigna mungo
Zm00001eb161520 Zea mays
Zm00001eb200080 Zea mays

User provided reference genes

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