Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11920 Brassica napus
A02p12270 Brassica napus
A04p14180 Brassica napus
A09p13580 Brassica napus
Aa31LG2G720 Aethionema arabicum
Aa31LG3G8700 Aethionema arabicum
Aa31LG9G700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3417 Anthoceros agrestis
Actinidia03120 Actinidia chinensis
Actinidia05215 Actinidia chinensis
Actinidia27391 Actinidia chinensis
Actinidia31818 Actinidia chinensis
Actinidia31819 Actinidia chinensis
Ah.02g116510 Amaranthus hybridus
Ah.06g187520 Amaranthus hybridus
Ah.07g207220 Amaranthus hybridus
Ah.12g057230 Amaranthus hybridus
AL271U10010 Arabidopsis lyrata
AL2G11850 Arabidopsis lyrata
AL7G48290 Arabidopsis lyrata
AL7G48360 Arabidopsis lyrata
AL8G26670 Arabidopsis lyrata
Aqoxy7G00360 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2U7QKV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2W1D5P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4R9DEN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BHNX0U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D4Q3AP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SEEZ4U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQQM93 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TJC463 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UG6FLW Arachis hypogaea
AT1G63300 Arabidopsis thaliana
AT5G41140 Arabidopsis thaliana
AT5G52280 Arabidopsis thaliana
ATR0680G405 Amborella trichopoda
Atru.chr1.459 Acer truncatum
Atru.chr9.2207 Acer truncatum
AUR62010611 Chenopodium quinoa
AUR62015986 Chenopodium quinoa
AUR62017256 Chenopodium quinoa
AUR62021194 Chenopodium quinoa
BcaB02g07906 Brassica carinata
BcaB06g27601 Brassica carinata
BcaC01g03781 Brassica carinata
BcaC02g08981 Brassica carinata
BcaC03g14546 Brassica carinata
BcaC04g22705 Brassica carinata
BcaC08g44510 Brassica carinata
BcaC08g44511 Brassica carinata
BcaC08g44513 Brassica carinata
BolC2t08125H Brassica oleracea
BolC4t26414H Brassica oleracea
BolC6t37155H Brassica oleracea
BolC9t54526H Brassica oleracea
BraA02t06256Z Brassica rapa
BraA04t17078Z Brassica rapa
BraA09t37011Z Brassica rapa
C02p19910 Brassica napus
C04p48220 Brassica napus
C06p19620 Brassica napus
C09p16080 Brassica napus
CAN.G490.29 Capsicum annuum
CAN.G792.86 Capsicum annuum
CAN.G859.17 Capsicum annuum
CANSAT21G1127 Cannabis sativa
CARHR048110 Cardamine hirsuta
CARHR213230 Cardamine hirsuta
CARHR265260 Cardamine hirsuta
Carub.0002s0152 Capsella rubella
Carub.0007s3433 Capsella rubella
Carub.0008s1238 Capsella rubella
Ca_10771_v3 Cicer arietinum L.
Ca_17547_v3 Cicer arietinum L.
Ca_24560_v3 Cicer arietinum L.
CBR_g18760 Chara braunii
Cc02_g03000 Coffea canephora
Cc08_g14420 Coffea canephora
CDE02G0263 Ceratophyllum demersum
CDE05G3158 Ceratophyllum demersum
CDE06G2561 Ceratophyllum demersum
CDE08G0918 Ceratophyllum demersum
CDE08G1528 Ceratophyllum demersum
Cfa008318 Carpinus fangiana
Ciclev10004257m.g Citrus clementina
Ciclev10018577m.g Citrus clementina
CiPaw.03G106200 Carya illinoinensis
CiPaw.04G070900 Carya illinoinensis
CiPaw.11G138000 Carya illinoinensis
CiPaw.12G095000 Carya illinoinensis
ClCG01G002910 Citrullus lanatus
ClCG07G008010 Citrullus lanatus
ClCG09G012940 Citrullus lanatus
COL.COLO4_14308 Corchorus olitorius
Cpa.g.sc107.51 Carica papaya
Cpa.g.sc202.4 Carica papaya
CsaV3_3G049930 Cucumis sativus L.
CsaV3_4G006030 Cucumis sativus L.
CsaV3_5G002990 Cucumis sativus L.
CSS0014564 Camellia sinensis var. sinensis
CSS0016128 Camellia sinensis var. sinensis
CSS0022417 Camellia sinensis var. sinensis
CSS0033349 Camellia sinensis var. sinensis
DCAR_000600 Daucus carota
DCAR_006748 Daucus carota
DCAR_009366 Daucus carota
DCAR_017803 Daucus carota
Dinv35212 Davidia involucrata
Dinv37661 Davidia involucrata
Dinv38962 Davidia involucrata
Duzib068G0855 Durio zibethinus
Duzib205G1736 Durio zibethinus
ECA232G1239 Erigeron canadensis
ECA233G5260 Erigeron canadensis
ECA240G4760 Erigeron canadensis
ECA246G0115 Erigeron canadensis
EL10Ac3g05644 Beta vulgaris
EL10Ac5g12777 Beta vulgaris
Eucgr.A02791 Eucalyptus grandis
Eucgr.D01870 Eucalyptus grandis
Eucgr.E00571 Eucalyptus grandis
FAN01G2611 Fragaria x ananassa
FAN03G2051 Fragaria x ananassa
FAN03G2448 Fragaria x ananassa
FAN04G2882 Fragaria x ananassa
FAN06G3307 Fragaria x ananassa
FAN06G3714 Fragaria x ananassa
FAN08G2193 Fragaria x ananassa
FAN10G2881 Fragaria x ananassa
FAN13G0626 Fragaria x ananassa
FAN18G1824 Fragaria x ananassa
FvH4_5g02001 Fragaria vesca
FvH4_7g29461 Fragaria vesca
Glyma.01G218100 Glycine max
Glyma.05G206100 Glycine max
Glyma.08G013000 Glycine max
Glyma.09G139300 Glycine max
Glyma.10G236100 Glycine max
Glyma.11G025100 Glycine max
Glyma.16G189700 Glycine max
Glyma.20G158400 Glycine max
Gohir.A03G015600 Gossypium hirsutum
Gohir.A08G180400 Gossypium hirsutum
Gohir.A12G226900 Gossypium hirsutum
Gohir.A12G257900 Gossypium hirsutum
Gohir.D03G152300 Gossypium hirsutum
Gohir.D03G152400 Gossypium hirsutum
Gohir.D08G199200 Gossypium hirsutum
Gohir.D12G229250 Gossypium hirsutum
Gohir.D12G259300 Gossypium hirsutum
Gorai.003G160000 Gossypium raimondii
Gorai.004G210000 Gossypium raimondii
Gorai.008G245500 Gossypium raimondii
Gorai.008G277700 Gossypium raimondii
GSVIVG01019782001 Vitis vinifera
GSVIVG01028978001 Vitis vinifera
HanXRQChr02g0047541 Helianthus annuus
HanXRQChr03g0087301 Helianthus annuus
HanXRQChr06g0165711 Helianthus annuus
HanXRQChr06g0165721 Helianthus annuus
HanXRQChr06g0165741 Helianthus annuus
HanXRQChr09g0253581 Helianthus annuus
HanXRQChr15g0495551 Helianthus annuus
HanXRQChr17g0533401 Helianthus annuus
Haze_08882 Corylus avellana
Haze_13713 Corylus avellana
Hma1.2p1_1943F.1_g308520 Hydrangea macrophylla
HPP92_014796 Vanilla planifolia
HPP92_014797 Vanilla planifolia
Hund04741 Selenicereus undatus
Hund11487 Selenicereus undatus
Hund14761 Selenicereus undatus
Lalb_Chr02g0141031 Lupinus albus
Lalb_Chr03g0034551 Lupinus albus
Lalb_Chr05g0224901 Lupinus albus
Lalb_Chr06g0161141 Lupinus albus
Lalb_Chr09g0321091 Lupinus albus
Lalb_Chr16g0389871 Lupinus albus
Lj1g0026772 Lotus japonicus
Lj1g0027221 Lotus japonicus
Lj2A188T36 Lonicera japonica
Lj2g0023168 Lotus japonicus
Lj2g0025321 Lotus japonicus
Lj3g0019481 Lotus japonicus
Lj4g0006394 Lotus japonicus
Lj5g0008064 Lotus japonicus
Lj8A233T58 Lonicera japonica
Lj8C25T5 Lonicera japonica
Lsat_1_v5_gn_3_7740 Lactuca sativa
Lsat_1_v5_gn_6_6740 Lactuca sativa
Lsat_1_v5_gn_6_87061 Lactuca sativa
Lsat_1_v5_gn_9_56001 Lactuca sativa
Manes.01G063600 Manihot esculenta
Manes.02G023900 Manihot esculenta
Manes.06G008700 Manihot esculenta
Manes.06G147000 Manihot esculenta
MBI17_g39342_MAGBIO Magnolia biondii
MBI17_g46328_MAGBIO Magnolia biondii
MBI17_g46329_MAGBIO Magnolia biondii
MBI17_g46330_MAGBIO Magnolia biondii
MBI18_g09026_MAGBIO Magnolia biondii
MBI18_g09027_MAGBIO Magnolia biondii
MD01G1200700 Malus domestica
MD06G1078600 Malus domestica
MD06G1083500 Malus domestica
MD06G1083600 Malus domestica
MD06G1083700 Malus domestica
MD06G1083800 Malus domestica
MD07G1268600 Malus domestica
MD14G1099400 Malus domestica
Medtr0415s0010 Medicago truncatula
Medtr0415s0020 Medicago truncatula
Medtr1g100633 Medicago truncatula
Medtr5g010520 Medicago truncatula
Medtr8g097350 Medicago truncatula
MELO3C003323.2 Cucumis melo
MELO3C005655.2 Cucumis melo
MELO3C016346.2 Cucumis melo
MELO3C030770.2 Cucumis melo
MELO3C033924.2 Cucumis melo
Migut.A00787 Erythranthe guttata
Migut.E01108 Erythranthe guttata
Migut.F00341 Erythranthe guttata
MSTRG.11997 Avicennia marina
MSTRG.13835 Avicennia marina
MSTRG.1880 Avicennia marina
MSTRG.25591 Avicennia marina
MSTRG.27116 Avicennia marina
MSTRG.8737 Avicennia marina
Nitab4.5_0000716g0030 Nicotiana tabacum
Nitab4.5_0001200g0170 Nicotiana tabacum
Nitab4.5_0001356g0050 Nicotiana tabacum
Nitab4.5_0004032g0050 Nicotiana tabacum
Nitab4.5_0005621g0030 Nicotiana tabacum
Nitab4.5_0009051g0010 Nicotiana tabacum
Nitab4.5_0009681g0020 Nicotiana tabacum
Nn1g01461 Nelumbo nucifera
Nn6g33502 Nelumbo nucifera
Oeu009181.1 Olea europaea
Oeu016246.1 Olea europaea
Oeu021789.1 Olea europaea
Oeu049551.1 Olea europaea
Os10g0504600 Oryza sativa ssp. japonica
Peaxi162Scf00102g01531 Petunia axillaris
Peaxi162Scf00444g00814 Petunia axillaris
Peaxi162Scf00714g00016 Petunia axillaris
PGR031G1024 Punica granatum
PGR042G0266 Punica granatum
PGR042G3805 Punica granatum
PGSC0003DMG400005777 Solanum tuberosum
PGSC0003DMG400012221 Solanum tuberosum
PGSC0003DMG400014292 Solanum tuberosum
Phvul.002G155900 Phaseolus vulgaris
Phvul.002G287700 Phaseolus vulgaris
Phvul.004G116900 Phaseolus vulgaris
Phvul.007G069700 Phaseolus vulgaris
Potri.001G106700 Populus trichocarpa
Potri.003G124600 Populus trichocarpa
Potri.012G141200 Populus trichocarpa
Potri.015G143800 Populus trichocarpa
Pp3c17_1340 Physcomitrium patens
Prupe.2G294200 Prunus persica
Prupe.5G096300 Prunus persica
Psat0s5147g0040 Pisum sativum
Psat1g133040 Pisum sativum
Psat6g199440 Pisum sativum
Psat7g035000 Pisum sativum
Psat7g123240 Pisum sativum
PSO478G0138 Papaver somniferum
PSO782G2034 Papaver somniferum
QL03p063634 Quercus lobata
QL09p014226 Quercus lobata
QL12p018168 Quercus lobata
QL93p1873_0082 Quercus lobata
RcHm_v2.0_Chr1g0377241 Rosa chinensis
RcHm_v2.0_Chr5g0075961 Rosa chinensis
RcHm_v2.0_Chr7g0198351 Rosa chinensis
Rhsim02G0225900 Rhododendron simsii
Rhsim07G0091800 Rhododendron simsii
Rhsim09G0197700 Rhododendron simsii
Sabra01G0080700 Salix brachista
Sabra03G0088100 Salix brachista
Sabra12G0105900 Salix brachista
Sabra12G0106100 Salix brachista
Sabra15G0153500 Salix brachista
Sabra15G0154700 Salix brachista
SalBow1G3630 Salvia bowleyana
SalBow6G4480 Salvia bowleyana
SalBow6G5014 Salvia bowleyana
Sc01g0009450 Simmondsia chinensis
Sc07g0009660 Simmondsia chinensis
Sc13g0008640 Simmondsia chinensis
Sed0020347 Sechium edule
Sed0024649 Sechium edule
Sed0026333 Sechium edule
Sed0026576 Sechium edule
SEGI_12183 Sequoiadendron giganteum
SEGI_19320 Sequoiadendron giganteum
SEGI_22593 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35956 Striga asiatica
SGA_v2.0_scaffold253G45119 Striga asiatica
SGA_v2.0_scaffold385G50467 Striga asiatica
SGA_v2.0_scaffold44G16722 Striga asiatica
SMO270G0011 Selaginella moellendorffii
Solyc03g025830.4 Solanum lycopersicum
Solyc08g007970.3 Solanum lycopersicum
Solyc08g080780.4 Solanum lycopersicum
Sopen03g004640 Solanum pennellii
Sopen08g003850 Solanum pennellii
Sopen08g029100 Solanum pennellii
Sp2g01220 Schrenkiella parvula
Sp6g14540 Schrenkiella parvula
Sp7g00760 Schrenkiella parvula
SpUn0010_0240 Schrenkiella parvula
TAR367G0006 Trochodendron aralioides
TAR374G1672 Trochodendron aralioides
TAR375G1033 Trochodendron aralioides
TAR636G1867 Trochodendron aralioides
TAR636G2336 Trochodendron aralioides
THA.LOC104800251 Tarenaya hassleriana
THA.LOC104809399 Tarenaya hassleriana
THA.LOC104811980 Tarenaya hassleriana
THA.LOC104818070 Tarenaya hassleriana
Thecc.03G176500 Theobroma cacao
Thecc.03G275900 Theobroma cacao
Thhalv10012668m.g Eutrema salsugineum
Thhalv10023231m.g Eutrema salsugineum
Thhalv10027632m.g Eutrema salsugineum
TPR.G12909 Trifolium pratense
TPR.G14340 Trifolium pratense
TPR.G6640 Trifolium pratense
TWI14G0864 Tripterygium wilfordii
TWI60G0760 Tripterygium wilfordii
TWI81G0663 Tripterygium wilfordii
unitig_0.g2481 Utricularia gibba
unitig_37.g12251 Utricularia gibba
unitig_46.g18786 Utricularia gibba
unitig_52.g17747 Utricularia gibba
unitig_748.g7428 Utricularia gibba
unitig_748.g8099 Utricularia gibba
vmacro09838 Vaccinium macrocarpon
vmacro11308 Vaccinium macrocarpon
vmacro13947 Vaccinium macrocarpon
VMungo0251G0235 Vigna mungo
VMungo0464G1213 Vigna mungo
VMungo0720G3022 Vigna mungo
VMungo1215G2968 Vigna mungo
Zm00001eb044090 Zea mays
Zm00001eb220750 Zea mays

User provided reference genes

Program Settings