Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p28290 Brassica napus
A04p17060 Brassica napus
A06p06400 Brassica napus
A07p08860 Brassica napus
A09p18520 Brassica napus
A09p57420 Brassica napus
A10p27070 Brassica napus
Aa31LG1G5270 Aethionema arabicum
Aa31LG2G10930 Aethionema arabicum
Aa31LG3G16650 Aethionema arabicum
Aa31LG7G14260 Aethionema arabicum
Actinidia06511 Actinidia chinensis
Actinidia19630 Actinidia chinensis
Actinidia24559 Actinidia chinensis
Actinidia25306 Actinidia chinensis
Actinidia28823 Actinidia chinensis
Actinidia29625 Actinidia chinensis
Ah.02g123540 Amaranthus hybridus
Ah.03g139940 Amaranthus hybridus
Ah.05g171310 Amaranthus hybridus
AL1G20270 Arabidopsis lyrata
AL2G18180 Arabidopsis lyrata
AL4G12100 Arabidopsis lyrata
AL6G21020 Arabidopsis lyrata
Aqoxy6G00864 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.249XAA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6Y8D8Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E0DRGW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H0Q4JL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V5VKR8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XHVA8G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z51FA8 Arachis hypogaea
AT1G09720 Arabidopsis thaliana
AT1G58215 Arabidopsis thaliana
AT2G22560 Arabidopsis thaliana
AT5G10500 Arabidopsis thaliana
ATR0767G002 Amborella trichopoda
Atru.chr13.1007 Acer truncatum
Atru.chr3.1242 Acer truncatum
AUR62003665 Chenopodium quinoa
AUR62014348 Chenopodium quinoa
AUR62017975 Chenopodium quinoa
AUR62019091 Chenopodium quinoa
BcaB04g20192 Brassica carinata
BcaB04g21244 Brassica carinata
BcaB06g26138 Brassica carinata
BcaB08g35098 Brassica carinata
BcaB08g37088 Brassica carinata
BcaC02g08642 Brassica carinata
BcaC02g08643 Brassica carinata
BcaC04g22120 Brassica carinata
BcaC09g49500 Brassica carinata
BolC1t03545H Brassica oleracea
BolC5t29531H Brassica oleracea
BolC8t51621H Brassica oleracea
BolC9t59457H Brassica oleracea
BraA01t02958Z Brassica rapa
BraA04t17335Z Brassica rapa
BraA06t23851Z Brassica rapa
BraA09t41134Z Brassica rapa
BraA10t44759Z Brassica rapa
C01p35840 Brassica napus
C04p51800 Brassica napus
C05p07800 Brassica napus
C08p40510 Brassica napus
C09p23130 Brassica napus
C09p66770 Brassica napus
CAN.G1344.17 Capsicum annuum
CAN.G193.9 Capsicum annuum
CAN.G28.9 Capsicum annuum
CAN.G3566.1 Capsicum annuum
CAN.G475.24 Capsicum annuum
CAN.G525.25 Capsicum annuum
CAN.G525.27 Capsicum annuum
CAN.G525.28 Capsicum annuum
CAN.G712.6 Capsicum annuum
CANSAT01G1238 Cannabis sativa
CANSAT35G1076 Cannabis sativa
CARHR009690 Cardamine hirsuta
CARHR053800 Cardamine hirsuta
CARHR113750 Cardamine hirsuta
CARHR202790 Cardamine hirsuta
Carub.0001s0906 Capsella rubella
Carub.0002s0639 Capsella rubella
Carub.0004s0172 Capsella rubella
Carub.0006s0898 Capsella rubella
Ca_05440_v3 Cicer arietinum L.
Ca_22611_v3 Cicer arietinum L.
Ca_22703_v3 Cicer arietinum L.
Ca_23437_v3 Cicer arietinum L.
Ca_23438_v3 Cicer arietinum L.
Ca_29525_v3 Cicer arietinum L.
Cc07_g14070 Coffea canephora
Cc10_g15910 Coffea canephora
CDE01G0734 Ceratophyllum demersum
CDE02G2365 Ceratophyllum demersum
CDE02G3475 Ceratophyllum demersum
Cfa006879 Carpinus fangiana
Cfa013799 Carpinus fangiana
Ciclev10003617m.g Citrus clementina
Ciclev10026991m.g Citrus clementina
CiPaw.07G165100 Carya illinoinensis
CiPaw.08G140400 Carya illinoinensis
ClCG10G007750 Citrullus lanatus
ClCG11G014600 Citrullus lanatus
COL.COLO4_05651 Corchorus olitorius
COL.COLO4_35251 Corchorus olitorius
COL.COLO4_37692 Corchorus olitorius
Cpa.g.sc21.25 Carica papaya
Cpa.g.sc55.22 Carica papaya
CsaV3_3G006880 Cucumis sativus L.
CsaV3_3G048010 Cucumis sativus L.
CSS0007527 Camellia sinensis var. sinensis
CSS0024127 Camellia sinensis var. sinensis
CSS0027609 Camellia sinensis var. sinensis
CSS0041038 Camellia sinensis var. sinensis
CSS0048611 Camellia sinensis var. sinensis
DCAR_002264 Daucus carota
DCAR_003446 Daucus carota
DCAR_009559 Daucus carota
DCAR_011663 Daucus carota
DCAR_021171 Daucus carota
DCAR_030791 Daucus carota
Dinv13599 Davidia involucrata
Dinv33010 Davidia involucrata
Dinv36933 Davidia involucrata
Dinv42610 Davidia involucrata
Duzib093G0209 Durio zibethinus
Duzib116G0851 Durio zibethinus
Duzib147G1366 Durio zibethinus
Duzib187G0220 Durio zibethinus
Duzib264G0354 Durio zibethinus
ECA232G1341 Erigeron canadensis
ECA238G2576 Erigeron canadensis
ECA246G1829 Erigeron canadensis
ECA247G1259 Erigeron canadensis
EL10Ac1g00994 Beta vulgaris
EL10Ac6g15203 Beta vulgaris
Eucgr.F02153 Eucalyptus grandis
Eucgr.I00560 Eucalyptus grandis
Eucgr.L02805 Eucalyptus grandis
FAN04G2279 Fragaria x ananassa
FAN08G0850 Fragaria x ananassa
FAN18G1798 Fragaria x ananassa
FAN23G0623 Fragaria x ananassa
FAN26G0203 Fragaria x ananassa
FAN28G2247 Fragaria x ananassa
FvH4_1g19623 Fragaria vesca
FvH4_5g34781 Fragaria vesca
Glyma.01G022900 Glycine max
Glyma.02G214500 Glycine max
Glyma.04G095100 Glycine max
Glyma.06G096900 Glycine max
Glyma.08G279300 Glycine max
Glyma.09G199400 Glycine max
Glyma.14G182000 Glycine max
Gohir.A01G126550 Gossypium hirsutum
Gohir.A02G144700 Gossypium hirsutum
Gohir.A05G264700 Gossypium hirsutum
Gohir.A06G032100 Gossypium hirsutum
Gohir.A10G088100 Gossypium hirsutum
Gohir.A11G207100 Gossypium hirsutum
Gohir.A12G084600 Gossypium hirsutum
Gohir.D03G035900 Gossypium hirsutum
Gohir.D05G267100 Gossypium hirsutum
Gohir.D06G031301 Gossypium hirsutum
Gohir.D10G100000 Gossypium hirsutum
Gohir.D11G216200 Gossypium hirsutum
Gohir.D12G079801 Gossypium hirsutum
Gorai.002G139100 Gossypium raimondii
Gorai.003G037600 Gossypium raimondii
Gorai.007G232400 Gossypium raimondii
Gorai.008G092800 Gossypium raimondii
Gorai.009G279300 Gossypium raimondii
Gorai.010G034500 Gossypium raimondii
Gorai.011G109600 Gossypium raimondii
GSVIVG01004476001 Vitis vinifera
GSVIVG01007135001 Vitis vinifera
GSVIVG01009183001 Vitis vinifera
HanXRQChr04g0111461 Helianthus annuus
HanXRQChr07g0192981 Helianthus annuus
HanXRQChr09g0259571 Helianthus annuus
HanXRQChr12g0369051 Helianthus annuus
Haze_03878 Corylus avellana
Haze_22462 Corylus avellana
Hma1.2p1_0433F.1_g152080 Hydrangea macrophylla
Hma1.2p1_1058F.1_g252890 Hydrangea macrophylla
Hma1.2p1_3163F.1_g333510 Hydrangea macrophylla
HPP92_015406 Vanilla planifolia
HPP92_015569 Vanilla planifolia
HPP92_021202 Vanilla planifolia
HPP92_026991 Vanilla planifolia
Lalb_Chr04g0252821 Lupinus albus
Lalb_Chr05g0216391 Lupinus albus
Lalb_Chr05g0228521 Lupinus albus
Lalb_Chr09g0334731 Lupinus albus
Lalb_Chr11g0064961 Lupinus albus
Lalb_Chr16g0381621 Lupinus albus
Lalb_Chr17g0344561 Lupinus albus
Lj1g0004553 Lotus japonicus
Lj2g0002242 Lotus japonicus
Lj4A717G29 Lonicera japonica
Lj4A737T60 Lonicera japonica
Lj4C717G9 Lonicera japonica
Lj4g0002966 Lotus japonicus
LjContig00408g0026946 Lotus japonicus
Lju188C3T3 Lonicera japonica
Lsat_1_v5_gn_2_70341 Lactuca sativa
Lsat_1_v5_gn_4_143380 Lactuca sativa
Manes.02G144700 Manihot esculenta
Manes.12G126100 Manihot esculenta
Manes.13G100200 Manihot esculenta
MBI16_g12469_MAGBIO Magnolia biondii
MBI16_g27576_MAGBIO Magnolia biondii
MD01G1039700 Malus domestica
MD08G1198300 Malus domestica
MD15G1312100 Malus domestica
MD15G1385600 Malus domestica
Medtr3g100190 Medicago truncatula
Medtr5g032060 Medicago truncatula
Medtr5g066340 Medicago truncatula
Medtr6g016950 Medicago truncatula
Medtr8g471130 Medicago truncatula
MELO3C003522.2 Cucumis melo
MELO3C016417.2 Cucumis melo
Migut.K00800 Erythranthe guttata
MSTRG.15686 Avicennia marina
MSTRG.23381 Avicennia marina
MSTRG.3731 Avicennia marina
Nitab4.5_0000128g0080 Nicotiana tabacum
Nitab4.5_0000131g0230 Nicotiana tabacum
Nitab4.5_0000902g0330 Nicotiana tabacum
Nitab4.5_0005913g0010 Nicotiana tabacum
Nitab4.5_0007624g0060 Nicotiana tabacum
Nitab4.5_0009469g0020 Nicotiana tabacum
Nitab4.5_0011938g0020 Nicotiana tabacum
Nitab4.5_0013275g0010 Nicotiana tabacum
Nn1g00628 Nelumbo nucifera
Nn1g05579 Nelumbo nucifera
Nn2g14677 Nelumbo nucifera
Oeu012459.1 Olea europaea
Oeu031119.1 Olea europaea
Oeu049770.1 Olea europaea
Oeu053600.1 Olea europaea
Os01g0835800 Oryza sativa ssp. japonica
Os01g0976500 Oryza sativa ssp. japonica
Os05g0119400 Oryza sativa ssp. japonica
Os05g0466200 Oryza sativa ssp. japonica
Os07g0695400 Oryza sativa ssp. japonica
Peaxi162Scf00044g02320 Petunia axillaris
Peaxi162Scf00196g00221 Petunia axillaris
Peaxi162Scf00454g00037 Petunia axillaris
Peaxi162Scf00474g00710 Petunia axillaris
PGR031G2648 Punica granatum
PGR031G2813 Punica granatum
PGSC0003DMG400009359 Solanum tuberosum
PGSC0003DMG400014585 Solanum tuberosum
PGSC0003DMG402023624 Solanum tuberosum
Phvul.002G146900 Phaseolus vulgaris
Phvul.003G288800 Phaseolus vulgaris
Phvul.008G182000 Phaseolus vulgaris
Phvul.009G036500 Phaseolus vulgaris
Potri.002G106400 Populus trichocarpa
Potri.005G147300 Populus trichocarpa
Potri.007G011300 Populus trichocarpa
Prupe.1G532400 Prunus persica
Prupe.6G201900 Prunus persica
Psat2g065440 Pisum sativum
Psat2g082120 Pisum sativum
Psat4g119680 Pisum sativum
Psat5g049000 Pisum sativum
PSO170G1558 Papaver somniferum
PSO210G5358 Papaver somniferum
PSO541G1432 Papaver somniferum
PSO675G0381 Papaver somniferum
QL06p035808 Quercus lobata
QL09p017840 Quercus lobata
RcHm_v2.0_Chr2g0111181 Rosa chinensis
RcHm_v2.0_Chr7g0235421 Rosa chinensis
Rhsim07G0212000 Rhododendron simsii
Rhsim08G0016600 Rhododendron simsii
Rhsim10G0173100 Rhododendron simsii
Rhsim12G0185800 Rhododendron simsii
Sabra02G0083700 Salix brachista
Sabra07G0008800 Salix brachista
SalBow3G0633 Salvia bowleyana
SalBow3G1258 Salvia bowleyana
SalBow5G0655 Salvia bowleyana
SalBow5G1773 Salvia bowleyana
SalBow6G1839 Salvia bowleyana
Sc03g0000370 Simmondsia chinensis
Sc26g0002980 Simmondsia chinensis
Sed0003025 Sechium edule
Sed0004401 Sechium edule
Sed0017422 Sechium edule
SGA_v2.0_scaffold195G40856 Striga asiatica
SGA_v2.0_scaffold45G17232 Striga asiatica
SHI20375 Sapria himalayana
SHI21900 Sapria himalayana
Solyc04g014380.3 Solanum lycopersicum
Solyc04g076350.1 Solanum lycopersicum
Solyc05g051390.3 Solanum lycopersicum
Solyc11g010630.4 Solanum lycopersicum
Sopen00g008090 Solanum pennellii
Sopen04g006500 Solanum pennellii
Sopen05g029790 Solanum pennellii
Sopen11g005450 Solanum pennellii
Sp1g08310 Schrenkiella parvula
Sp2g05410 Schrenkiella parvula
Sp4g01600 Schrenkiella parvula
Sp6g32930 Schrenkiella parvula
TAR381G0916 Trochodendron aralioides
TAR625G0907 Trochodendron aralioides
THA.LOC104798693 Tarenaya hassleriana
THA.LOC104799790 Tarenaya hassleriana
THA.LOC104807669 Tarenaya hassleriana
THA.LOC104816795 Tarenaya hassleriana
Thecc.01G090200 Theobroma cacao
Thecc.08G071100 Theobroma cacao
Thhalv10000036m.g Eutrema salsugineum
Thhalv10009464m.g Eutrema salsugineum
Thhalv10015659m.g Eutrema salsugineum
Thhalv10023956m.g Eutrema salsugineum
TPR.G14612 Trifolium pratense
TPR.G34710 Trifolium pratense
TPR.G36837 Trifolium pratense
TPR.G39018 Trifolium pratense
TPR.G6336 Trifolium pratense
TPR.G7844 Trifolium pratense
TWI53G0697 Tripterygium wilfordii
TWI56G0012 Tripterygium wilfordii
TWI77G0581 Tripterygium wilfordii
unitig_748.g7245 Utricularia gibba
unitig_899.g14569 Utricularia gibba
vmacro04650 Vaccinium macrocarpon
vmacro04651 Vaccinium macrocarpon
vmacro18557 Vaccinium macrocarpon
VMungo0251G2689 Vigna mungo
VMungo0331G0738 Vigna mungo
VMungo0647G2357 Vigna mungo
VMungo1215G1342 Vigna mungo
VMungo1309G2306 Vigna mungo
Zm00001eb112090 Zea mays
Zm00001eb139670 Zea mays
Zm00001eb148740 Zea mays
Zm00001eb265800 Zea mays
Zm00001eb289940 Zea mays
Zm00001eb351580 Zea mays
Zm00001eb362120 Zea mays
Zm00001eb362130 Zea mays
Zm00001eb368190 Zea mays

User provided reference genes

Program Settings