Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p16730 Brassica napus
A07p13920 Brassica napus
A07p31040 Brassica napus
A07p37040 Brassica napus
A08p28270 Brassica napus
A09p41490 Brassica napus
Aa31LG4G10350 Aethionema arabicum
Aa31LG5G21870 Aethionema arabicum
Aa31LG5G4200 Aethionema arabicum
Aa31LG7G7320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3113 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.941 Anthoceros agrestis
Actinidia15091 Actinidia chinensis
Actinidia19126 Actinidia chinensis
Actinidia19354 Actinidia chinensis
Actinidia29899 Actinidia chinensis
Actinidia34265 Actinidia chinensis
Ah.02g110660 Amaranthus hybridus
Ah.03g133050 Amaranthus hybridus
Ah.11g051270 Amaranthus hybridus
AL1G24600 Arabidopsis lyrata
AL1G37070 Arabidopsis lyrata
AL2G30030 Arabidopsis lyrata
Aqoxy3G01201 Aquilegia oxysepala
Aqoxy5G03776 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.454J86 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W50V02 Arachis hypogaea
AT1G12960 Arabidopsis thaliana
AT1G23290 Arabidopsis thaliana
AT1G70600 Arabidopsis thaliana
ATR0012G038 Amborella trichopoda
ATR0757G196 Amborella trichopoda
Atru.chr1.3716 Acer truncatum
Atru.chr11.2105 Acer truncatum
Atru.chr6.2395 Acer truncatum
Atru.chr9.2559 Acer truncatum
AUR62005458 Chenopodium quinoa
AUR62011746 Chenopodium quinoa
AUR62024283 Chenopodium quinoa
AUR62024583 Chenopodium quinoa
AUR62024586 Chenopodium quinoa
AUR62024589 Chenopodium quinoa
BcaB03g11931 Brassica carinata
BcaB03g14152 Brassica carinata
BcaB03g14826 Brassica carinata
BcaB03g15548 Brassica carinata
BcaB05g24598 Brassica carinata
BcaB07g32317 Brassica carinata
BcaC03g15212 Brassica carinata
BcaC05g26237 Brassica carinata
BcaC06g35031 Brassica carinata
BcaC07g39192 Brassica carinata
BcaC08g45813 Brassica carinata
BolC2t08842H Brassica oleracea
BolC5t30947H Brassica oleracea
BolC6t38727H Brassica oleracea
BolC6t39524H Brassica oleracea
BolC7t42572H Brassica oleracea
BolC7t44766H Brassica oleracea
BolC8t49821H Brassica oleracea
BraA02t06727Z Brassica rapa
BraA07t29147Z Brassica rapa
BraA07t30739Z Brassica rapa
BraA07t31266Z Brassica rapa
BraA08t34758Z Brassica rapa
BraA09t39641Z Brassica rapa
C02p27990 Brassica napus
C05p22490 Brassica napus
C06p36060 Brassica napus
C06p44600 Brassica napus
C07p20470 Brassica napus
C07p42380 Brassica napus
C08p21820 Brassica napus
CAN.G1028.9 Capsicum annuum
CAN.G1693.1 Capsicum annuum
CAN.G338.21 Capsicum annuum
CAN.G993.23 Capsicum annuum
CANSAT01G2820 Cannabis sativa
CANSAT80G0051 Cannabis sativa
CARHR023730 Cardamine hirsuta
CARHR063830 Cardamine hirsuta
Carub.0001s2288 Capsella rubella
Carub.0002s1733 Capsella rubella
Ca_16136_v3 Cicer arietinum L.
Ca_22582_v3 Cicer arietinum L.
Ca_22793_v3 Cicer arietinum L.
Ca_22795_v3 Cicer arietinum L.
CBR_g26337 Chara braunii
Cc00_g04040 Coffea canephora
Cc00_g30750 Coffea canephora
Cc04_g11730 Coffea canephora
Cc11_g15690 Coffea canephora
CDE02G3114 Ceratophyllum demersum
CDE04G3012 Ceratophyllum demersum
CDE09G0224 Ceratophyllum demersum
Cfa008677 Carpinus fangiana
Cfa009207 Carpinus fangiana
Cfa019204 Carpinus fangiana
CiPaw.06G068100 Carya illinoinensis
CiPaw.09G060400 Carya illinoinensis
CiPaw.12G030300 Carya illinoinensis
ClCG01G013450 Citrullus lanatus
ClCG05G025700 Citrullus lanatus
COL.COLO4_05570 Corchorus olitorius
COL.COLO4_08413 Corchorus olitorius
COL.COLO4_16313 Corchorus olitorius
COL.COLO4_20240 Corchorus olitorius
COL.COLO4_24262 Corchorus olitorius
COL.COLO4_29145 Corchorus olitorius
COL.COLO4_30245 Corchorus olitorius
COL.COLO4_35485 Corchorus olitorius
Cpa.g.sc110.8 Carica papaya
Cpa.g.sc33.14 Carica papaya
Cre02.g115200 Chlamydomonas reinhardtii
CsaV3_1G008800 Cucumis sativus L.
CsaV3_5G031180 Cucumis sativus L.
CSS0000472 Camellia sinensis var. sinensis
CSS0009734 Camellia sinensis var. sinensis
CSS0045519 Camellia sinensis var. sinensis
DCAR_007057 Daucus carota
DCAR_016458 Daucus carota
DCAR_017671 Daucus carota
DCAR_021583 Daucus carota
Dinv15236 Davidia involucrata
Dinv20605 Davidia involucrata
Dinv38543 Davidia involucrata
Duzib062G0003 Durio zibethinus
Duzib205G2045 Durio zibethinus
Duzib248G0293 Durio zibethinus
Duzib251G0442 Durio zibethinus
Duzib268G0400 Durio zibethinus
ECA246G3131 Erigeron canadensis
EL10Ac3g05532 Beta vulgaris
EL10Ac5g10667 Beta vulgaris
EL10Ac6g13627 Beta vulgaris
EL10Ac6g13802 Beta vulgaris
Eucgr.B03289 Eucalyptus grandis
Eucgr.K02805 Eucalyptus grandis
FAN07G0498 Fragaria x ananassa
FAN07G2023 Fragaria x ananassa
FAN12G1458 Fragaria x ananassa
FAN12G2675 Fragaria x ananassa
FAN12G3348 Fragaria x ananassa
FAN16G1725 Fragaria x ananassa
FAN17G0907 Fragaria x ananassa
FAN17G1159 Fragaria x ananassa
FAN21G2882 Fragaria x ananassa
FAN22G0091 Fragaria x ananassa
FAN22G0116 Fragaria x ananassa
FAN25G1250 Fragaria x ananassa
FvH4_3g11450 Fragaria vesca
FvH4_4g12340 Fragaria vesca
FvH4_4g25520 Fragaria vesca
Glyma.01G026100 Glycine max
Glyma.02G038700 Glycine max
Glyma.04G187500 Glycine max
Glyma.05G040900 Glycine max
Glyma.06G178300 Glycine max
Glyma.17G085400 Glycine max
Gohir.A01G159500 Gossypium hirsutum
Gohir.A03G135500 Gossypium hirsutum
Gohir.A04G136600 Gossypium hirsutum
Gohir.A09G025100 Gossypium hirsutum
Gohir.D02G159000 Gossypium hirsutum
Gohir.D04G179700 Gossypium hirsutum
Gohir.D09G024400 Gossypium hirsutum
Gorai.002G186800 Gossypium raimondii
Gorai.005G178700 Gossypium raimondii
Gorai.005G178800 Gossypium raimondii
Gorai.006G028600 Gossypium raimondii
Gorai.012G172900 Gossypium raimondii
GSVIVG01007667001 Vitis vinifera
GSVIVG01032405001 Vitis vinifera
HanXRQChr05g0142871 Helianthus annuus
HanXRQChr05g0155331 Helianthus annuus
HanXRQChr06g0182741 Helianthus annuus
HanXRQChr10g0296191 Helianthus annuus
Haze_07571 Corylus avellana
Haze_12244 Corylus avellana
Haze_26796 Corylus avellana
Haze_27666 Corylus avellana
Hma1.2p1_0046F.1_g027020 Hydrangea macrophylla
Hma1.2p1_0592F.1_g185600 Hydrangea macrophylla
Hma1.2p1_0933F.1_g238443 Hydrangea macrophylla
Hma1.2p1_0933F.1_g238450 Hydrangea macrophylla
HPP92_009225 Vanilla planifolia
HPP92_016204 Vanilla planifolia
Lalb_Chr05g0216581 Lupinus albus
Lalb_Chr07g0182961 Lupinus albus
Lalb_Chr09g0326121 Lupinus albus
Lalb_Chr12g0201871 Lupinus albus
Lalb_Chr13g0297651 Lupinus albus
Lalb_Chr16g0381941 Lupinus albus
Lj2g0002028 Lotus japonicus
Lj4g0001326 Lotus japonicus
Lj4g0013245 Lotus japonicus
Lsat_1_v5_gn_1_27840 Lactuca sativa
Lsat_1_v5_gn_5_14421 Lactuca sativa
Manes.06G109351 Manihot esculenta
Manes.12G023300 Manihot esculenta
Manes.13G025100 Manihot esculenta
Manes.14G061401 Manihot esculenta
Mapoly0033s0117 Marchantia polymorpha
Mapoly0078s0013 Marchantia polymorpha
MBI10_g21416_MAGBIO Magnolia biondii
MBI10_g30159_MAGBIO Magnolia biondii
MBI14_g31921_MAGBIO Magnolia biondii
MBI16_g16365_MAGBIO Magnolia biondii
MBI19_g16227_MAGBIO Magnolia biondii
MBI19_g36610_MAGBIO Magnolia biondii
MCO07G554 Micromonas commoda
MD09G1026900 Malus domestica
MD10G1090300 Malus domestica
MD13G1102000 Malus domestica
MD16G1102500 Malus domestica
MD17G1026900 Malus domestica
Medtr3g077050 Medicago truncatula
Medtr4g119380 Medicago truncatula
Medtr5g033090 Medicago truncatula
Medtr8g069460 Medicago truncatula
MELO3C002294.2 Cucumis melo
MELO3C011956.2 Cucumis melo
Migut.I00476 Erythranthe guttata
Migut.K00594 Erythranthe guttata
Migut.O00145 Erythranthe guttata
MSTRG.11487 Avicennia marina
MSTRG.569 Avicennia marina
MSTRG.7926 Avicennia marina
Nitab4.5_0000003g0780 Nicotiana tabacum
Nitab4.5_0000081g0060 Nicotiana tabacum
Nitab4.5_0000564g0270 Nicotiana tabacum
Nitab4.5_0001315g0100 Nicotiana tabacum
Nitab4.5_0001683g0030 Nicotiana tabacum
Nitab4.5_0001965g0060 Nicotiana tabacum
Nitab4.5_0004595g0010 Nicotiana tabacum
Nitab4.5_0004937g0050 Nicotiana tabacum
Nitab4.5_0005004g0030 Nicotiana tabacum
Nitab4.5_0005842g0030 Nicotiana tabacum
Nitab4.5_0007141g0040 Nicotiana tabacum
Nitab4.5_0008975g0020 Nicotiana tabacum
Nn1g03149 Nelumbo nucifera
Nn1g06069 Nelumbo nucifera
Nn2g10311 Nelumbo nucifera
Nn2g10965 Nelumbo nucifera
Nn3g16723 Nelumbo nucifera
Nn3g20710 Nelumbo nucifera
Nn4g22629 Nelumbo nucifera
Nn6g34270 Nelumbo nucifera
Oeu015408.1 Olea europaea
Oeu036015.1 Olea europaea
Oeu036514.1 Olea europaea
Oeu059908.1 Olea europaea
Os02g0175600 Oryza sativa ssp. japonica
Os03g0408300 Oryza sativa ssp. japonica
Os07g0613200 Oryza sativa ssp. japonica
Peaxi162Scf00089g00145 Petunia axillaris
Peaxi162Scf00763g00046 Petunia axillaris
PGR044G0407 Punica granatum
PGR102G1151 Punica granatum
PGR119G2391 Punica granatum
PGSC0003DMG400016069 Solanum tuberosum
PGSC0003DMG400018180 Solanum tuberosum
PGSC0003DMG400026987 Solanum tuberosum
Phvul.002G150100 Phaseolus vulgaris
Phvul.003G204100 Phaseolus vulgaris
Phvul.009G174700 Phaseolus vulgaris
Potri.006G202300 Populus trichocarpa
Potri.008G187000 Populus trichocarpa
Potri.010G045800 Populus trichocarpa
Potri.016G069000 Populus trichocarpa
Pp3c16_22430 Physcomitrium patens
Pp3c20_18830 Physcomitrium patens
Pp3c23_8220 Physcomitrium patens
Pp3c25_13260 Physcomitrium patens
Pp3c5_26860 Physcomitrium patens
Pp3c6_3470 Physcomitrium patens
Pp3c8_5770 Physcomitrium patens
PRCOL_00003699 Prasinoderma coloniale
Prupe.1G243800 Prunus persica
Prupe.3G291800 Prunus persica
Prupe.4G102400 Prunus persica
Psat0s277g0040 Pisum sativum
Psat2g086840 Pisum sativum
Psat4g116760 Pisum sativum
Psat4g202640 Pisum sativum
Psat4g202680 Pisum sativum
Psat5g116040 Pisum sativum
PSO017G6649 Papaver somniferum
PSO063G2739 Papaver somniferum
PSO478G4395 Papaver somniferum
PSO832G3541 Papaver somniferum
QL03p058245 Quercus lobata
QL10p007245 Quercus lobata
RcHm_v2.0_Chr2g0172781 Rosa chinensis
RcHm_v2.0_Chr4g0432911 Rosa chinensis
RcHm_v2.0_Chr5g0018391 Rosa chinensis
Rhsim08G0176400 Rhododendron simsii
Rhsim12G0167500 Rhododendron simsii
Sabra06G0067500 Salix brachista
Sabra06G0155600 Salix brachista
Sabra08G0141600 Salix brachista
Sabra10G0022700 Salix brachista
Sabra16G0069900 Salix brachista
SalBow3G4356 Salvia bowleyana
SalBow5G3080 Salvia bowleyana
SalBow6G0391 Salvia bowleyana
Sc04g0001590 Simmondsia chinensis
Sc04g0009440 Simmondsia chinensis
Sc10g0010210 Simmondsia chinensis
Sed0002343 Sechium edule
Sed0007425 Sechium edule
Sed0010183 Sechium edule
Sed0019027 Sechium edule
SEGI_00231 Sequoiadendron giganteum
SEGI_17615 Sequoiadendron giganteum
SEGI_41534 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10803 Striga asiatica
SGA_v2.0_scaffold90G27851 Striga asiatica
SHI17230 Sapria himalayana
SMO361G0030 Selaginella moellendorffii
Solyc03g112360.1 Solanum lycopersicum
Solyc06g071720.1 Solanum lycopersicum
Sopen03g031460 Solanum pennellii
Sopen06g028020 Solanum pennellii
Sp1g20730 Schrenkiella parvula
Sp5g25760 Schrenkiella parvula
TAR371G0729 Trochodendron aralioides
TAR374G0710 Trochodendron aralioides
TAR622G0020 Trochodendron aralioides
TAR629G1127 Trochodendron aralioides
THA.LOC104809056 Tarenaya hassleriana
THA.LOC104822163 Tarenaya hassleriana
THA.LOC104822984 Tarenaya hassleriana
THA.LOC104825660 Tarenaya hassleriana
Thecc.02G259300 Theobroma cacao
Thecc.03G020400 Theobroma cacao
Thhalv10009027m.g Eutrema salsugineum
Thhalv10019240m.g Eutrema salsugineum
TPR.G14144 Trifolium pratense
TPR.G36178 Trifolium pratense
TPR.G38806 Trifolium pratense
TWI18G1319 Tripterygium wilfordii
TWI23G0435 Tripterygium wilfordii
TWI39G1147 Tripterygium wilfordii
TWI75G1063 Tripterygium wilfordii
unitig_22.g6290 Utricularia gibba
unitig_26.g9613 Utricularia gibba
unitig_8.g3061 Utricularia gibba
VMungo1215G1059 Vigna mungo
VMungo1215G2689 Vigna mungo
VMungo1309G1936 Vigna mungo
Zm00001eb109030 Zea mays
Zm00001eb327330 Zea mays

User provided reference genes

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