Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p05800 Brassica napus
A08p26460 Brassica napus
A08p33080 Brassica napus
A09p38700 Brassica napus
A09p64140 Brassica napus
A10p25110 Brassica napus
Aa31LG2G120 Aethionema arabicum
Aa31LG3G14580 Aethionema arabicum
Aa31LG7G9950 Aethionema arabicum
Actinidia02325 Actinidia chinensis
Actinidia08053 Actinidia chinensis
Actinidia09626 Actinidia chinensis
Actinidia26872 Actinidia chinensis
Actinidia39797 Actinidia chinensis
Ah.02g130770 Amaranthus hybridus
Ah.03g135960 Amaranthus hybridus
Ah.09g234320 Amaranthus hybridus
Ah.14g087730 Amaranthus hybridus
AL1G23260 Arabidopsis lyrata
AL1G40650 Arabidopsis lyrata
AL2G13460 Arabidopsis lyrata
AL6G23690 Arabidopsis lyrata
Aqoxy112s004 Aquilegia oxysepala
Aqoxy1G04153 Aquilegia oxysepala
Aqoxy3G01590 Aquilegia oxysepala
Aqoxy5G03292 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.972LPJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DG5972 Arachis hypogaea
AT1G12020 Arabidopsis thaliana
AT1G24270 Arabidopsis thaliana
AT1G62422 Arabidopsis thaliana
AT5G13090 Arabidopsis thaliana
ATR0561G128 Amborella trichopoda
ATR1128G100 Amborella trichopoda
Atru.chr1.2488 Acer truncatum
Atru.chr11.2361 Acer truncatum
Atru.chr6.3274 Acer truncatum
Atru.chr6.3289 Acer truncatum
BcaB01g05378 Brassica carinata
BcaB02g06434 Brassica carinata
BcaB03g12067 Brassica carinata
BcaB03g13214 Brassica carinata
BcaB08g37434 Brassica carinata
BcaC01g01628 Brassica carinata
BcaC02g09637 Brassica carinata
BcaC04g19153 Brassica carinata
BcaC05g25231 Brassica carinata
BcaC05g26535 Brassica carinata
BcaC05g26728 Brassica carinata
BcaC07g41737 Brassica carinata
BcaC07g41753 Brassica carinata
BolC3t13182H Brassica oleracea
BolC3t19652H Brassica oleracea
BolC4t26074H Brassica oleracea
BolC5t29862H Brassica oleracea
BolC5t31310H Brassica oleracea
BolC8t49143H Brassica oleracea
BolC8t52313H Brassica oleracea
BolC9t59238H Brassica oleracea
BraA03t09919Z Brassica rapa
BraA06t24133Z Brassica rapa
BraA08t34598Z Brassica rapa
BraA08t35228Z Brassica rapa
BraA09t39378Z Brassica rapa
BraA09t41760Z Brassica rapa
BraA10t44573Z Brassica rapa
C03p06750 Brassica napus
C03p73590 Brassica napus
C05p11160 Brassica napus
C05p25910 Brassica napus
C08p15130 Brassica napus
C08p47760 Brassica napus
C09p64000 Brassica napus
CANSAT01G1962 Cannabis sativa
CANSAT56G1712 Cannabis sativa
CARHR012370 Cardamine hirsuta
CARHR026820 Cardamine hirsuta
CARHR049500 Cardamine hirsuta
CARHR200380 Cardamine hirsuta
Carub.0001s1170 Capsella rubella
Carub.0002s0255 Capsella rubella
Carub.0006s1126 Capsella rubella
Ca_00711_v3 Cicer arietinum L.
Ca_21051_v3 Cicer arietinum L.
Cc09_g01000 Coffea canephora
Cc11_g17210 Coffea canephora
CDE02G1881 Ceratophyllum demersum
CDE05G2241 Ceratophyllum demersum
CDE05G3358 Ceratophyllum demersum
Cfa000121 Carpinus fangiana
Cfa009388 Carpinus fangiana
Cfa014304 Carpinus fangiana
Ciclev10016596m.g Citrus clementina
Ciclev10016686m.g Citrus clementina
Ciclev10032426m.g Citrus clementina
CiPaw.03G273700 Carya illinoinensis
CiPaw.05G107000 Carya illinoinensis
CiPaw.06G105100 Carya illinoinensis
CiPaw.10G076600 Carya illinoinensis
ClCG01G009950 Citrullus lanatus
ClCG01G021560 Citrullus lanatus
ClCG06G002040 Citrullus lanatus
ClCG07G015400 Citrullus lanatus
COL.COLO4_05012 Corchorus olitorius
COL.COLO4_06543 Corchorus olitorius
COL.COLO4_07262 Corchorus olitorius
COL.COLO4_29758 Corchorus olitorius
COL.COLO4_31861 Corchorus olitorius
Cpa.g.sc132.38 Carica papaya
Cpa.g.sc152.64 Carica papaya
CsaV3_1G018460 Cucumis sativus L.
CsaV3_4G002990 Cucumis sativus L.
CsaV3_6G008090 Cucumis sativus L.
CsaV3_6G048580 Cucumis sativus L.
CSS0035216 Camellia sinensis var. sinensis
CSS0045694 Camellia sinensis var. sinensis
DCAR_024660 Daucus carota
DCAR_025273 Daucus carota
DCAR_026447 Daucus carota
Dinv07387 Davidia involucrata
Dinv08708 Davidia involucrata
Dinv11691 Davidia involucrata
Dinv13957 Davidia involucrata
Dinv17588 Davidia involucrata
Dinv39762 Davidia involucrata
Duzib068G1079 Durio zibethinus
Duzib084G0502 Durio zibethinus
Duzib138G0470 Durio zibethinus
Duzib160G0325 Durio zibethinus
Duzib192G0034 Durio zibethinus
Duzib205G0733 Durio zibethinus
Duzib235G0175 Durio zibethinus
Duzib251G0275 Durio zibethinus
Duzib268G1086 Durio zibethinus
ECA233G2352 Erigeron canadensis
ECA234G1243 Erigeron canadensis
EL10Ac6g13538 Beta vulgaris
EL10Ac8g20168 Beta vulgaris
Eucgr.D01385 Eucalyptus grandis
Eucgr.E03956 Eucalyptus grandis
FAN07G2239 Fragaria x ananassa
FAN09G0464 Fragaria x ananassa
FAN12G0785 Fragaria x ananassa
FAN17G0353 Fragaria x ananassa
FAN25G0584 Fragaria x ananassa
FvH4_3g01120 Fragaria vesca
FvH4_4g23440 Fragaria vesca
FvH4_6g41890 Fragaria vesca
Glyma.07G264800 Glycine max
Glyma.09G009200 Glycine max
Glyma.15G113700 Glycine max
Glyma.17G009200 Glycine max
Gohir.A03G124000 Gossypium hirsutum
Gohir.A05G173500 Gossypium hirsutum
Gohir.A05G310000 Gossypium hirsutum
Gohir.A06G152600 Gossypium hirsutum
Gohir.A07G050000 Gossypium hirsutum
Gohir.A11G152200 Gossypium hirsutum
Gohir.D02G146400 Gossypium hirsutum
Gohir.D05G176500 Gossypium hirsutum
Gohir.D05G310900 Gossypium hirsutum
Gohir.D06G159000 Gossypium hirsutum
Gohir.D07G054300 Gossypium hirsutum
Gohir.D11G159000 Gossypium hirsutum
Gorai.001G057500 Gossypium raimondii
Gorai.005G163900 Gossypium raimondii
Gorai.007G169500 Gossypium raimondii
Gorai.009G181900 Gossypium raimondii
Gorai.009G331800 Gossypium raimondii
Gorai.010G185700 Gossypium raimondii
GSVIVG01007239001 Vitis vinifera
GSVIVG01008571001 Vitis vinifera
HanXRQChr04g0126821 Helianthus annuus
HanXRQChr10g0306251 Helianthus annuus
HanXRQChr12g0361361 Helianthus annuus
HanXRQChr12g0373731 Helianthus annuus
HanXRQChr15g0470041 Helianthus annuus
Haze_06900 Corylus avellana
Haze_12448 Corylus avellana
Haze_12751 Corylus avellana
Hma1.2p1_0065F.1_g035080 Hydrangea macrophylla
Hma1.2p1_0298F.1_g117270 Hydrangea macrophylla
Hma1.2p1_0405F.1_g145570 Hydrangea macrophylla
Hma1.2p1_2406F.1_g321480 Hydrangea macrophylla
HPP92_000206 Vanilla planifolia
HPP92_000222 Vanilla planifolia
HPP92_004750 Vanilla planifolia
HPP92_006273 Vanilla planifolia
HPP92_008061 Vanilla planifolia
Lalb_Chr15g0087901 Lupinus albus
Lalb_Chr18g0056891 Lupinus albus
Lalb_Chr20g0119161 Lupinus albus
Lj4g0021228 Lotus japonicus
Lj6g0027371 Lotus japonicus
Lj6P830T23 Lonicera japonica
Lsat_1_v5_gn_5_123300 Lactuca sativa
Lsat_1_v5_gn_7_13381 Lactuca sativa
Lsat_1_v5_gn_7_94860 Lactuca sativa
Manes.06G121300 Manihot esculenta
Manes.12G008400 Manihot esculenta
Manes.12G058200 Manihot esculenta
Manes.13G008900 Manihot esculenta
MBI07_g21929_MAGBIO Magnolia biondii
MBI11_g05334_MAGBIO Magnolia biondii
MBI19_g29448_MAGBIO Magnolia biondii
MD05G1113800 Malus domestica
MD05G1356500 Malus domestica
MD09G1116300 Malus domestica
MD10G1329600 Malus domestica
MD13G1122500 Malus domestica
MD16G1123000 Malus domestica
MD17G1108000 Malus domestica
Medtr2g025410 Medicago truncatula
Medtr4g132880 Medicago truncatula
Medtr6g453350 Medicago truncatula
MELO3C007428.2 Cucumis melo
MELO3C017745.2 Cucumis melo
MELO3C021703.2 Cucumis melo
MELO3C022326.2 Cucumis melo
Migut.K01004 Erythranthe guttata
Migut.M01381 Erythranthe guttata
MSTRG.483 Avicennia marina
MSTRG.7175 Avicennia marina
MSTRG.8022 Avicennia marina
Nitab4.5_0000143g0420 Nicotiana tabacum
Nitab4.5_0000251g0040 Nicotiana tabacum
Nitab4.5_0001198g0150 Nicotiana tabacum
Nitab4.5_0008006g0070 Nicotiana tabacum
Nitab4.5_0018980g0010 Nicotiana tabacum
Nn1g03351 Nelumbo nucifera
Nn1g03741 Nelumbo nucifera
Nn1g07328 Nelumbo nucifera
Nn2g12184 Nelumbo nucifera
Nn2g13510 Nelumbo nucifera
Nn3g16399 Nelumbo nucifera
Nn3g18867 Nelumbo nucifera
Nn3g18868 Nelumbo nucifera
Nn4g22258 Nelumbo nucifera
Nn6g33367 Nelumbo nucifera
Oeu003171.1 Olea europaea
Oeu011355.1 Olea europaea
Oeu026514.1 Olea europaea
Oeu049725.1 Olea europaea
Os02g0507600 Oryza sativa ssp. japonica
Os04g0294401 Oryza sativa ssp. japonica
Os04g0669475 Oryza sativa ssp. japonica
Os11g0490300 Oryza sativa ssp. japonica
Peaxi162Scf00442g00052 Petunia axillaris
Peaxi162Scf00558g00021 Petunia axillaris
Peaxi162Scf00990g10013 Petunia axillaris
PGR042G2503 Punica granatum
PGR042G3865 Punica granatum
PGR102G0728 Punica granatum
PGR119G1262 Punica granatum
PGSC0003DMG400013338 Solanum tuberosum
PGSC0003DMG400017004 Solanum tuberosum
PGSC0003DMG400023561 Solanum tuberosum
Phvul.003G082900 Phaseolus vulgaris
Phvul.006G144100 Phaseolus vulgaris
Potri.001G059400 Populus trichocarpa
Potri.003G168500 Populus trichocarpa
Potri.004G001800 Populus trichocarpa
Potri.011G022900 Populus trichocarpa
Potri.012G101200 Populus trichocarpa
Potri.015G099400 Populus trichocarpa
Prupe.1G222700 Prunus persica
Prupe.3G208400 Prunus persica
Prupe.4G012500 Prunus persica
Prupe.6G184300 Prunus persica
Psat1g177200 Pisum sativum
Psat4g003520 Pisum sativum
PSO017G5479 Papaver somniferum
PSO017G7172 Papaver somniferum
PSO210G4865 Papaver somniferum
PSO478G2236 Papaver somniferum
PSO478G2859 Papaver somniferum
PSO832G0371 Papaver somniferum
QL03p008463 Quercus lobata
QL03p051693 Quercus lobata
QL08p030048 Quercus lobata
QL08p061499 Quercus lobata
QL10p003470 Quercus lobata
RcHm_v2.0_Chr2g0157771 Rosa chinensis
RcHm_v2.0_Chr4g0429791 Rosa chinensis
RcHm_v2.0_Chr5g0001691 Rosa chinensis
Rhsim02G0104000 Rhododendron simsii
Rhsim06G0169500 Rhododendron simsii
Rhsim12G0023900 Rhododendron simsii
Rhsim13G0148000 Rhododendron simsii
Sabra03G0123500 Salix brachista
Sabra11G0013900 Salix brachista
Sabra12G0074300 Salix brachista
SalBow2G0772 Salvia bowleyana
SalBow8G3831 Salvia bowleyana
Sc04g0010300 Simmondsia chinensis
Sc05g0009560 Simmondsia chinensis
Sc17g0007670 Simmondsia chinensis
Sed0007035 Sechium edule
Sed0009653 Sechium edule
Sed0018138 Sechium edule
Sed0020687 Sechium edule
Sed0021259 Sechium edule
Sed0022678 Sechium edule
SEGI_14535 Sequoiadendron giganteum
SEGI_22136 Sequoiadendron giganteum
SGA_v2.0_scaffold4G01887 Striga asiatica
SGA_v2.0_scaffold7G03772 Striga asiatica
SHI17986 Sapria himalayana
Solyc11g012060.2 Solanum lycopersicum
Sopen04g006800 Solanum pennellii
Sopen11g006850 Solanum pennellii
Sp1g10690 Schrenkiella parvula
Sp1g23490 Schrenkiella parvula
Sp2g02190 Schrenkiella parvula
Sp6g30890 Schrenkiella parvula
TAR622G1418 Trochodendron aralioides
TAR624G0820 Trochodendron aralioides
TAR626G0321 Trochodendron aralioides
TAR627G0807 Trochodendron aralioides
TAR629G1140 Trochodendron aralioides
TAR629G1206 Trochodendron aralioides
THA.LOC104810685 Tarenaya hassleriana
THA.LOC104816117 Tarenaya hassleriana
THA.LOC104818580 Tarenaya hassleriana
THA.LOC104823538 Tarenaya hassleriana
THA.LOC104825487 Tarenaya hassleriana
Thecc.01G184200 Theobroma cacao
Thecc.02G201600 Theobroma cacao
Thecc.03G132300 Theobroma cacao
Thecc.06G231400 Theobroma cacao
Thhalv10009976m.g Eutrema salsugineum
Thhalv10010010m.g Eutrema salsugineum
Thhalv10015811m.g Eutrema salsugineum
Thhalv10024108m.g Eutrema salsugineum
TPR.G37073 Trifolium pratense
TWI36G0632 Tripterygium wilfordii
TWI36G1521 Tripterygium wilfordii
TWI38G1020 Tripterygium wilfordii
TWI38G2307 Tripterygium wilfordii
TWI63G1105 Tripterygium wilfordii
TWI75G1221 Tripterygium wilfordii
unitig_32.g11541 Utricularia gibba
unitig_37.g12162 Utricularia gibba
unitig_748.g7596 Utricularia gibba
unitig_92.g28108 Utricularia gibba
vmacro12147 Vaccinium macrocarpon
vmacro15778 Vaccinium macrocarpon
VMungo0540G2178 Vigna mungo
VMungo1215G2321 Vigna mungo
Zm00001eb066870 Zea mays
Zm00001eb169490 Zea mays
Zm00001eb180930 Zea mays
Zm00001eb433250 Zea mays

User provided reference genes

Program Settings