Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p18770 Brassica napus
A06p14300 Brassica napus
A07p29770 Brassica napus
A07p39440 Brassica napus
A07p39450 Brassica napus
A08p30480 Brassica napus
A09p15950 Brassica napus
A09p60010 Brassica napus
A09p60020 Brassica napus
A09p60030 Brassica napus
Aa31LG2G330 Aethionema arabicum
Aa31LG4G3760 Aethionema arabicum
Aa31LG7G2810 Aethionema arabicum
Actinidia02098 Actinidia chinensis
Actinidia05177 Actinidia chinensis
Actinidia14453 Actinidia chinensis
Actinidia27437 Actinidia chinensis
Ah.02g117200 Amaranthus hybridus
Ah.02g117210 Amaranthus hybridus
Ah.12g056240 Amaranthus hybridus
AL1G30660 Arabidopsis lyrata
AL2G13000 Arabidopsis lyrata
AL2G33300 Arabidopsis lyrata
AL2G33310 Arabidopsis lyrata
Aqoxy1G00383 Aquilegia oxysepala
Aqoxy7G00686 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AVQ9QZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F7W7FE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IMEV7C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QHK75C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R4XYVX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XS8ZHY Arachis hypogaea
AT1G18280 Arabidopsis thaliana
AT1G62790 Arabidopsis thaliana
AT1G73550 Arabidopsis thaliana
AT1G73560 Arabidopsis thaliana
ATR0665G142 Amborella trichopoda
ATR0691G066 Amborella trichopoda
Atru.chr9.1400 Acer truncatum
Atru.chr9.1668 Acer truncatum
AUR62007456 Chenopodium quinoa
AUR62007457 Chenopodium quinoa
AUR62017473 Chenopodium quinoa
AUR62027274 Chenopodium quinoa
AUR62027275 Chenopodium quinoa
AUR62027276 Chenopodium quinoa
BcaB03g12971 Brassica carinata
BcaB03g15061 Brassica carinata
BcaB03g15718 Brassica carinata
BcaB07g31360 Brassica carinata
BcaC02g10422 Brassica carinata
BcaC04g22449 Brassica carinata
BcaC05g25722 Brassica carinata
BcaC06g31912 Brassica carinata
BcaC07g38899 Brassica carinata
BcaC07g41337 Brassica carinata
BcaC07g41338 Brassica carinata
BcaC08g45637 Brassica carinata
BcaC08g46774 Brassica carinata
BcaC08g46776 Brassica carinata
BcaNung05438 Brassica carinata
BolC2t09161H Brassica oleracea
BolC5t30353H Brassica oleracea
BolC6t38512H Brassica oleracea
BolC6t39804H Brassica oleracea
BolC6t39805H Brassica oleracea
BolC8t49481H Brassica oleracea
BolC8t51894H Brassica oleracea
BolC8t51896H Brassica oleracea
BolC9t54829H Brassica oleracea
BraA02t06920Z Brassica rapa
BraA06t24559Z Brassica rapa
BraA07t30615Z Brassica rapa
BraA07t31493Z Brassica rapa
BraA07t31494Z Brassica rapa
BraA08t34980Z Brassica rapa
BraA09t37231Z Brassica rapa
BraA09t41371Z Brassica rapa
BraA09t41373Z Brassica rapa
C02p31180 Brassica napus
C05p16560 Brassica napus
C06p33980 Brassica napus
C06p47670 Brassica napus
C08p18490 Brassica napus
C08p43460 Brassica napus
C08p43490 Brassica napus
C08p43500 Brassica napus
C09p19210 Brassica napus
CAN.G1394.32 Capsicum annuum
CAN.G843.45 Capsicum annuum
CANSAT21G1007 Cannabis sativa
CARHR018840 Cardamine hirsuta
CARHR049050 Cardamine hirsuta
CARHR066570 Cardamine hirsuta
CARHR066580 Cardamine hirsuta
Carub.0001s1790 Capsella rubella
Carub.0002s0219 Capsella rubella
Carub.0002s2029 Capsella rubella
Carub.0002s2030 Capsella rubella
Ca_12296_v3 Cicer arietinum L.
Cc08_g13090 Coffea canephora
CDE12G0419 Ceratophyllum demersum
Cfa012784 Carpinus fangiana
Cfa019634 Carpinus fangiana
Cfa019635 Carpinus fangiana
Ciclev10022260m.g Citrus clementina
CiPaw.11G149500 Carya illinoinensis
CiPaw.15G144700 Carya illinoinensis
ClCG04G010550 Citrullus lanatus
ClCG10G003060 Citrullus lanatus
COL.COLO4_23894 Corchorus olitorius
COL.COLO4_28890 Corchorus olitorius
Cpa.g.sc29.112 Carica papaya
CsaV3_1G007240 Cucumis sativus L.
CsaV3_3G003100 Cucumis sativus L.
CSS0005696 Camellia sinensis var. sinensis
DCAR_004911 Daucus carota
DCAR_006808 Daucus carota
DCAR_006809 Daucus carota
DCAR_008459 Daucus carota
DCAR_015011 Daucus carota
DCAR_027807 Daucus carota
DCAR_027810 Daucus carota
DCAR_027811 Daucus carota
DCAR_027812 Daucus carota
Dinv09298 Davidia involucrata
Dinv21043 Davidia involucrata
Dinv21047 Davidia involucrata
Dinv21585 Davidia involucrata
Dinv41669 Davidia involucrata
Dinv41673 Davidia involucrata
Duzib068G0912 Durio zibethinus
Duzib068G1400 Durio zibethinus
Duzib084G1282 Durio zibethinus
Duzib205G0294 Durio zibethinus
Duzib205G1498 Durio zibethinus
ECA233G2544 Erigeron canadensis
EL10Ac5g12987 Beta vulgaris
EL10Ac5g12988 Beta vulgaris
EL10Ac5g12989 Beta vulgaris
EL10Ac5g12990 Beta vulgaris
EL10Ac5g12991 Beta vulgaris
EL10Ac6g13897 Beta vulgaris
Eucgr.D02016 Eucalyptus grandis
Eucgr.E00466 Eucalyptus grandis
Eucgr.H00534 Eucalyptus grandis
FAN01G1591 Fragaria x ananassa
FAN06G4937 Fragaria x ananassa
FAN08G1163 Fragaria x ananassa
FAN08G3598 Fragaria x ananassa
FAN11G0461 Fragaria x ananassa
FAN13G1983 Fragaria x ananassa
FAN13G2653 Fragaria x ananassa
FAN16G2664 Fragaria x ananassa
FAN18G0727 Fragaria x ananassa
FAN18G4182 Fragaria x ananassa
FvH4_3g18850 Fragaria vesca
FvH4_5g00460 Fragaria vesca
FvH4_5g17510 Fragaria vesca
FvH4_7g32070 Fragaria vesca
Glyma.05G055100 Glycine max
Glyma.07G103300 Glycine max
Glyma.09G174300 Glycine max
Glyma.11G030300 Glycine max
Glyma.17G137300 Glycine max
Gohir.A03G014000 Gossypium hirsutum
Gohir.A03G014100 Gossypium hirsutum
Gohir.A03G014200 Gossypium hirsutum
Gohir.A03G014300 Gossypium hirsutum
Gohir.A08G172900 Gossypium hirsutum
Gohir.A11G020100 Gossypium hirsutum
Gohir.A12G220350 Gossypium hirsutum
Gohir.D03G159900 Gossypium hirsutum
Gohir.D03G160000 Gossypium hirsutum
Gohir.D03G160100 Gossypium hirsutum
Gohir.D08G191700 Gossypium hirsutum
Gohir.D11G019800 Gossypium hirsutum
Gohir.D12G222650 Gossypium hirsutum
Gorai.003G168200 Gossypium raimondii
Gorai.003G168300 Gossypium raimondii
Gorai.003G168500 Gossypium raimondii
Gorai.003G168600 Gossypium raimondii
Gorai.004G201700 Gossypium raimondii
Gorai.007G021100 Gossypium raimondii
Gorai.008G238700 Gossypium raimondii
HanXRQChr02g0049661 Helianthus annuus
HanXRQChr13g0393201 Helianthus annuus
Haze_08591 Corylus avellana
Haze_08594 Corylus avellana
Haze_18887 Corylus avellana
Haze_27720 Corylus avellana
Hma1.2p1_1868F.1_g305930 Hydrangea macrophylla
HPP92_005350 Vanilla planifolia
HPP92_015060 Vanilla planifolia
Hund11572 Selenicereus undatus
Hund28379 Selenicereus undatus
Hund28380 Selenicereus undatus
Lalb_Chr05g0214611 Lupinus albus
Lalb_Chr09g0324471 Lupinus albus
Lalb_Chr14g0370631 Lupinus albus
Lalb_Chr16g0389531 Lupinus albus
Lalb_Chr24g0398151 Lupinus albus
Lj2g0011219 Lotus japonicus
Lj2g0017697 Lotus japonicus
Lj2P210T45 Lonicera japonica
Lj4g0000999 Lotus japonicus
Lsat_1_v5_gn_6_2261 Lactuca sativa
Manes.01G074600 Manihot esculenta
Manes.02G034500 Manihot esculenta
Manes.06G004400 Manihot esculenta
MBI04_g32269_MAGBIO Magnolia biondii
MBI04_g44361_MAGBIO Magnolia biondii
MBI04_g47312_MAGBIO Magnolia biondii
MBI12_g20401_MAGBIO Magnolia biondii
MBI19_g01033_MAGBIO Magnolia biondii
MD04G1081000 Malus domestica
MD06G1064500 Malus domestica
MD06G1228500 Malus domestica
MD14G1237700 Malus domestica
Medtr4g101780 Medicago truncatula
Medtr5g011950 Medicago truncatula
Medtr5g011960 Medicago truncatula
Medtr5g011980 Medicago truncatula
Medtr6g069860 Medicago truncatula
MELO3C002141.2 Cucumis melo
MELO3C013976.2 Cucumis melo
Migut.D01310 Erythranthe guttata
Migut.E00883 Erythranthe guttata
Migut.E01691 Erythranthe guttata
MSTRG.13784 Avicennia marina
MSTRG.1938 Avicennia marina
Nitab4.5_0001264g0090 Nicotiana tabacum
Nitab4.5_0001707g0060 Nicotiana tabacum
Nitab4.5_0001816g0220 Nicotiana tabacum
Nitab4.5_0002046g0010 Nicotiana tabacum
Nitab4.5_0004482g0010 Nicotiana tabacum
Nitab4.5_0010189g0010 Nicotiana tabacum
Nn1g01118 Nelumbo nucifera
Nn3g18320 Nelumbo nucifera
Nn4g24296 Nelumbo nucifera
Nn4g26341 Nelumbo nucifera
Nn4g26343 Nelumbo nucifera
Nn5g27957 Nelumbo nucifera
Oeu016519.1 Olea europaea
Oeu024311.1 Olea europaea
Os06g0686400 Oryza sativa ssp. japonica
Os06g0711900 Oryza sativa ssp. japonica
Os10g0191100 Oryza sativa ssp. japonica
Peaxi162Scf00002g00311 Petunia axillaris
Peaxi162Scf00051g00001 Petunia axillaris
Peaxi162Scf00102g01140 Petunia axillaris
Peaxi162Scf00131g00142 Petunia axillaris
Peaxi162Scf00314g00327 Petunia axillaris
Peaxi162Scf00319g00511 Petunia axillaris
Peaxi162Scf63006g00001 Petunia axillaris
PGR031G3039 Punica granatum
PGR042G3218 Punica granatum
PGR044G0327 Punica granatum
PGR083G1638 Punica granatum
PGSC0003DMG400004782 Solanum tuberosum
PGSC0003DMG400005678 Solanum tuberosum
PGSC0003DMG400012481 Solanum tuberosum
PGSC0003DMG400031724 Solanum tuberosum
PGSC0003DMG400043645 Solanum tuberosum
Phvul.002G060600 Phaseolus vulgaris
Phvul.003G217100 Phaseolus vulgaris
Phvul.004G149600 Phaseolus vulgaris
Potri.001G119000 Populus trichocarpa
Potri.003G113900 Populus trichocarpa
Potri.015G036201 Populus trichocarpa
Prupe.5G077100 Prunus persica
Prupe.5G235000 Prunus persica
Psat0s5204g0040 Pisum sativum
Psat1g030280 Pisum sativum
Psat2g179160 Pisum sativum
Psat2g179200 Pisum sativum
Psat4g069400 Pisum sativum
PSO017G0598 Papaver somniferum
PSO478G1109 Papaver somniferum
PSO478G3783 Papaver somniferum
PSO782G3337 Papaver somniferum
QL10p030735 Quercus lobata
QL10p030769 Quercus lobata
QL10p030783 Quercus lobata
QL10p030872 Quercus lobata
QL10p030894 Quercus lobata
QL12p014213 Quercus lobata
RcHm_v2.0_Chr5g0031711 Rosa chinensis
RcHm_v2.0_Chr7g0178151 Rosa chinensis
RcHm_v2.0_Chr7g0202051 Rosa chinensis
Rhsim07G0103200 Rhododendron simsii
Rhsim07G0103400 Rhododendron simsii
Rhsim07G0103500 Rhododendron simsii
Rhsim10G0211900 Rhododendron simsii
Sabra01G0091900 Salix brachista
Sabra03G0079000 Salix brachista
Sabra15G0029700 Salix brachista
SalBow1G4970 Salvia bowleyana
Sc01g0009260 Simmondsia chinensis
Sc06g0007360 Simmondsia chinensis
Sc07g0009400 Simmondsia chinensis
Sc12g0008010 Simmondsia chinensis
Sc22g0000640 Simmondsia chinensis
Sed0003966 Sechium edule
Sed0011794 Sechium edule
Sed0019297 Sechium edule
SEGI_06211 Sequoiadendron giganteum
SEGI_10227 Sequoiadendron giganteum
SEGI_26014 Sequoiadendron giganteum
SEGI_27715 Sequoiadendron giganteum
SEGI_28568 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35993 Striga asiatica
SGA_v2.0_scaffold196G40941 Striga asiatica
Solyc03g118580.3 Solanum lycopersicum
Solyc08g007460.3 Solanum lycopersicum
Solyc08g079250.4 Solanum lycopersicum
Sopen03g037530 Solanum pennellii
Sopen08g003420 Solanum pennellii
Sopen08g027690 Solanum pennellii
Sopen08g027700 Solanum pennellii
Sp1g16250 Schrenkiella parvula
Sp2g01820 Schrenkiella parvula
Sp5g28710 Schrenkiella parvula
Sp5g28720 Schrenkiella parvula
TAR622G1257 Trochodendron aralioides
TAR629G0091 Trochodendron aralioides
TAR629G2117 Trochodendron aralioides
TAR636G2404 Trochodendron aralioides
THA.LOC104809448 Tarenaya hassleriana
THA.LOC104812172 Tarenaya hassleriana
THA.LOC104813928 Tarenaya hassleriana
Thecc.03G059100 Theobroma cacao
Thecc.03G259300 Theobroma cacao
Thhalv10008878m.g Eutrema salsugineum
Thhalv10019626m.g Eutrema salsugineum
Thhalv10019793m.g Eutrema salsugineum
Thhalv10023739m.g Eutrema salsugineum
TPR.G19689 Trifolium pratense
TPR.G19708 Trifolium pratense
TPR.G37687 Trifolium pratense
TPR.G8623 Trifolium pratense
TWI15G0199 Tripterygium wilfordii
TWI60G0794 Tripterygium wilfordii
TWI81G0445 Tripterygium wilfordii
unitig_52.g17501 Utricularia gibba
vmacro00229 Vaccinium macrocarpon
VMungo0251G1333 Vigna mungo
VMungo0464G0752 Vigna mungo
VMungo1215G0826 Vigna mungo
Zm00001eb183260 Zea mays
Zm00001eb225620 Zea mays
Zm00001eb227760 Zea mays
Zm00001eb273530 Zea mays

User provided reference genes

Program Settings