Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03470 Brassica napus
A03p63280 Brassica napus
A06p16600 Brassica napus
A07p15580 Brassica napus
A08p16370 Brassica napus
A08p29320 Brassica napus
Aa31LG2G15410 Aethionema arabicum
Aa31LG7G4850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.4046 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1984 Anthoceros agrestis
Actinidia15495 Actinidia chinensis
Actinidia15496 Actinidia chinensis
Actinidia15497 Actinidia chinensis
Actinidia17045 Actinidia chinensis
Actinidia17046 Actinidia chinensis
Actinidia17374 Actinidia chinensis
Actinidia22906 Actinidia chinensis
Actinidia28605 Actinidia chinensis
Actinidia37916 Actinidia chinensis
Ah.00g000870 Amaranthus hybridus
Ah.00g000890 Amaranthus hybridus
AL1G33580 Arabidopsis lyrata
AL1G33590 Arabidopsis lyrata
AL7G16130 Arabidopsis lyrata
Aqoxy5G01026 Aquilegia oxysepala
Aqoxy6G01682 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1HU4YV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RQ5XX8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TYLU08 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VUY3N3 Arachis hypogaea
AT1G20620 Arabidopsis thaliana
AT1G20630 Arabidopsis thaliana
AT4G35090 Arabidopsis thaliana
ATR0661G135 Amborella trichopoda
ATR0661G170 Amborella trichopoda
Atru.chr13.146 Acer truncatum
Atru.chr13.148 Acer truncatum
Atru.chr13.149 Acer truncatum
AUR62029996 Chenopodium quinoa
AUR62036848 Chenopodium quinoa
AUR62036854 Chenopodium quinoa
AUR62040804 Chenopodium quinoa
AUR62040809 Chenopodium quinoa
BcaB03g11791 Brassica carinata
BcaB03g12861 Brassica carinata
BcaB03g14310 Brassica carinata
BcaB03g14311 Brassica carinata
BcaB04g17492 Brassica carinata
BcaB07g32059 Brassica carinata
BcaB07g32060 Brassica carinata
BcaC01g00849 Brassica carinata
BcaC02g10252 Brassica carinata
BcaC05g25968 Brassica carinata
BcaC05g25971 Brassica carinata
BcaC06g34824 Brassica carinata
BcaC06g34825 Brassica carinata
BcaC07g39043 Brassica carinata
BcaC09g49151 Brassica carinata
BcaNung00630 Brassica carinata
BcaNung02371 Brassica carinata
BcaNung02372 Brassica carinata
BcaNung04620 Brassica carinata
BolC1t00369H Brassica oleracea
BolC1t04168H Brassica oleracea
BolC3t20807H Brassica oleracea
BolC4t24645H Brassica oleracea
BolC5t30624H Brassica oleracea
BolC5t30626H Brassica oleracea
BolC7t42832H Brassica oleracea
BolC7t46518H Brassica oleracea
BolC8t49654H Brassica oleracea
BraA01t00333Z Brassica rapa
BraA03t15406Z Brassica rapa
BraA06t24767Z Brassica rapa
BraA06t24768Z Brassica rapa
BraA07t29296Z Brassica rapa
BraA07t29297Z Brassica rapa
BraA08t33605Z Brassica rapa
BraA08t34867Z Brassica rapa
C01p03770 Brassica napus
C03p85180 Brassica napus
C04p31080 Brassica napus
C05p19240 Brassica napus
C07p22800 Brassica napus
C07p22930 Brassica napus
C07p60920 Brassica napus
C08p20260 Brassica napus
CAN.G1238.1 Capsicum annuum
CAN.G208.23 Capsicum annuum
CAN.G208.25 Capsicum annuum
CAN.G311.123 Capsicum annuum
CAN.G991.5 Capsicum annuum
CANSAT25G0375 Cannabis sativa
CANSAT25G3397 Cannabis sativa
CANSAT80G1913 Cannabis sativa
CARHR021080 Cardamine hirsuta
CARHR021090 Cardamine hirsuta
CARHR243370 Cardamine hirsuta
Carub.0001s2009 Capsella rubella
Carub.0001s2010 Capsella rubella
Carub.0007s0522 Capsella rubella
Ca_15430_v3 Cicer arietinum L.
CBR_g4843 Chara braunii
Cc00_g33810 Coffea canephora
Cc06_g18010 Coffea canephora
Cc07_g11710 Coffea canephora
Cc07_g11720 Coffea canephora
Cc10_g00570 Coffea canephora
Cc10_g00580 Coffea canephora
CDE01G0348 Ceratophyllum demersum
CDE02G1257 Ceratophyllum demersum
CDE02G3563 Ceratophyllum demersum
CDE04G0195 Ceratophyllum demersum
Cfa022678 Carpinus fangiana
Ciclev10000948m.g Citrus clementina
Ciclev10000951m.g Citrus clementina
CiPaw.07G137800 Carya illinoinensis
CiPaw.07G138000 Carya illinoinensis
CiPaw.08G074000 Carya illinoinensis
ClCG08G009360 Citrullus lanatus
ClCG11G018720 Citrullus lanatus
COL.COLO4_22543 Corchorus olitorius
COL.COLO4_36390 Corchorus olitorius
Cpa.g.sc26.187 Carica papaya
Cpa.g.sc6.340 Carica papaya
Cpa.g.sc75.61 Carica papaya
Cre09.g417150 Chlamydomonas reinhardtii
CsaV3_4G037250 Cucumis sativus L.
CsaV3_4G037260 Cucumis sativus L.
CsaV3_6G031490 Cucumis sativus L.
CSS0008505 Camellia sinensis var. sinensis
CSS0009462 Camellia sinensis var. sinensis
CSS0017412 Camellia sinensis var. sinensis
CSS0035291 Camellia sinensis var. sinensis
CSS0040073 Camellia sinensis var. sinensis
DCAR_009536 Daucus carota
DCAR_013924 Daucus carota
DCAR_013925 Daucus carota
DCAR_016776 Daucus carota
DCAR_016777 Daucus carota
DCAR_022934 Daucus carota
Dinv08174 Davidia involucrata
Dinv31952 Davidia involucrata
Dinv40178 Davidia involucrata
Duzib093G0259 Durio zibethinus
Duzib116G0404 Durio zibethinus
Duzib147G0111 Durio zibethinus
ECA233G3061 Erigeron canadensis
ECA233G5066 Erigeron canadensis
EL10Ac1g01943 Beta vulgaris
EL10Ac1g01946 Beta vulgaris
EL10Ac7g17741 Beta vulgaris
Eucgr.F01775 Eucalyptus grandis
Eucgr.F01776 Eucalyptus grandis
Eucgr.F01777 Eucalyptus grandis
Eucgr.F03557 Eucalyptus grandis
Eucgr.F03561 Eucalyptus grandis
Eucgr.L01419 Eucalyptus grandis
FAN04G0344 Fragaria x ananassa
FAN08G2133 Fragaria x ananassa
FAN13G3059 Fragaria x ananassa
FAN18G1576 Fragaria x ananassa
FvH4_5g25260 Fragaria vesca
Glyma.04G017500 Glycine max
Glyma.06G017900 Glycine max
Glyma.14G223500 Glycine max
Glyma.17G261700 Glycine max
Gohir.A01G105000 Gossypium hirsutum
Gohir.A02G177300 Gossypium hirsutum
Gohir.A05G179100 Gossypium hirsutum
Gohir.A07G170956 Gossypium hirsutum
Gohir.D01G090200 Gossypium hirsutum
Gohir.D03G002600 Gossypium hirsutum
Gohir.D05G182300 Gossypium hirsutum
Gohir.D07G177666 Gossypium hirsutum
Gorai.001G198700 Gossypium raimondii
Gorai.002G115900 Gossypium raimondii
Gorai.003G002800 Gossypium raimondii
Gorai.009G187600 Gossypium raimondii
GSVIVG01002361001 Vitis vinifera
GSVIVG01002362001 Vitis vinifera
GSVIVG01013367001 Vitis vinifera
GSVIVG01013369001 Vitis vinifera
GSVIVG01026654001 Vitis vinifera
GSVIVG01026655001 Vitis vinifera
HanXRQChr04g0096431 Helianthus annuus
HanXRQChr08g0216431 Helianthus annuus
HanXRQChr08g0216441 Helianthus annuus
HanXRQChr12g0366381 Helianthus annuus
HanXRQChr12g0367681 Helianthus annuus
HanXRQChr12g0367721 Helianthus annuus
HanXRQChr14g0427441 Helianthus annuus
Haze_22790 Corylus avellana
Haze_22799 Corylus avellana
Haze_27083 Corylus avellana
Haze_27148 Corylus avellana
Hma1.2p1_3194F.1_g333850 Hydrangea macrophylla
HPP92_014557 Vanilla planifolia
HPP92_020866 Vanilla planifolia
HPP92_020991 Vanilla planifolia
HPP92_021044 Vanilla planifolia
HPP92_021045 Vanilla planifolia
HPP92_028123 Vanilla planifolia
Hund01766 Selenicereus undatus
Hund05098 Selenicereus undatus
Hund15075 Selenicereus undatus
Lalb_Chr08g0246431 Lupinus albus
Lalb_Chr11g0061591 Lupinus albus
Lalb_Chr19g0131761 Lupinus albus
Lj1g0002248 Lotus japonicus
Lj2A497T43 Lonicera japonica
Lj4A10T81 Lonicera japonica
Lj4A806G77 Lonicera japonica
Lj4A806T78 Lonicera japonica
Lsat_1_v5_gn_8_26440 Lactuca sativa
Lsat_1_v5_gn_8_26460 Lactuca sativa
Manes.01G154400 Manihot esculenta
Manes.02G113300 Manihot esculenta
Manes.05G130500 Manihot esculenta
Manes.05G130700 Manihot esculenta
Manes.18G004400 Manihot esculenta
Manes.18G004500 Manihot esculenta
Mapoly0068s0055 Marchantia polymorpha
Mapoly0125s0005 Marchantia polymorpha
Mapoly0127s0052 Marchantia polymorpha
Mapoly0127s0054 Marchantia polymorpha
MBI05_g27154_MAGBIO Magnolia biondii
MBI08_g04813_MAGBIO Magnolia biondii
MD06G1008600 Malus domestica
MD06G1008700 Malus domestica
MD06G1009000 Malus domestica
Medtr1386s0010 Medicago truncatula
Medtr3g115370 Medicago truncatula
MELO3C017023.2 Cucumis melo
MELO3C017024.2 Cucumis melo
MELO3C026532.2 Cucumis melo
Migut.C00389 Erythranthe guttata
Migut.N02962 Erythranthe guttata
MSTRG.22099 Avicennia marina
MSTRG.22101 Avicennia marina
MSTRG.981 Avicennia marina
Nitab4.5_0000407g0130 Nicotiana tabacum
Nitab4.5_0000588g0030 Nicotiana tabacum
Nitab4.5_0000702g0130 Nicotiana tabacum
Nitab4.5_0006960g0010 Nicotiana tabacum
Nitab4.5_0009395g0030 Nicotiana tabacum
Nitab4.5_0009821g0010 Nicotiana tabacum
Nitab4.5_0011405g0020 Nicotiana tabacum
Nn5g30964 Nelumbo nucifera
Nn6g31717 Nelumbo nucifera
Oeu022016.1 Olea europaea
Oeu029238.1 Olea europaea
Oeu033834.2 Olea europaea
Oeu042488.1 Olea europaea
Os02g0115700 Oryza sativa ssp. japonica
Os03g0131200 Oryza sativa ssp. japonica
Os06g0727200 Oryza sativa ssp. japonica
Peaxi162Scf00064g01212 Petunia axillaris
Peaxi162Scf00711g00410 Petunia axillaris
Peaxi162Scf01051g00002 Petunia axillaris
Peaxi162Scf01716g00006 Petunia axillaris
PGR031G1628 Punica granatum
PGR083G0511 Punica granatum
PGR083G1790 Punica granatum
PGSC0003DMG400001570 Solanum tuberosum
PGSC0003DMG400009906 Solanum tuberosum
PGSC0003DMG400029408 Solanum tuberosum
Phvul.001G001000 Phaseolus vulgaris
Phvul.009G011100 Phaseolus vulgaris
Potri.002G009800 Populus trichocarpa
Potri.005G100400 Populus trichocarpa
Potri.005G251600 Populus trichocarpa
Pp3c13_20000 Physcomitrium patens
Pp3c18_13590 Physcomitrium patens
Pp3c18_14590 Physcomitrium patens
Pp3c19_6540 Physcomitrium patens
Pp3c19_6580 Physcomitrium patens
Pp3c21_14650 Physcomitrium patens
Pp3c22_11690 Physcomitrium patens
Pp3c5_1060 Physcomitrium patens
Pp3s42_330 Physcomitrium patens
Prupe.5G011300 Prunus persica
Prupe.5G011400 Prunus persica
Psat0s498g0080 Pisum sativum
PSO210G2516 Papaver somniferum
PSO541G5108 Papaver somniferum
PSO675G4845 Papaver somniferum
PSO761G0236 Papaver somniferum
QL02p014419 Quercus lobata
QL02p014435 Quercus lobata
RcHm_v2.0_Chr7g0215401 Rosa chinensis
Rhsim06G0006600 Rhododendron simsii
Rhsim10G0197300 Rhododendron simsii
Rhsim10G0198600 Rhododendron simsii
Sabra02G0007200 Salix brachista
Sabra05G0083000 Salix brachista
SalBow6G5638 Salvia bowleyana
SalBow7G0281 Salvia bowleyana
Sc02g0009140 Simmondsia chinensis
Sc02g0009160 Simmondsia chinensis
Sed0002425 Sechium edule
Sed0003420 Sechium edule
Sed0008332 Sechium edule
Sed0020451 Sechium edule
SEGI_14536 Sequoiadendron giganteum
SGA_v2.0_scaffold364G49978 Striga asiatica
SMO141G0189 Selaginella moellendorffii
SMO199G0059 Selaginella moellendorffii
SMO199G0060 Selaginella moellendorffii
SMO361G0272 Selaginella moellendorffii
SMO361G0300 Selaginella moellendorffii
SMO361G0606 Selaginella moellendorffii
SMO364G0021 Selaginella moellendorffii
Solyc01g100630.3 Solanum lycopersicum
Solyc01g100640.4 Solanum lycopersicum
Solyc02g082760.3 Solanum lycopersicum
Solyc04g082460.4 Solanum lycopersicum
Solyc04g082475.1 Solanum lycopersicum
Solyc12g094620.3 Solanum lycopersicum
Sopen01g042980 Solanum pennellii
Sopen01g044140 Solanum pennellii
Sopen02g027520 Solanum pennellii
Sopen04g036070 Solanum pennellii
Sopen04g036090 Solanum pennellii
Sopen12g031520 Solanum pennellii
Sp1g18320 Schrenkiella parvula
Sp1g18330 Schrenkiella parvula
Sp7g32860 Schrenkiella parvula
TAR376G0232 Trochodendron aralioides
TAR376G0770 Trochodendron aralioides
TAR381G1045 Trochodendron aralioides
THA.LOC104801957 Tarenaya hassleriana
THA.LOC104806920 Tarenaya hassleriana
THA.LOC104809803 Tarenaya hassleriana
THA.LOC104811468 Tarenaya hassleriana
THA.LOC104811469 Tarenaya hassleriana
Thecc.01G006500 Theobroma cacao
Thecc.02G271400 Theobroma cacao
Thecc.08G060100 Theobroma cacao
Thhalv10007472m.g Eutrema salsugineum
Thhalv10007795m.g Eutrema salsugineum
Thhalv10024932m.g Eutrema salsugineum
TPR.G38117 Trifolium pratense
TWI36G0833 Tripterygium wilfordii
TWI56G1151 Tripterygium wilfordii
unitig_578.g16230 Utricularia gibba
vmacro04410 Vaccinium macrocarpon
vmacro12537 Vaccinium macrocarpon
vmacro20535 Vaccinium macrocarpon
VMungo0647G1158 Vigna mungo
VMungo1309G0874 Vigna mungo
Zm00001eb002510 Zea mays
Zm00001eb209570 Zea mays
Zm00001eb228570 Zea mays

User provided reference genes

Program Settings