Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12650 Brassica napus
A03p18100 Brassica napus
A05p01510 Brassica napus
A05p13090 Brassica napus
A06p08120 Brassica napus
A10p03640 Brassica napus
A10p03870 Brassica napus
A10p03910 Brassica napus
Aa31LG1G3250 Aethionema arabicum
Aa31LG5G4250 Aethionema arabicum
Aa31LG6G3330 Aethionema arabicum
Actinidia05542 Actinidia chinensis
Actinidia26955 Actinidia chinensis
Actinidia30502 Actinidia chinensis
Actinidia36907 Actinidia chinensis
Ah.01g014480 Amaranthus hybridus
Ah.09g237130 Amaranthus hybridus
AL1G15080 Arabidopsis lyrata
AL1G22610 Arabidopsis lyrata
AL4G27670 Arabidopsis lyrata
AL7G32810 Arabidopsis lyrata
Aqoxy4G02134 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.37V7UD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3MI1ZW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GRPF7N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IP8B32 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NPPN3F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WRD1HJ Arachis hypogaea
AT1G05291 Arabidopsis thaliana
AT1G11500 Arabidopsis thaliana
AT2G32280 Arabidopsis thaliana
AT4G21310 Arabidopsis thaliana
ATR1088G014 Amborella trichopoda
Atru.chr10.2042 Acer truncatum
Atru.chr2.3151 Acer truncatum
Atru.chr2.3155 Acer truncatum
Atru.chr6.3120 Acer truncatum
AUR62012579 Chenopodium quinoa
AUR62014622 Chenopodium quinoa
AUR62025135 Chenopodium quinoa
BcaB02g06871 Brassica carinata
BcaB02g06872 Brassica carinata
BcaB02g06873 Brassica carinata
BcaB02g06874 Brassica carinata
BcaB02g06875 Brassica carinata
BcaB02g10479 Brassica carinata
BcaB08g37397 Brassica carinata
BcaC01g05913 Brassica carinata
BcaC02g11336 Brassica carinata
BcaC02g12520 Brassica carinata
BcaC05g24402 Brassica carinata
BcaC05g24404 Brassica carinata
BcaC05g24405 Brassica carinata
BcaC05g24422 Brassica carinata
BcaC05g24431 Brassica carinata
BcaC05g25026 Brassica carinata
BcaC07g41776 Brassica carinata
BcaC07g41780 Brassica carinata
BcaC09g51236 Brassica carinata
BcaNung03827 Brassica carinata
BcaNung07113 Brassica carinata
BolC1t01475H Brassica oleracea
BolC4t21823H Brassica oleracea
BolC4t23285H Brassica oleracea
BolC5t29112H Brassica oleracea
BolC5t29134H Brassica oleracea
BolC5t29137H Brassica oleracea
BolC5t29711H Brassica oleracea
BolC8t52351H Brassica oleracea
BraA01t01208Z Brassica rapa
BraA03t11069Z Brassica rapa
BraA05t19147Z Brassica rapa
BraA05t20248Z Brassica rapa
BraA06t24011Z Brassica rapa
BraA09t41793Z Brassica rapa
BraA10t42661Z Brassica rapa
BraA10t42666Z Brassica rapa
C01p15240 Brassica napus
C03p21130 Brassica napus
C04p01710 Brassica napus
C04p17340 Brassica napus
C05p03340 Brassica napus
C05p03560 Brassica napus
C05p03580 Brassica napus
C05p09700 Brassica napus
C08p48180 Brassica napus
CAN.G424.101 Capsicum annuum
CAN.G80.5 Capsicum annuum
CAN.G86.23 Capsicum annuum
CANSAT56G1357 Cannabis sativa
CANSAT64G2082 Cannabis sativa
CARHR004780 Cardamine hirsuta
CARHR011780 Cardamine hirsuta
CARHR126090 Cardamine hirsuta
CARHR227880 Cardamine hirsuta
Carub.0001s0459 Capsella rubella
Carub.0001s1111 Capsella rubella
Carub.0004s1362 Capsella rubella
Carub.0007s2013 Capsella rubella
Ca_00209_v3 Cicer arietinum L.
Ca_01566_v3 Cicer arietinum L.
Cc02_g11780 Coffea canephora
Cc02_g11790 Coffea canephora
Cc02_g11800 Coffea canephora
Cc05_g05300 Coffea canephora
Cfa014458 Carpinus fangiana
Cfa014459 Carpinus fangiana
Cfa016406 Carpinus fangiana
Ciclev10010750m.g Citrus clementina
Ciclev10016802m.g Citrus clementina
Ciclev10018256m.g Citrus clementina
CiPaw.03G164100 Carya illinoinensis
CiPaw.09G080100 Carya illinoinensis
CiPaw.10G066500 Carya illinoinensis
ClCG01G022300 Citrullus lanatus
ClCG02G008330 Citrullus lanatus
ClCG03G005140 Citrullus lanatus
COL.COLO4_13023 Corchorus olitorius
COL.COLO4_31684 Corchorus olitorius
Cpa.g.sc8.252 Carica papaya
Cpa.g.sc81.6 Carica papaya
Cpa.g.sc97.87 Carica papaya
CsaV3_1G011340 Cucumis sativus L.
CsaV3_2G035290 Cucumis sativus L.
CsaV3_6G049430 Cucumis sativus L.
CSS0013632 Camellia sinensis var. sinensis
CSS0017368 Camellia sinensis var. sinensis
CSS0018308 Camellia sinensis var. sinensis
CSS0026437 Camellia sinensis var. sinensis
CSS0026942 Camellia sinensis var. sinensis
CSS0043908 Camellia sinensis var. sinensis
CSS0047257 Camellia sinensis var. sinensis
Dinv03948 Davidia involucrata
Dinv10902 Davidia involucrata
Dinv17854 Davidia involucrata
Duzib132G1271 Durio zibethinus
Duzib160G0639 Durio zibethinus
Duzib192G0838 Durio zibethinus
Duzib248G0344 Durio zibethinus
Duzib268G0542 Durio zibethinus
Duzib268G0562 Durio zibethinus
ECA236G2944 Erigeron canadensis
ECA246G1058 Erigeron canadensis
ECA248G2681 Erigeron canadensis
EL10Ac9g20650 Beta vulgaris
EL10As6g23700 Beta vulgaris
Eucgr.A01737 Eucalyptus grandis
Eucgr.A01738 Eucalyptus grandis
Eucgr.E03595 Eucalyptus grandis
Eucgr.F01002 Eucalyptus grandis
FAN02G1812 Fragaria x ananassa
FAN05G5371 Fragaria x ananassa
FAN09G1434 Fragaria x ananassa
FAN14G2170 Fragaria x ananassa
FAN21G0917 Fragaria x ananassa
FAN21G2583 Fragaria x ananassa
FAN25G2005 Fragaria x ananassa
FvH4_3g02950 Fragaria vesca
FvH4_6g43740 Fragaria vesca
Glyma.06G301800 Glycine max
Glyma.07G186800 Glycine max
Glyma.08G062400 Glycine max
Glyma.12G102600 Glycine max
Glyma.12G197000 Glycine max
Glyma.13G305100 Glycine max
Glyma.15G063500 Glycine max
Gohir.A01G073500 Gossypium hirsutum
Gohir.A10G016800 Gossypium hirsutum
Gohir.A10G016900 Gossypium hirsutum
Gohir.A12G135280 Gossypium hirsutum
Gohir.A13G058500 Gossypium hirsutum
Gohir.D01G060100 Gossypium hirsutum
Gohir.D10G016900 Gossypium hirsutum
Gohir.D10G017000 Gossypium hirsutum
Gohir.D12G139400 Gossypium hirsutum
Gohir.D13G063500 Gossypium hirsutum
Gorai.002G081500 Gossypium raimondii
Gorai.008G150400 Gossypium raimondii
Gorai.011G018800 Gossypium raimondii
Gorai.011G018900 Gossypium raimondii
Gorai.013G071900 Gossypium raimondii
GSVIVG01002747001 Vitis vinifera
GSVIVG01014579001 Vitis vinifera
GSVIVG01030648001 Vitis vinifera
HanXRQChr05g0130801 Helianthus annuus
HanXRQChr05g0139671 Helianthus annuus
HanXRQChr10g0295471 Helianthus annuus
Haze_06684 Corylus avellana
Haze_12961 Corylus avellana
Haze_12962 Corylus avellana
Hma1.2p1_0731F.1_g209940 Hydrangea macrophylla
Hma1.2p1_1682F.1_g297270 Hydrangea macrophylla
Hma1.2p1_2477F.1_g322890 Hydrangea macrophylla
HPP92_012333 Vanilla planifolia
HPP92_012379 Vanilla planifolia
Hund08070 Selenicereus undatus
Hund21316 Selenicereus undatus
Lalb_Chr01g0005501 Lupinus albus
Lalb_Chr03g0028961 Lupinus albus
Lalb_Chr14g0375611 Lupinus albus
Lalb_Chr16g0383251 Lupinus albus
Lalb_Chr20g0122631 Lupinus albus
Lj1A1222G63 Lonicera japonica
Lj1A753T61 Lonicera japonica
Lj3g0023668 Lotus japonicus
Lj3g0026531 Lotus japonicus
Lj4g0016895 Lotus japonicus
Lj6g0008162 Lotus japonicus
Lj8A121G26 Lonicera japonica
Lsat_1_v5_gn_1_125401 Lactuca sativa
Lsat_1_v5_gn_4_69180 Lactuca sativa
Manes.12G077300 Manihot esculenta
Manes.13G074501 Manihot esculenta
Manes.15G077800 Manihot esculenta
Manes.16G016700 Manihot esculenta
MBI02_g02474_MAGBIO Magnolia biondii
MD09G1103300 Malus domestica
MD10G1311300 Malus domestica
MD17G1091200 Malus domestica
Medtr2g010840 Medicago truncatula
Medtr2g089050 Medicago truncatula
Medtr4g045673 Medicago truncatula
Medtr4g092130 Medicago truncatula
MELO3C002511.2 Cucumis melo
MELO3C007350.2 Cucumis melo
MELO3C019224.2 Cucumis melo
Migut.H01207 Erythranthe guttata
Migut.M00385 Erythranthe guttata
Migut.M01262 Erythranthe guttata
MSTRG.12294 Avicennia marina
MSTRG.14841 Avicennia marina
MSTRG.7249 Avicennia marina
Nitab4.5_0000404g0030 Nicotiana tabacum
Nitab4.5_0000780g0070 Nicotiana tabacum
Nitab4.5_0001134g0140 Nicotiana tabacum
Nitab4.5_0001302g0040 Nicotiana tabacum
Nitab4.5_0002345g0100 Nicotiana tabacum
Nitab4.5_0003429g0040 Nicotiana tabacum
Nitab4.5_0006475g0010 Nicotiana tabacum
Nitab4.5_0008484g0010 Nicotiana tabacum
Nn1g03731 Nelumbo nucifera
Nn1g06941 Nelumbo nucifera
Oeu011068.1 Olea europaea
Oeu017971.1 Olea europaea
Oeu050806.1 Olea europaea
Oeu052536.2 Olea europaea
Oeu058168.1 Olea europaea
Oeu058170.1 Olea europaea
Os07g0545100 Oryza sativa ssp. japonica
Peaxi162Scf00007g01416 Petunia axillaris
Peaxi162Scf00012g00308 Petunia axillaris
Peaxi162Scf00082g01214 Petunia axillaris
Peaxi162Scf00315g00099 Petunia axillaris
PGR042G2293 Punica granatum
PGR042G2347 Punica granatum
PGR083G0841 Punica granatum
PGSC0003DMG400013741 Solanum tuberosum
PGSC0003DMG400013974 Solanum tuberosum
PGSC0003DMG400021715 Solanum tuberosum
PGSC0003DMG400026165 Solanum tuberosum
Phvul.002G218200 Phaseolus vulgaris
Phvul.005G112300 Phaseolus vulgaris
Phvul.006G196100 Phaseolus vulgaris
Phvul.011G107400 Phaseolus vulgaris
Potri.004G031200 Populus trichocarpa
Potri.007G119600 Populus trichocarpa
Potri.011G031500 Populus trichocarpa
Potri.017G040900 Populus trichocarpa
Prupe.3G222400 Prunus persica
Prupe.4G029600 Prunus persica
Psat1g210960 Pisum sativum
Psat5g265880 Pisum sativum
Psat7g105440 Pisum sativum
Psat7g197960 Pisum sativum
PSO541G0036 Papaver somniferum
PSO675G8180 Papaver somniferum
QL03p067636 Quercus lobata
QL05p077191 Quercus lobata
QL08p013924 Quercus lobata
QL08p013989 Quercus lobata
QL08p034224 Quercus lobata
QL93p0073_1299 Quercus lobata
RcHm_v2.0_Chr2g0160471 Rosa chinensis
RcHm_v2.0_Chr5g0004561 Rosa chinensis
Rhsim02G0115400 Rhododendron simsii
Rhsim04G0057400 Rhododendron simsii
Rhsim06G0155800 Rhododendron simsii
Rhsim13G0162400 Rhododendron simsii
Sabra04G0017600 Salix brachista
Sabra07G0096800 Salix brachista
Sabra07G0097100 Salix brachista
Sabra11G0019000 Salix brachista
Sabra11G0024800 Salix brachista
Sabra17G0027800 Salix brachista
SalBow1G3241 Salvia bowleyana
SalBow7G1123 Salvia bowleyana
SalBow8G0492 Salvia bowleyana
Sc12g0002460 Simmondsia chinensis
Sc24g0000570 Simmondsia chinensis
Sc24g0000580 Simmondsia chinensis
Sed0006474 Sechium edule
Sed0017857 Sechium edule
Sed0024097 Sechium edule
SEGI_05778 Sequoiadendron giganteum
SEGI_32946 Sequoiadendron giganteum
SGA_v2.0_scaffold159G37594 Striga asiatica
SGA_v2.0_scaffold34G13878 Striga asiatica
Solyc02g079940.3 Solanum lycopersicum
Solyc05g046130.4 Solanum lycopersicum
Solyc07g052910.3 Solanum lycopersicum
Solyc12g005700.2 Solanum lycopersicum
Sopen02g024690 Solanum pennellii
Sopen05g027350 Solanum pennellii
Sopen07g025810 Solanum pennellii
Sopen07g026460 Solanum pennellii
Sopen12g001630 Solanum pennellii
Sp1g04150 Schrenkiella parvula
Sp1g10130 Schrenkiella parvula
Sp4g14670 Schrenkiella parvula
Sp7g19380 Schrenkiella parvula
TAR521G0005 Trochodendron aralioides
TAR627G0815 Trochodendron aralioides
TAR629G1060 Trochodendron aralioides
THA.LOC104800977 Tarenaya hassleriana
THA.LOC104807909 Tarenaya hassleriana
THA.LOC104809519 Tarenaya hassleriana
THA.LOC104812948 Tarenaya hassleriana
Thecc.02G164100 Theobroma cacao
Thecc.06G208300 Theobroma cacao
Thecc.07G055800 Theobroma cacao
Thhalv10008905m.g Eutrema salsugineum
Thhalv10009712m.g Eutrema salsugineum
Thhalv10017335m.g Eutrema salsugineum
Thhalv10026413m.g Eutrema salsugineum
TPR.G13915 Trifolium pratense
TPR.G19050 Trifolium pratense
TPR.G30804 Trifolium pratense
TPR.G32652 Trifolium pratense
TPR.G35932 Trifolium pratense
TWI18G1331 Tripterygium wilfordii
TWI36G0213 Tripterygium wilfordii
TWI39G0329 Tripterygium wilfordii
TWI63G1266 Tripterygium wilfordii
unitig_578.g16775 Utricularia gibba
unitig_62.g23519 Utricularia gibba
unitig_699.g19610 Utricularia gibba
vmacro03737 Vaccinium macrocarpon
vmacro09319 Vaccinium macrocarpon
vmacro15842 Vaccinium macrocarpon
VMungo0251G1867 Vigna mungo
VMungo1080G0062 Vigna mungo
VMungo1127G0002 Vigna mungo
Zm00001eb173060 Zea mays
Zm00001eb323480 Zea mays

User provided reference genes

Program Settings