Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p04370 Brassica napus
A07p37090 Brassica napus
A09p19240 Brassica napus
Aa31LG10G5230 Aethionema arabicum
Aa31LG2G11680 Aethionema arabicum
Aa31LG4G10320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1075 Anthoceros agrestis
Actinidia06834 Actinidia chinensis
Actinidia23645 Actinidia chinensis
Actinidia28139 Actinidia chinensis
Actinidia34035 Actinidia chinensis
Actinidia38442 Actinidia chinensis
Ah.04g160320 Amaranthus hybridus
Ah.04g160340 Amaranthus hybridus
Ah.11g045110 Amaranthus hybridus
AL1G55210 Arabidopsis lyrata
AL1G65690 Arabidopsis lyrata
AL2G30080 Arabidopsis lyrata
Aqoxy2G03066 Aquilegia oxysepala
Aqoxy3G00041 Aquilegia oxysepala
Aqoxy3G04104 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8ET3C3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I8KQ46 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4K4IG Arachis hypogaea
AT1G48570 Arabidopsis thaliana
AT1G55040 Arabidopsis thaliana
ATR0178G031 Amborella trichopoda
ATR0706G175 Amborella trichopoda
ATR0753G124 Amborella trichopoda
ATR1149G004 Amborella trichopoda
Atru.chr11.199 Acer truncatum
Atru.chr11.202 Acer truncatum
Atru.chr11.948 Acer truncatum
Atru.chr2.366 Acer truncatum
Atru.chr2.367 Acer truncatum
Atru.chr2.370 Acer truncatum
Atru.chr9.1707 Acer truncatum
Atru.chr9.1708 Acer truncatum
Atru.chr9.1726 Acer truncatum
Atru.chr9.1727 Acer truncatum
AUR62000810 Chenopodium quinoa
AUR62005158 Chenopodium quinoa
AUR62025841 Chenopodium quinoa
AUR62029872 Chenopodium quinoa
BcaB03g14833 Brassica carinata
BcaB03g14834 Brassica carinata
BcaB07g31110 Brassica carinata
BcaC04g22036 Brassica carinata
BcaC08g43057 Brassica carinata
BcaC08g46522 Brassica carinata
BolC6t35434H Brassica oleracea
BolC6t39530H Brassica oleracea
BolC9t55342H Brassica oleracea
BraA06t23641Z Brassica rapa
BraA07t31271Z Brassica rapa
BraA09t37542Z Brassica rapa
C06p03160 Brassica napus
C06p44690 Brassica napus
C09p24250 Brassica napus
CAN.G1034.30 Capsicum annuum
CAN.G843.54 Capsicum annuum
CAN.G940.18 Capsicum annuum
CANSAT01G0729 Cannabis sativa
CANSAT80G2657 Cannabis sativa
CARHR038170 Cardamine hirsuta
CARHR063900 Cardamine hirsuta
CARHR289670 Cardamine hirsuta
Carub.0001s3768 Capsella rubella
Carub.0002s0804 Capsella rubella
Carub.0002s1738 Capsella rubella
Ca_05811_v3 Cicer arietinum L.
Ca_12553_v3 Cicer arietinum L.
Ca_25310_v3 Cicer arietinum L.
CBR_g49234 Chara braunii
Cc02_g33300 Coffea canephora
Cc04_g06240 Coffea canephora
Cc11_g07030 Coffea canephora
CDE02G3862 Ceratophyllum demersum
CDE04G2562 Ceratophyllum demersum
CDE05G1822 Ceratophyllum demersum
CDE06G0405 Ceratophyllum demersum
CDE08G0713 Ceratophyllum demersum
CDE11G0688 Ceratophyllum demersum
Cfa006600 Carpinus fangiana
Cfa015014 Carpinus fangiana
Cfa019654 Carpinus fangiana
Ciclev10000263m.g Citrus clementina
Ciclev10008350m.g Citrus clementina
Ciclev10017484m.g Citrus clementina
CiPaw.05G189600 Carya illinoinensis
CiPaw.08G163900 Carya illinoinensis
CiPaw.16G093600 Carya illinoinensis
ClCG01G006510 Citrullus lanatus
ClCG02G015620 Citrullus lanatus
ClCG06G014270 Citrullus lanatus
COL.COLO4_16578 Corchorus olitorius
COL.COLO4_37652 Corchorus olitorius
Cpa.g.sc2.208 Carica papaya
Cpa.g.sc3.394 Carica papaya
Cpa.g.sc48.69 Carica papaya
CsaV3_1G004400 Cucumis sativus L.
CsaV3_2G006480 Cucumis sativus L.
CsaV3_5G028110 Cucumis sativus L.
CSS0024731 Camellia sinensis var. sinensis
CSS0027585 Camellia sinensis var. sinensis
CSS0033632 Camellia sinensis var. sinensis
CSS0036165 Camellia sinensis var. sinensis
DCAR_003338 Daucus carota
DCAR_014506 Daucus carota
DCAR_026798 Daucus carota
Dinv04133 Davidia involucrata
Dinv05827 Davidia involucrata
Dinv07737 Davidia involucrata
Dinv10861 Davidia involucrata
Duzib068G1216 Durio zibethinus
Duzib084G0736 Durio zibethinus
Duzib268G0485 Durio zibethinus
ECA233G2965 Erigeron canadensis
ECA234G0533 Erigeron canadensis
ECA236G3954 Erigeron canadensis
EL10Ac4g09370 Beta vulgaris
EL10Ac5g11453 Beta vulgaris
EL10Ac5g11454 Beta vulgaris
Eucgr.B00999 Eucalyptus grandis
Eucgr.B01944 Eucalyptus grandis
FAN04G0965 Fragaria x ananassa
FAN07G0211 Fragaria x ananassa
FAN08G0945 Fragaria x ananassa
FAN13G2720 Fragaria x ananassa
FAN17G1953 Fragaria x ananassa
FAN18G1832 Fragaria x ananassa
FAN22G0681 Fragaria x ananassa
FvH4_4g33730 Fragaria vesca
FvH4_5g17400 Fragaria vesca
FvH4_6g06160 Fragaria vesca
Glyma.02G084500 Glycine max
Glyma.03G237100 Glycine max
Glyma.05G056200 Glycine max
Glyma.07G102100 Glycine max
Glyma.09G177100 Glycine max
Glyma.10G108502 Glycine max
Glyma.10G130300 Glycine max
Glyma.10G130350 Glycine max
Glyma.10G130400 Glycine max
Glyma.19G234800 Glycine max
Gohir.A01G147618 Gossypium hirsutum
Gohir.A08G210000 Gossypium hirsutum
Gohir.A11G003000 Gossypium hirsutum
Gohir.A11G265500 Gossypium hirsutum
Gohir.D01G140500 Gossypium hirsutum
Gohir.D08G226900 Gossypium hirsutum
Gohir.D11G002600 Gossypium hirsutum
Gohir.D11G275700 Gossypium hirsutum
Gorai.002G172700 Gossypium raimondii
Gorai.004G240800 Gossypium raimondii
Gorai.007G003600 Gossypium raimondii
Gorai.007G297700 Gossypium raimondii
GSVIVG01000088001 Vitis vinifera
GSVIVG01008444001 Vitis vinifera
GSVIVG01011669001 Vitis vinifera
HanXRQChr11g0339591 Helianthus annuus
HanXRQChr12g0366651 Helianthus annuus
HanXRQChr13g0386771 Helianthus annuus
HanXRQChr14g0430201 Helianthus annuus
HanXRQChr17g0566621 Helianthus annuus
Haze_04183 Corylus avellana
Haze_10892 Corylus avellana
Haze_18858 Corylus avellana
Hma1.2p1_1077F.1_g254715 Hydrangea macrophylla
HPP92_001915 Vanilla planifolia
HPP92_004163 Vanilla planifolia
HPP92_028160 Vanilla planifolia
Hund07077 Selenicereus undatus
Hund17523 Selenicereus undatus
Hund17524 Selenicereus undatus
Lalb_Chr04g0260711 Lupinus albus
Lalb_Chr10g0095791 Lupinus albus
Lalb_Chr14g0370721 Lupinus albus
Lalb_Chr24g0398081 Lupinus albus
Lj1g0025433 Lotus japonicus
Lj2g0015979 Lotus japonicus
Lj2g0018293 Lotus japonicus
Lj5A158T70 Lonicera japonica
Lj6A739T46 Lonicera japonica
Lj9A97T17 Lonicera japonica
Lj9A98T12 Lonicera japonica
Lj9C98T0 Lonicera japonica
Lj9P115T4 Lonicera japonica
Lju1040A2G24 Lonicera japonica
Lju515C2G3 Lonicera japonica
Lju963A5T21 Lonicera japonica
Lsat_1_v5_gn_4_12640 Lactuca sativa
Lsat_1_v5_gn_8_28640 Lactuca sativa
Lsat_1_v5_gn_8_28800 Lactuca sativa
Lsat_1_v5_gn_9_86880 Lactuca sativa
Manes.06G006000 Manihot esculenta
Manes.17G083400 Manihot esculenta
Mapoly0027s0074 Marchantia polymorpha
MBI13_g00277_MAGBIO Magnolia biondii
MBI13_g40318_MAGBIO Magnolia biondii
MBI18_g01959_MAGBIO Magnolia biondii
MCO10G333 Micromonas commoda
MD04G1203800 Malus domestica
MD06G1227200 Malus domestica
MD12G1217600 Malus domestica
MD13G1029300 Malus domestica
MD14G1236700 Malus domestica
Medtr1g032260 Medicago truncatula
Medtr6g069400 Medicago truncatula
Medtr7g113360 Medicago truncatula
MELO3C004239.2 Cucumis melo
MELO3C017362.2 Cucumis melo
Migut.E00470 Erythranthe guttata
Migut.I00297 Erythranthe guttata
Migut.N02063 Erythranthe guttata
Migut.N02069 Erythranthe guttata
MSTRG.22935 Avicennia marina
MSTRG.27990 Avicennia marina
Nitab4.5_0000135g0090 Nicotiana tabacum
Nitab4.5_0000137g0050 Nicotiana tabacum
Nitab4.5_0003156g0070 Nicotiana tabacum
Nitab4.5_0003401g0030 Nicotiana tabacum
Nitab4.5_0004556g0040 Nicotiana tabacum
Nitab4.5_0021152g0010 Nicotiana tabacum
Nitab4.5_0022112g0010 Nicotiana tabacum
Nn1g06748 Nelumbo nucifera
Nn4g24243 Nelumbo nucifera
Nn4g25950 Nelumbo nucifera
Oeu020847.1 Olea europaea
Oeu044022.2 Olea europaea
Oeu061237.1 Olea europaea
Os03g0708900 Oryza sativa ssp. japonica
Os03g0712200 Oryza sativa ssp. japonica
Os07g0404300 Oryza sativa ssp. japonica
Peaxi162Scf00037g00630 Petunia axillaris
Peaxi162Scf00314g00225 Petunia axillaris
Peaxi162Scf00376g00834 Petunia axillaris
PGR083G0787 Punica granatum
PGR102G2523 Punica granatum
PGSC0003DMG400005673 Solanum tuberosum
PGSC0003DMG400024695 Solanum tuberosum
PGSC0003DMG400025225 Solanum tuberosum
Phvul.003G019900 Phaseolus vulgaris
Phvul.004G151100 Phaseolus vulgaris
Phvul.006G091200 Phaseolus vulgaris
Potri.005G033000 Populus trichocarpa
Potri.010G107400 Populus trichocarpa
Potri.012G046500 Populus trichocarpa
Potri.013G022300 Populus trichocarpa
Potri.015G038200 Populus trichocarpa
Pp3c17_18380 Physcomitrium patens
Pp3c17_18383 Physcomitrium patens
Prupe.1G332300 Prunus persica
Prupe.5G233800 Prunus persica
Prupe.6G323900 Prunus persica
Psat0s2406g0200 Pisum sativum
Psat1g033520 Pisum sativum
Psat6g045560 Pisum sativum
PSO017G4311 Papaver somniferum
PSO017G4830 Papaver somniferum
PSO170G3888 Papaver somniferum
PSO210G5619 Papaver somniferum
PSO478G0455 Papaver somniferum
PSO478G3005 Papaver somniferum
PSO478G3241 Papaver somniferum
QL03p007369 Quercus lobata
QL03p007735 Quercus lobata
QL03p035421 Quercus lobata
QL03p035463 Quercus lobata
QL03p035510 Quercus lobata
QL03p035512 Quercus lobata
QL10p029677 Quercus lobata
RcHm_v2.0_Chr1g0324471 Rosa chinensis
RcHm_v2.0_Chr3g0455171 Rosa chinensis
RcHm_v2.0_Chr4g0443241 Rosa chinensis
RcHm_v2.0_Chr7g0178341 Rosa chinensis
Rhsim07G0183400 Rhododendron simsii
Rhsim08G0126300 Rhododendron simsii
Rhsim09G0039200 Rhododendron simsii
Sabra05G0035200 Salix brachista
Sabra10G0078500 Salix brachista
Sabra12G0032600 Salix brachista
Sabra13G0024500 Salix brachista
Sabra15G0037000 Salix brachista
Sc14g0006930 Simmondsia chinensis
Sc16g0008490 Simmondsia chinensis
Sed0008851 Sechium edule
Sed0010051 Sechium edule
Sed0021528 Sechium edule
Sed0021899 Sechium edule
SEGI_07835 Sequoiadendron giganteum
SEGI_20065 Sequoiadendron giganteum
SEGI_35734 Sequoiadendron giganteum
SEGI_36567 Sequoiadendron giganteum
SEGI_37440 Sequoiadendron giganteum
SEGI_38156 Sequoiadendron giganteum
SEGI_39397 Sequoiadendron giganteum
SEGI_40519 Sequoiadendron giganteum
SEGI_40812 Sequoiadendron giganteum
SGA_v2.0_scaffold139G35412 Striga asiatica
SGA_v2.0_scaffold19G08822 Striga asiatica
SGA_v2.0_scaffold80G25789 Striga asiatica
SHI04219 Sapria himalayana
SHI04438 Sapria himalayana
SHI43581 Sapria himalayana
SMO329G0036 Selaginella moellendorffii
SMO358G0756 Selaginella moellendorffii
Solyc01g099230.3 Solanum lycopersicum
Solyc03g118680.3 Solanum lycopersicum
Solyc08g014510.3 Solanum lycopersicum
Sopen01g042780 Solanum pennellii
Sopen03g037640 Solanum pennellii
Sopen08g005500 Solanum pennellii
Sp1g35510 Schrenkiella parvula
Sp5g25835 Schrenkiella parvula
SpUn0004_0260 Schrenkiella parvula
TAR365G0654 Trochodendron aralioides
TAR365G1152 Trochodendron aralioides
TAR374G1479 Trochodendron aralioides
TAR374G1633 Trochodendron aralioides
TAR622G0227 Trochodendron aralioides
TAR629G2394 Trochodendron aralioides
TAR633G0949 Trochodendron aralioides
TAR633G1507 Trochodendron aralioides
TAR633G2292 Trochodendron aralioides
THA.LOC104805882 Tarenaya hassleriana
THA.LOC104809845 Tarenaya hassleriana
THA.LOC104820348 Tarenaya hassleriana
THA.LOC104822164 Tarenaya hassleriana
Thecc.02G291600 Theobroma cacao
Thecc.03G055700 Theobroma cacao
Thecc.05G301200 Theobroma cacao
Thhalv10011523m.g Eutrema salsugineum
Thhalv10023272m.g Eutrema salsugineum
TPR.G11091 Trifolium pratense
TPR.G33222 Trifolium pratense
TPR.G36896 Trifolium pratense
TPR.G8642 Trifolium pratense
TWI15G0490 Tripterygium wilfordii
TWI56G0127 Tripterygium wilfordii
TWI60G0176 Tripterygium wilfordii
TWI74G0432 Tripterygium wilfordii
TWI74G1012 Tripterygium wilfordii
unitig_699.g19468 Utricularia gibba
vmacro00553 Vaccinium macrocarpon
vmacro04985 Vaccinium macrocarpon
vmacro17779 Vaccinium macrocarpon
VMungo0464G1059 Vigna mungo
VMungo0464G1884 Vigna mungo
VMungo0540G0154 Vigna mungo
VMungo0647G1870 Vigna mungo
VMungo1215G0848 Vigna mungo
Zm00001eb094690 Zea mays
Zm00001eb216320 Zea mays
Zm00001eb216480 Zea mays

User provided reference genes

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