Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05950 Brassica napus
A03p09730 Brassica napus
A03p09740 Brassica napus
A07p15590 Brassica napus
A07p41960 Brassica napus
A10p19770 Brassica napus
Aa31LG4G12560 Aethionema arabicum
Aa31LG4G6420 Aethionema arabicum
Aa31LG7G4840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2368 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.4054 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4041 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1804 Anthoceros agrestis
Actinidia09388 Actinidia chinensis
Actinidia20313 Actinidia chinensis
Actinidia20691 Actinidia chinensis
Actinidia26417 Actinidia chinensis
Actinidia31777 Actinidia chinensis
Ah.01g017260 Amaranthus hybridus
Ah.14g081100 Amaranthus hybridus
Ah.16g103280 Amaranthus hybridus
AL2G36440 Arabidopsis lyrata
AL6G31510 Arabidopsis lyrata
Aqoxy7G01964 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2V8ACV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J7LX5I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K9VI44 Arachis hypogaea
AT1G76340 Arabidopsis thaliana
AT5G19980 Arabidopsis thaliana
ATR0075G018 Amborella trichopoda
ATR0626G198 Amborella trichopoda
ATR0767G208 Amborella trichopoda
ATR1120G173 Amborella trichopoda
Atru.chr1.735 Acer truncatum
Atru.chr7.1261 Acer truncatum
Atru.chr7.1262 Acer truncatum
Atru.chr8.1042 Acer truncatum
AUR62000110 Chenopodium quinoa
AUR62011056 Chenopodium quinoa
AUR62012302 Chenopodium quinoa
AUR62022941 Chenopodium quinoa
AUR62033434 Chenopodium quinoa
BcaB01g04819 Brassica carinata
BcaB01g04820 Brassica carinata
BcaB01g04849 Brassica carinata
BcaB03g14312 Brassica carinata
BcaB05g22889 Brassica carinata
BcaB08g36548 Brassica carinata
BcaC03g13724 Brassica carinata
BcaC04g19402 Brassica carinata
BcaC06g34823 Brassica carinata
BcaC08g47131 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01900 Brassica napus
BolC2t06999H Brassica oleracea
BolC3t13601H Brassica oleracea
BolC3t13605H Brassica oleracea
BolC6t40078H Brassica oleracea
BolC7t42833H Brassica oleracea
BolC9t58476H Brassica oleracea
BraA02t05547Z Brassica rapa
BraA03t10289Z Brassica rapa
BraA03t10290Z Brassica rapa
BraA07t29298Z Brassica rapa
BraA07t31726Z Brassica rapa
BraA10t44053Z Brassica rapa
C03p11310 Brassica napus
C03p11320 Brassica napus
C06p50530 Brassica napus
C07p22940 Brassica napus
C09p56090 Brassica napus
CAN.G1046.8 Capsicum annuum
CAN.G1410.3 Capsicum annuum
CAN.G352.53 Capsicum annuum
CANSAT56G0939 Cannabis sativa
CANSAT56G3449 Cannabis sativa
CARHR021070 Cardamine hirsuta
CARHR069890 Cardamine hirsuta
CARHR192870 Cardamine hirsuta
Carub.0002s2323 Capsella rubella
Carub.0006s1835 Capsella rubella
Ca_20122_v3 Cicer arietinum L.
Ca_21714_v3 Cicer arietinum L.
CBR_g21763 Chara braunii
Cc02_g04330 Coffea canephora
CDE08G1296 Ceratophyllum demersum
CDE11G0242 Ceratophyllum demersum
Cfa003318 Carpinus fangiana
Cfa007489 Carpinus fangiana
Cfa008162 Carpinus fangiana
Ciclev10005204m.g Citrus clementina
Ciclev10008794m.g Citrus clementina
CiPaw.03G092900 Carya illinoinensis
CiPaw.03G238300 Carya illinoinensis
CiPaw.04G168200 Carya illinoinensis
ClCG09G010630 Citrullus lanatus
ClCG11G002730 Citrullus lanatus
COL.COLO4_34978 Corchorus olitorius
Cpa.g.c35967 Carica papaya
Cpa.g.sc19.275 Carica papaya
Cpa.g.sc75.83 Carica papaya
Cre06.g305900 Chlamydomonas reinhardtii
Cre11.g467754 Chlamydomonas reinhardtii
Cre18.g748997 Chlamydomonas reinhardtii
CsaV3_2G002570 Cucumis sativus L.
CsaV3_7G021620 Cucumis sativus L.
CSS0006365 Camellia sinensis var. sinensis
CSS0009380 Camellia sinensis var. sinensis
CSS0015448 Camellia sinensis var. sinensis
CSS0027696 Camellia sinensis var. sinensis
CSS0046260 Camellia sinensis var. sinensis
DCAR_009220 Daucus carota
DCAR_009446 Daucus carota
DCAR_017854 Daucus carota
DCAR_020186 Daucus carota
Dinv06560 Davidia involucrata
Dinv28580 Davidia involucrata
Dinv41552 Davidia involucrata
Duzib093G1176 Durio zibethinus
Duzib133G0190 Durio zibethinus
Duzib150G0271 Durio zibethinus
Duzib168G1508 Durio zibethinus
Duzib187G1949 Durio zibethinus
ECA234G2721 Erigeron canadensis
ECA234G3177 Erigeron canadensis
ECA246G3500 Erigeron canadensis
EL10Ac7g15778 Beta vulgaris
EL10Ac8g18576 Beta vulgaris
Eucgr.C04157 Eucalyptus grandis
Eucgr.G01094 Eucalyptus grandis
Eucgr.G01096 Eucalyptus grandis
Eucgr.L03651 Eucalyptus grandis
FAN02G3699 Fragaria x ananassa
FAN04G2226 Fragaria x ananassa
FAN05G1195 Fragaria x ananassa
FAN08G0464 Fragaria x ananassa
FAN09G3936 Fragaria x ananassa
FAN13G2206 Fragaria x ananassa
FAN14G3892 Fragaria x ananassa
FAN15G2790 Fragaria x ananassa
FAN18G3964 Fragaria x ananassa
FAN24G0032 Fragaria x ananassa
FAN27G0597 Fragaria x ananassa
FvH4_2g20640 Fragaria vesca
FvH4_5g25930 Fragaria vesca
FvH4_6g29120 Fragaria vesca
Glyma.01G110200 Glycine max
Glyma.03G075700 Glycine max
Glyma.03G075900 Glycine max
Glyma.17G119300 Glycine max
Gohir.A01G189501 Gossypium hirsutum
Gohir.A05G020300 Gossypium hirsutum
Gohir.A08G240150 Gossypium hirsutum
Gohir.A13G198100 Gossypium hirsutum
Gohir.D01G180100 Gossypium hirsutum
Gohir.D05G021400 Gossypium hirsutum
Gohir.D08G260750 Gossypium hirsutum
Gohir.D13G203601 Gossypium hirsutum
Gorai.002G222500 Gossypium raimondii
Gorai.004G278800 Gossypium raimondii
Gorai.009G021600 Gossypium raimondii
Gorai.013G232400 Gossypium raimondii
GSVIVG01002264001 Vitis vinifera
GSVIVG01007423001 Vitis vinifera
GSVIVG01015467001 Vitis vinifera
GSVIVG01018675001 Vitis vinifera
GSVIVG01037954001 Vitis vinifera
HanXRQChr10g0316831 Helianthus annuus
HanXRQChr12g0356051 Helianthus annuus
HanXRQChr16g0501421 Helianthus annuus
HanXRQChr17g0547651 Helianthus annuus
Haze_13883 Corylus avellana
Haze_14609 Corylus avellana
Haze_25651 Corylus avellana
Haze_25654 Corylus avellana
Hma1.2p1_0018F.1_g012930 Hydrangea macrophylla
Hma1.2p1_1916F.1_g307450 Hydrangea macrophylla
HPP92_017545 Vanilla planifolia
HPP92_017564 Vanilla planifolia
HPP92_017567 Vanilla planifolia
HPP92_018573 Vanilla planifolia
Hund13895 Selenicereus undatus
Lalb_Chr07g0193381 Lupinus albus
Lalb_Chr12g0197681 Lupinus albus
Lalb_Chr13g0302181 Lupinus albus
Lj1P979T26 Lonicera japonica
Lj3g0003227 Lotus japonicus
Lj3g0021685 Lotus japonicus
Lj4g0012504 Lotus japonicus
Lj7P637T25 Lonicera japonica
Lj9P160T6 Lonicera japonica
Lj9P174T15 Lonicera japonica
Lsat_1_v5_gn_5_98400 Lactuca sativa
Lsat_1_v5_gn_5_99881 Lactuca sativa
Lsat_1_v5_gn_8_161421 Lactuca sativa
Manes.06G059900 Manihot esculenta
Manes.12G014100 Manihot esculenta
Manes.13G017100 Manihot esculenta
Manes.14G127900 Manihot esculenta
Mapoly0002s0006 Marchantia polymorpha
Mapoly0132s0011 Marchantia polymorpha
MBI01_g15487_MAGBIO Magnolia biondii
MBI01_g15488_MAGBIO Magnolia biondii
MBI01_g28183_MAGBIO Magnolia biondii
MBI02_g39756_MAGBIO Magnolia biondii
MBI02_g41633_MAGBIO Magnolia biondii
MBI02_g41634_MAGBIO Magnolia biondii
MBI02_g46154_MAGBIO Magnolia biondii
MBI02_g46155_MAGBIO Magnolia biondii
MBI04_g29470_MAGBIO Magnolia biondii
MBI04_g33816_MAGBIO Magnolia biondii
MCO04G058 Micromonas commoda
MCO09G653 Micromonas commoda
MD06G1005300 Malus domestica
MD15G1179300 Malus domestica
MD15G1180200 Malus domestica
Medtr1g100860 Medicago truncatula
Medtr4g018770 Medicago truncatula
Medtr4g113270 Medicago truncatula
MELO3C004533.2 Cucumis melo
MELO3C013186.2 Cucumis melo
Migut.B00989 Erythranthe guttata
Migut.F01187 Erythranthe guttata
MSTRG.131 Avicennia marina
MSTRG.27956 Avicennia marina
MSTRG.5136 Avicennia marina
MSTRG.8409 Avicennia marina
Nitab4.5_0000339g0030 Nicotiana tabacum
Nitab4.5_0000339g0040 Nicotiana tabacum
Nitab4.5_0000530g0090 Nicotiana tabacum
Nitab4.5_0003085g0010 Nicotiana tabacum
Nitab4.5_0005418g0030 Nicotiana tabacum
Nitab4.5_0013500g0010 Nicotiana tabacum
Nn1g05227 Nelumbo nucifera
Nn2g11895 Nelumbo nucifera
Nn5g27678 Nelumbo nucifera
Nn7g37461 Nelumbo nucifera
Nn8g38800 Nelumbo nucifera
Nn8g39339 Nelumbo nucifera
Nn8g39340 Nelumbo nucifera
Oeu035484.1 Olea europaea
Os02g0154600 Oryza sativa ssp. japonica
Os03g0215000 Oryza sativa ssp. japonica
Os08g0203900 Oryza sativa ssp. japonica
Os09g0314333 Oryza sativa ssp. japonica
Peaxi162Scf00089g00311 Petunia axillaris
Peaxi162Scf00361g00092 Petunia axillaris
Peaxi162Scf00763g00027 Petunia axillaris
PGR042G0346 Punica granatum
PGR102G0071 Punica granatum
PGSC0003DMG400015200 Solanum tuberosum
PGSC0003DMG400027065 Solanum tuberosum
Phvul.003G160100 Phaseolus vulgaris
Phvul.010G007600 Phaseolus vulgaris
Potri.008G177700 Populus trichocarpa
Potri.010G057600 Populus trichocarpa
Potri.018G071700 Populus trichocarpa
Pp3c14_9050 Physcomitrium patens
Pp3c20_17530 Physcomitrium patens
Pp3c23_5440 Physcomitrium patens
Pp3c8_16270 Physcomitrium patens
PRCOL_00001619 Prasinoderma coloniale
PRCOL_00005725 Prasinoderma coloniale
PRCOL_00006142 Prasinoderma coloniale
PRCOL_00006568 Prasinoderma coloniale
Prupe.3G152800 Prunus persica
Prupe.5G006600 Prunus persica
Prupe.7G236300 Prunus persica
Psat3g057640 Pisum sativum
Psat4g023120 Pisum sativum
Psat4g042120 Pisum sativum
Psat4g134760 Pisum sativum
Psat5g249080 Pisum sativum
Psat5g292800 Pisum sativum
Psat6g104720 Pisum sativum
Psat6g196080 Pisum sativum
Psat7g242840 Pisum sativum
Psat7g242880 Pisum sativum
PSO339G3011 Papaver somniferum
PSO384G3336 Papaver somniferum
PSO541G3801 Papaver somniferum
PSO675G0031 Papaver somniferum
QL02p086988 Quercus lobata
QL08p055526 Quercus lobata
RcHm_v2.0_Chr2g0089551 Rosa chinensis
RcHm_v2.0_Chr7g0216461 Rosa chinensis
Rhsim01G0088800 Rhododendron simsii
Rhsim08G0066900 Rhododendron simsii
Rhsim09G0191100 Rhododendron simsii
Sabra10G0047800 Salix brachista
Sabra18G0062400 Salix brachista
SalBow8G3542 Salvia bowleyana
Sc08g0006950 Simmondsia chinensis
Sc10g0002630 Simmondsia chinensis
Sc11g0005290 Simmondsia chinensis
Sc18g0000900 Simmondsia chinensis
Sed0005524 Sechium edule
Sed0009673 Sechium edule
Sed0011176 Sechium edule
Sed0026405 Sechium edule
SEGI_13973 Sequoiadendron giganteum
SEGI_36872 Sequoiadendron giganteum
SEGI_40314 Sequoiadendron giganteum
SGA_v2.0_scaffold136G35005 Striga asiatica
SGA_v2.0_scaffold4G01956 Striga asiatica
SGA_v2.0_scaffold53G19318 Striga asiatica
SGA_v2.0_scaffold75G24936 Striga asiatica
SHI17948 Sapria himalayana
SHI23013 Sapria himalayana
SHI30679 Sapria himalayana
SMO141G0252 Selaginella moellendorffii
SMO356G0036 Selaginella moellendorffii
Solyc03g110970.2 Solanum lycopersicum
Solyc06g071950.3 Solanum lycopersicum
Solyc09g065600.3 Solanum lycopersicum
Sopen03g030160 Solanum pennellii
Sopen06g028230 Solanum pennellii
Sopen09g027350 Solanum pennellii
Sp1g18310 Schrenkiella parvula
Sp5g31470 Schrenkiella parvula
Sp6g24400 Schrenkiella parvula
TAR374G1178 Trochodendron aralioides
TAR383G0607 Trochodendron aralioides
TAR626G0541 Trochodendron aralioides
TAR629G1632 Trochodendron aralioides
TAR629G3095 Trochodendron aralioides
THA.LOC104799744 Tarenaya hassleriana
THA.LOC104809795 Tarenaya hassleriana
THA.LOC104811047 Tarenaya hassleriana
THA.LOC104811467 Tarenaya hassleriana
Thecc.08G127100 Theobroma cacao
Thecc.09G118800 Theobroma cacao
Thhalv10009949m.g Eutrema salsugineum
Thhalv10015800m.g Eutrema salsugineum
Thhalv10018733m.g Eutrema salsugineum
TPR.G10721 Trifolium pratense
TPR.G27156 Trifolium pratense
TPR.G8197 Trifolium pratense
TWI14G0697 Tripterygium wilfordii
TWI23G0851 Tripterygium wilfordii
TWI34G1722 Tripterygium wilfordii
TWI39G0682 Tripterygium wilfordii
unitig_0.g270 Utricularia gibba
unitig_42.g32308 Utricularia gibba
unitig_60.g25659 Utricularia gibba
unitig_699.g19666 Utricularia gibba
unitig_746.g26885 Utricularia gibba
unitig_899.g14745 Utricularia gibba
unitig_899.g15630 Utricularia gibba
vmacro20344 Vaccinium macrocarpon
vmacro20687 Vaccinium macrocarpon
VMungo0331G0305 Vigna mungo
VMungo1215G1686 Vigna mungo
Zm00001eb008660 Zea mays
Zm00001eb198210 Zea mays
Zm00001eb309610 Zea mays
Zm00001eb400160 Zea mays

User provided reference genes

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