Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20190 Brassica napus
A03p13780 Brassica napus
A03p50330 Brassica napus
A08p12930 Brassica napus
A08p32960 Brassica napus
A09p64060 Brassica napus
A10p13080 Brassica napus
Aa31LG2G12390 Aethionema arabicum
Aa31LG3G11780 Aethionema arabicum
Aa31LG6G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3671 Anthoceros agrestis
Actinidia04995 Actinidia chinensis
Actinidia11907 Actinidia chinensis
Actinidia11908 Actinidia chinensis
Actinidia28960 Actinidia chinensis
Actinidia30387 Actinidia chinensis
Actinidia30389 Actinidia chinensis
Ah.06g180970 Amaranthus hybridus
Ah.09g233860 Amaranthus hybridus
Ah.14g087390 Amaranthus hybridus
AL1G23420 Arabidopsis lyrata
AL236U10010 Arabidopsis lyrata
AL7G37520 Arabidopsis lyrata
AL8G31440 Arabidopsis lyrata
Aqoxy1G04278 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.21F8WZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5CFI8R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DFDN71 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L4SZG2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L6LFU0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TX1KI1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U3UNQX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UDIE03 Arachis hypogaea
AT1G12150 Arabidopsis thaliana
AT4G17210 Arabidopsis thaliana
AT5G55860 Arabidopsis thaliana
ATR0751G186 Amborella trichopoda
Atru.chr1.2237 Acer truncatum
Atru.chr1.2239 Acer truncatum
Atru.chr2.3710 Acer truncatum
AUR62012857 Chenopodium quinoa
AUR62017147 Chenopodium quinoa
AUR62021810 Chenopodium quinoa
AUR62035660 Chenopodium quinoa
BcaB03g13203 Brassica carinata
BcaB04g18402 Brassica carinata
BcaB04g18403 Brassica carinata
BcaB04g18404 Brassica carinata
BcaB08g35954 Brassica carinata
BcaC04g20191 Brassica carinata
BcaC04g20192 Brassica carinata
BcaC04g20194 Brassica carinata
BcaC05g25241 Brassica carinata
BcaC06g33550 Brassica carinata
BcaC07g38051 Brassica carinata
BcaC07g41726 Brassica carinata
BcaC09g50446 Brassica carinata
BcaNung00114 Brassica carinata
BcaNung00115 Brassica carinata
BcaNung00116 Brassica carinata
BcaNung03476 Brassica carinata
BcaNung05493 Brassica carinata
BcaNung07007 Brassica carinata
BcaNung07008 Brassica carinata
BcaNung07009 Brassica carinata
BcaNung07010 Brassica carinata
BolC3t14044H Brassica oleracea
BolC5t29846H Brassica oleracea
BolC7t45372H Brassica oleracea
BolC8t48440H Brassica oleracea
BolC8t49155H Brassica oleracea
BolC8t52305H Brassica oleracea
BolC9t57534H Brassica oleracea
BraA01t01943Z Brassica rapa
BraA03t10681Z Brassica rapa
BraA03t14122Z Brassica rapa
BraA08t35216Z Brassica rapa
BraA09t41752Z Brassica rapa
C01p25330 Brassica napus
C03p16210 Brassica napus
C05p11040 Brassica napus
C07p48640 Brassica napus
C08p15260 Brassica napus
C08p47640 Brassica napus
C09p46840 Brassica napus
CAN.G1156.23 Capsicum annuum
CAN.G1263.4 Capsicum annuum
CAN.G623.22 Capsicum annuum
CANSAT11G0161 Cannabis sativa
CANSAT56G2984 Cannabis sativa
CARHR012500 Cardamine hirsuta
CARHR223810 Cardamine hirsuta
CARHR269240 Cardamine hirsuta
Carub.0001s1184 Capsella rubella
Carub.0007s2421 Capsella rubella
Carub.0008s1622 Capsella rubella
Ca_00766_v3 Cicer arietinum L.
Ca_06402_v3 Cicer arietinum L.
Ca_12442_v3 Cicer arietinum L.
Cc05_g15100 Coffea canephora
Cc06_g00130 Coffea canephora
Cc09_g00270 Coffea canephora
CDE01G0234 Ceratophyllum demersum
CDE01G0404 Ceratophyllum demersum
CDE02G0362 Ceratophyllum demersum
CDE02G3428 Ceratophyllum demersum
CDE02G3920 Ceratophyllum demersum
CDE05G1411 Ceratophyllum demersum
CDE05G2274 Ceratophyllum demersum
CDE10G1028 Ceratophyllum demersum
CDE10G1129 Ceratophyllum demersum
Cfa000026 Carpinus fangiana
Cfa016913 Carpinus fangiana
Ciclev10006878m.g Citrus clementina
Ciclev10007701m.g Citrus clementina
Ciclev10014746m.g Citrus clementina
CiPaw.10G082700 Carya illinoinensis
CiPaw.11G205100 Carya illinoinensis
CiPaw.12G139200 Carya illinoinensis
ClCG01G011200 Citrullus lanatus
ClCG10G004390 Citrullus lanatus
COL.COLO4_09854 Corchorus olitorius
COL.COLO4_20302 Corchorus olitorius
COL.COLO4_31944 Corchorus olitorius
Cpa.g.sc12.122 Carica papaya
Cpa.g.sc27.220 Carica papaya
CsaV3_1G015450 Cucumis sativus L.
CsaV3_3G004170 Cucumis sativus L.
CSS0010892 Camellia sinensis var. sinensis
CSS0020968 Camellia sinensis var. sinensis
CSS0025881 Camellia sinensis var. sinensis
CSS0027094 Camellia sinensis var. sinensis
CSS0038969 Camellia sinensis var. sinensis
CSS0046389 Camellia sinensis var. sinensis
DCAR_002246 Daucus carota
DCAR_013243 Daucus carota
Dinv07157 Davidia involucrata
Dinv10348 Davidia involucrata
Dinv40870 Davidia involucrata
Dinv40871 Davidia involucrata
Duzib213G1002 Durio zibethinus
Duzib235G1271 Durio zibethinus
Duzib268G1786 Durio zibethinus
ECA150G0005 Erigeron canadensis
ECA234G3071 Erigeron canadensis
EL10Ac4g07523 Beta vulgaris
EL10Ac8g20270 Beta vulgaris
Eucgr.E03845 Eucalyptus grandis
Eucgr.F02039 Eucalyptus grandis
Eucgr.L01393 Eucalyptus grandis
FAN11G2212 Fragaria x ananassa
FAN16G2144 Fragaria x ananassa
FAN21G1072 Fragaria x ananassa
FAN21G2473 Fragaria x ananassa
FAN25G2361 Fragaria x ananassa
FAN25G2403 Fragaria x ananassa
FvH4_3g00281 Fragaria vesca
FvH4_3g42741 Fragaria vesca
Glyma.02G301400 Glycine max
Glyma.08G330800 Glycine max
Glyma.09G015000 Glycine max
Glyma.15G120700 Glycine max
Glyma.17G005200 Glycine max
Glyma.18G075600 Glycine max
Gohir.A01G092700 Gossypium hirsutum
Gohir.A04G005000 Gossypium hirsutum
Gohir.A10G007800 Gossypium hirsutum
Gohir.A13G131833 Gossypium hirsutum
Gohir.D01G077200 Gossypium hirsutum
Gohir.D05G384900 Gossypium hirsutum
Gohir.D10G007700 Gossypium hirsutum
Gohir.D13G135250 Gossypium hirsutum
Gorai.002G101700 Gossypium raimondii
Gorai.009G451600 Gossypium raimondii
Gorai.011G008400 Gossypium raimondii
Gorai.013G151600 Gossypium raimondii
GSVIVG01014707001 Vitis vinifera
HanXRQChr03g0080331 Helianthus annuus
HanXRQChr13g0408361 Helianthus annuus
HanXRQChr15g0470211 Helianthus annuus
HanXRQChr16g0515721 Helianthus annuus
Haze_07028 Corylus avellana
Haze_09842 Corylus avellana
Hma1.2p1_0048F.1_g027990 Hydrangea macrophylla
Hma1.2p1_1094F.1_g256430 Hydrangea macrophylla
Hma1.2p1_1516F.1_g288370 Hydrangea macrophylla
HPP92_003811 Vanilla planifolia
HPP92_003812 Vanilla planifolia
HPP92_003813 Vanilla planifolia
HPP92_020563 Vanilla planifolia
HPP92_020564 Vanilla planifolia
HPP92_020565 Vanilla planifolia
Hund01866 Selenicereus undatus
Hund23030 Selenicereus undatus
Lalb_Chr07g0176921 Lupinus albus
Lalb_Chr12g0195931 Lupinus albus
Lalb_Chr13g0304391 Lupinus albus
Lalb_Chr15g0082201 Lupinus albus
Lalb_Chr15g0088281 Lupinus albus
Lalb_Chr18g0057361 Lupinus albus
Lalb_Chr20g0114111 Lupinus albus
Lj1C1247T2 Lonicera japonica
Lj1C1247T3 Lonicera japonica
Lj1C892G3 Lonicera japonica
Lj4g0001684 Lotus japonicus
Lj6A248T28 Lonicera japonica
Lj6A253T11 Lonicera japonica
Lj6A253T12 Lonicera japonica
Lj6C241T4 Lonicera japonica
Lj6g0012256 Lotus japonicus
Lj6g0015113 Lotus japonicus
Lj8C179T7 Lonicera japonica
Lsat_1_v5_gn_4_64000 Lactuca sativa
Lsat_1_v5_gn_7_12861 Lactuca sativa
Lsat_1_v5_gn_9_88840 Lactuca sativa
Manes.03G142600 Manihot esculenta
Manes.08G068500 Manihot esculenta
Manes.09G083200 Manihot esculenta
Manes.15G058600 Manihot esculenta
MBI14_g08894_MAGBIO Magnolia biondii
MBI14_g08895_MAGBIO Magnolia biondii
MBI14_g13533_MAGBIO Magnolia biondii
MD03G1029200 Malus domestica
MD05G1362200 Malus domestica
MD10G1339700 Malus domestica
MD11G1032400 Malus domestica
Medtr2g027130 Medicago truncatula
Medtr3g007920 Medicago truncatula
Medtr3g060660 Medicago truncatula
Medtr4g133450 Medicago truncatula
Medtr4g134110 Medicago truncatula
Medtr5g096080 Medicago truncatula
MELO3C014113.2 Cucumis melo
MELO3C026089.2 Cucumis melo
Migut.H01633 Erythranthe guttata
Migut.H01749 Erythranthe guttata
Migut.M01448 Erythranthe guttata
Migut.M01642 Erythranthe guttata
MSTRG.13024 Avicennia marina
MSTRG.14494 Avicennia marina
MSTRG.7004 Avicennia marina
MSTRG.7123 Avicennia marina
Nitab4.5_0000147g0380 Nicotiana tabacum
Nitab4.5_0003692g0050 Nicotiana tabacum
Nitab4.5_0004583g0090 Nicotiana tabacum
Nitab4.5_0006294g0040 Nicotiana tabacum
Nn1g07551 Nelumbo nucifera
Nn1g07767 Nelumbo nucifera
Oeu005481.1 Olea europaea
Oeu005954.1 Olea europaea
Oeu046939.1 Olea europaea
Oeu057017.1 Olea europaea
Os12g0271600 Oryza sativa ssp. japonica
Peaxi162Scf00006g00416 Petunia axillaris
Peaxi162Scf00139g01120 Petunia axillaris
Peaxi162Scf00811g00224 Petunia axillaris
Peaxi162Scf00827g00518 Petunia axillaris
PGR042G0925 Punica granatum
PGR083G1584 Punica granatum
PGSC0003DMG400019747 Solanum tuberosum
PGSC0003DMG400022271 Solanum tuberosum
PGSC0003DMG402013304 Solanum tuberosum
Phvul.003G087700 Phaseolus vulgaris
Phvul.006G058800 Phaseolus vulgaris
Phvul.006G136800 Phaseolus vulgaris
Phvul.008G279900 Phaseolus vulgaris
Potri.001G369200 Populus trichocarpa
Potri.006G004100 Populus trichocarpa
Potri.016G005200 Populus trichocarpa
Prupe.4G003200 Prunus persica
Prupe.6G025300 Prunus persica
Psat0s3798g0080 Pisum sativum
Psat1g172320 Pisum sativum
Psat2g006880 Pisum sativum
Psat5g165560 Pisum sativum
PSO210G4928 Papaver somniferum
PSO210G6911 Papaver somniferum
QL05p066984 Quercus lobata
QL05p067335 Quercus lobata
QL08p003651 Quercus lobata
RcHm_v2.0_Chr5g0000421 Rosa chinensis
RcHm_v2.0_Chr5g0076481 Rosa chinensis
RcHm_v2.0_Chr5g0076551 Rosa chinensis
RcHm_v2.0_Chr5g0076561 Rosa chinensis
RcHm_v2.0_Chr5g0076571 Rosa chinensis
RcHm_v2.0_Chr5g0076581 Rosa chinensis
Rhsim02G0090400 Rhododendron simsii
Rhsim06G0231100 Rhododendron simsii
Rhsim10G0143500 Rhododendron simsii
Rhsim10G0143600 Rhododendron simsii
Rhsim13G0139900 Rhododendron simsii
Sabra06G0003500 Salix brachista
Sabra16G0010100 Salix brachista
Sabra16G0242100 Salix brachista
SalBow1G3015 Salvia bowleyana
SalBow8G5165 Salvia bowleyana
Sc03g0011630 Simmondsia chinensis
Sc05g0009880 Simmondsia chinensis
Sc24g0000430 Simmondsia chinensis
Sc24g0000450 Simmondsia chinensis
Sc24g0000460 Simmondsia chinensis
Sed0000061 Sechium edule
Sed0003258 Sechium edule
Sed0007556 Sechium edule
SEGI_06346 Sequoiadendron giganteum
SEGI_16968 Sequoiadendron giganteum
SEGI_23448 Sequoiadendron giganteum
SEGI_30989 Sequoiadendron giganteum
SEGI_39497 Sequoiadendron giganteum
SGA_v2.0_scaffold42G15974 Striga asiatica
SMO364G0141 Selaginella moellendorffii
Solyc04g015110.3 Solanum lycopersicum
Solyc07g065680.3 Solanum lycopersicum
Sopen04g007130 Solanum pennellii
Sopen07g033890 Solanum pennellii
Sopen11g007530 Solanum pennellii
Sp1g10820 Schrenkiella parvula
Sp6g17740 Schrenkiella parvula
Sp7g17000 Schrenkiella parvula
TAR517G0007 Trochodendron aralioides
TAR517G0008 Trochodendron aralioides
TAR517G0009 Trochodendron aralioides
TAR626G1140 Trochodendron aralioides
THA.LOC104806742 Tarenaya hassleriana
THA.LOC104810293 Tarenaya hassleriana
THA.LOC104811675 Tarenaya hassleriana
THA.LOC104815472 Tarenaya hassleriana
THA.LOC104815691 Tarenaya hassleriana
THA.LOC104817709 Tarenaya hassleriana
Thecc.06G241600 Theobroma cacao
Thecc.07G010300 Theobroma cacao
Thhalv10007286m.g Eutrema salsugineum
Thhalv10012934m.g Eutrema salsugineum
Thhalv10024903m.g Eutrema salsugineum
TPR.G17542 Trifolium pratense
TPR.G24110 Trifolium pratense
TPR.G28318 Trifolium pratense
TPR.G5995 Trifolium pratense
TPR.G8584 Trifolium pratense
TWI38G0190 Tripterygium wilfordii
TWI38G2079 Tripterygium wilfordii
TWI39G0045 Tripterygium wilfordii
TWI63G0386 Tripterygium wilfordii
TWI77G0847 Tripterygium wilfordii
unitig_0.g2012 Utricularia gibba
unitig_26.g9405 Utricularia gibba
unitig_26.g9406 Utricularia gibba
unitig_37.g12175 Utricularia gibba
unitig_37.g12176 Utricularia gibba
vmacro03601 Vaccinium macrocarpon
vmacro11602 Vaccinium macrocarpon
vmacro15728 Vaccinium macrocarpon
VMungo0540G0065 Vigna mungo
VMungo0540G0539 Vigna mungo
VMungo0647G0995 Vigna mungo
VMungo1127G1191 Vigna mungo
VMungo1215G0153 Vigna mungo
Zm00001eb133280 Zea mays
Zm00001eb408590 Zea mays

User provided reference genes

Program Settings