Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p23990 Brassica napus
A04p02250 Brassica napus
A05p03610 Brassica napus
A06p03030 Brassica napus
A07p24560 Brassica napus
A09p51580 Brassica napus
Aa31LG10G13620 Aethionema arabicum
Aa31LG10G3750 Aethionema arabicum
Aa31LG1G24930 Aethionema arabicum
Aa31LG6G11590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3123 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5795 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5651 Anthoceros agrestis
Actinidia00106 Actinidia chinensis
Actinidia05043 Actinidia chinensis
Actinidia32941 Actinidia chinensis
Actinidia32942 Actinidia chinensis
Ah.06g181040 Amaranthus hybridus
AL1G58240 Arabidopsis lyrata
AL4G41780 Arabidopsis lyrata
AL5G41100 Arabidopsis lyrata
AL5G41140 Arabidopsis lyrata
Aqoxy1G00311 Aquilegia oxysepala
Aqoxy1G04043 Aquilegia oxysepala
Aqoxy1G04173 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1Y86Y0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.75Z370 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9H137 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZQ7JRA Arachis hypogaea
AT1G50590 Arabidopsis thaliana
AT2G43120 Arabidopsis thaliana
AT3G59220 Arabidopsis thaliana
AT3G59245 Arabidopsis thaliana
AT3G59260 Arabidopsis thaliana
ATR0609G090 Amborella trichopoda
Atru.chr2.3602 Acer truncatum
Atru.chr3.1679 Acer truncatum
AUR62015930 Chenopodium quinoa
AUR62037111 Chenopodium quinoa
AUR62040679 Chenopodium quinoa
AUR62042876 Chenopodium quinoa
BcaB02g07477 Brassica carinata
BcaB02g08229 Brassica carinata
BcaB07g33492 Brassica carinata
BcaB07g33493 Brassica carinata
BcaC01g05261 Brassica carinata
BcaC02g10048 Brassica carinata
BcaC02g12412 Brassica carinata
BcaC03g14947 Brassica carinata
BcaC07g40317 Brassica carinata
BcaC07g40318 Brassica carinata
BcaC07g40465 Brassica carinata
BcaC07g40466 Brassica carinata
BcaC07g42472 Brassica carinata
BcaC08g43227 Brassica carinata
BcaC08g44966 Brassica carinata
BcaNung03541 Brassica carinata
BolC3t15224H Brassica oleracea
BolC4t22058H Brassica oleracea
BolC4t24916H Brassica oleracea
BolC6t35685H Brassica oleracea
BolC6t37757H Brassica oleracea
BolC8t51033H Brassica oleracea
BolC8t51034H Brassica oleracea
BraA03t11611Z Brassica rapa
BraA04t15955Z Brassica rapa
BraA05t19347Z Brassica rapa
BraA06t23515Z Brassica rapa
BraA07t30101Z Brassica rapa
BraA09t40593Z Brassica rapa
BraA09t40597Z Brassica rapa
C03p28600 Brassica napus
C04p04210 Brassica napus
C04p33510 Brassica napus
C06p05750 Brassica napus
C08p34340 Brassica napus
C08p34350 Brassica napus
CAN.G337.38 Capsicum annuum
CAN.G710.31 Capsicum annuum
CAN.G710.33 Capsicum annuum
CAN.G710.35 Capsicum annuum
CAN.G951.3 Capsicum annuum
CANSAT78G0965 Cannabis sativa
CARHR040620 Cardamine hirsuta
CARHR040630 Cardamine hirsuta
CARHR138190 Cardamine hirsuta
CARHR169610 Cardamine hirsuta
CARHR169640 Cardamine hirsuta
Carub.0001s3963 Capsella rubella
Carub.0004s2560 Capsella rubella
Carub.0005s2594 Capsella rubella
Carub.0005s2599 Capsella rubella
Ca_06360_v3 Cicer arietinum L.
Ca_16247_v3 Cicer arietinum L.
Ca_19700_v3 Cicer arietinum L.
CBR_g31644 Chara braunii
CBR_g32422 Chara braunii
Cc00_g22810 Coffea canephora
Cc00_g34100 Coffea canephora
Cc03_g10350 Coffea canephora
Cc03_g10400 Coffea canephora
Cc03_g10450 Coffea canephora
Cc05_g14540 Coffea canephora
CDE02G0630 Ceratophyllum demersum
CDE04G0211 Ceratophyllum demersum
CDE04G1281 Ceratophyllum demersum
CDE04G1457 Ceratophyllum demersum
CDE04G1866 Ceratophyllum demersum
Cfa008560 Carpinus fangiana
Cfa020246 Carpinus fangiana
Cfa021443 Carpinus fangiana
Ciclev10009028m.g Citrus clementina
Ciclev10021136m.g Citrus clementina
CiPaw.01G107100 Carya illinoinensis
CiPaw.01G107200 Carya illinoinensis
CiPaw.01G107300 Carya illinoinensis
CiPaw.01G107400 Carya illinoinensis
CiPaw.02G058100 Carya illinoinensis
CiPaw.11G199300 Carya illinoinensis
CiPaw.12G135000 Carya illinoinensis
ClCG07G016710 Citrullus lanatus
ClCG09G020980 Citrullus lanatus
ClCG10G004670 Citrullus lanatus
COL.COLO4_07300 Corchorus olitorius
COL.COLO4_09761 Corchorus olitorius
Cpa.g.sc12.210 Carica papaya
Cpa.g.sc90.62 Carica papaya
Cre09.g388208 Chlamydomonas reinhardtii
Cre16.g674964 Chlamydomonas reinhardtii
CsaV3_3G004480 Cucumis sativus L.
CsaV3_4G003840 Cucumis sativus L.
CsaV3_7G018750 Cucumis sativus L.
CSS0004218 Camellia sinensis var. sinensis
CSS0009343 Camellia sinensis var. sinensis
CSS0010018 Camellia sinensis var. sinensis
CSS0010248 Camellia sinensis var. sinensis
CSS0024421 Camellia sinensis var. sinensis
CSS0041942 Camellia sinensis var. sinensis
CSS0043943 Camellia sinensis var. sinensis
CSS0045679 Camellia sinensis var. sinensis
DCAR_000143 Daucus carota
DCAR_004836 Daucus carota
DCAR_004838 Daucus carota
Dinv10296 Davidia involucrata
Dinv22663 Davidia involucrata
Dinv40823 Davidia involucrata
Dinv44232 Davidia involucrata
Duzib151G0262 Durio zibethinus
Duzib212G0412 Durio zibethinus
Duzib213G1003 Durio zibethinus
Duzib268G0131 Durio zibethinus
Duzib268G0348 Durio zibethinus
ECA240G2506 Erigeron canadensis
EL10Ac4g07634 Beta vulgaris
EL10Ac5g11610 Beta vulgaris
Eucgr.A00216 Eucalyptus grandis
Eucgr.F00629 Eucalyptus grandis
Eucgr.F00630 Eucalyptus grandis
FAN07G2900 Fragaria x ananassa
FAN11G2690 Fragaria x ananassa
FAN12G2461 Fragaria x ananassa
FAN12G3441 Fragaria x ananassa
FAN12G3646 Fragaria x ananassa
FAN16G2966 Fragaria x ananassa
FAN22G0319 Fragaria x ananassa
FAN25G1835 Fragaria x ananassa
FvH4_3g23750 Fragaria vesca
FvH4_4g11770 Fragaria vesca
Glyma.02G296500 Glycine max
Glyma.08G324700 Glycine max
Glyma.08G361100 Glycine max
Glyma.14G017000 Glycine max
Glyma.18G085300 Glycine max
Glyma.18G300500 Glycine max
Gohir.A01G085800 Gossypium hirsutum
Gohir.A04G010300 Gossypium hirsutum
Gohir.A10G136000 Gossypium hirsutum
Gohir.D01G072100 Gossypium hirsutum
Gohir.D05G377700 Gossypium hirsutum
Gohir.D10G130600 Gossypium hirsutum
Gorai.002G095100 Gossypium raimondii
Gorai.009G445500 Gossypium raimondii
Gorai.011G144400 Gossypium raimondii
GSVIVG01031671001 Vitis vinifera
GSVIVG01037758001 Vitis vinifera
GSVIVG01038385001 Vitis vinifera
HanXRQChr13g0418751 Helianthus annuus
HanXRQChr17g0546181 Helianthus annuus
HanXRQChr17g0546191 Helianthus annuus
Haze_09770 Corylus avellana
Haze_11063 Corylus avellana
Hma1.2p1_1033F.1_g250220 Hydrangea macrophylla
Hma1.2p1_1199F.1_g266390 Hydrangea macrophylla
Hma1.2p1_3203F.1_g333930 Hydrangea macrophylla
HPP92_017842 Vanilla planifolia
HPP92_020214 Vanilla planifolia
HPP92_020215 Vanilla planifolia
HPP92_020234 Vanilla planifolia
Hund10616 Selenicereus undatus
Hund23165 Selenicereus undatus
Lalb_Chr02g0144501 Lupinus albus
Lalb_Chr06g0164611 Lupinus albus
Lalb_Chr10g0107251 Lupinus albus
Lj1A883T39 Lonicera japonica
Lj1g0004893 Lotus japonicus
Lj8C175T2 Lonicera japonica
LjContig00272g0006957 Lotus japonicus
Lsat_1_v5_gn_3_111920 Lactuca sativa
Lsat_1_v5_gn_7_113021 Lactuca sativa
Manes.03G134500 Manihot esculenta
Manes.04G054400 Manihot esculenta
Manes.11G113600 Manihot esculenta
Manes.15G064600 Manihot esculenta
Mapoly0033s0019 Marchantia polymorpha
Mapoly0050s0008 Marchantia polymorpha
Mapoly0134s0025 Marchantia polymorpha
MBI07_g21335_MAGBIO Magnolia biondii
MCO10G195 Micromonas commoda
MCO11G727 Micromonas commoda
MCO14G321 Micromonas commoda
MCO15G301 Micromonas commoda
MD03G1190300 Malus domestica
MD04G1033300 Malus domestica
MD11G1206900 Malus domestica
Medtr5g094250 Medicago truncatula
Medtr5g094260 Medicago truncatula
Medtr7g405830 Medicago truncatula
MELO3C013100.2 Cucumis melo
MELO3C014144.2 Cucumis melo
MELO3C017671.2 Cucumis melo
Migut.M01691 Erythranthe guttata
Migut.N00435 Erythranthe guttata
MSTRG.14467 Avicennia marina
MSTRG.24607 Avicennia marina
MSTRG.6972 Avicennia marina
Nitab4.5_0001160g0170 Nicotiana tabacum
Nitab4.5_0002051g0010 Nicotiana tabacum
Nitab4.5_0003869g0050 Nicotiana tabacum
Nitab4.5_0004200g0080 Nicotiana tabacum
Nitab4.5_0004200g0090 Nicotiana tabacum
Nitab4.5_0006630g0020 Nicotiana tabacum
Nitab4.5_0006630g0040 Nicotiana tabacum
Nitab4.5_0010102g0070 Nicotiana tabacum
Nn1g07417 Nelumbo nucifera
Nn1g08061 Nelumbo nucifera
Oeu013396.1 Olea europaea
Oeu019624.1 Olea europaea
Oeu029899.1 Olea europaea
Oeu034480.1 Olea europaea
Oeu034545.1 Olea europaea
Oeu034546.1 Olea europaea
Oeu053850.1 Olea europaea
Os03g0845000 Oryza sativa ssp. japonica
Os08g0364900 Oryza sativa ssp. japonica
Os09g0484800 Oryza sativa ssp. japonica
Peaxi162Scf00285g00931 Petunia axillaris
Peaxi162Scf00286g00440 Petunia axillaris
Peaxi162Scf00286g00444 Petunia axillaris
Peaxi162Scf01165g00015 Petunia axillaris
PGR083G1523 Punica granatum
PGR083G2527 Punica granatum
PGSC0003DMG400011902 Solanum tuberosum
PGSC0003DMG400011910 Solanum tuberosum
PGSC0003DMG400012844 Solanum tuberosum
PGSC0003DMG400022193 Solanum tuberosum
Phvul.006G050900 Phaseolus vulgaris
Phvul.008G001900 Phaseolus vulgaris
Phvul.008G274400 Phaseolus vulgaris
Potri.002G231900 Populus trichocarpa
Potri.014G150200 Populus trichocarpa
Pp3c19_20830 Physcomitrium patens
Pp3c21_16130 Physcomitrium patens
Pp3c2_10320 Physcomitrium patens
PRCOL_00005461 Prasinoderma coloniale
PRCOL_00006668 Prasinoderma coloniale
Prupe.1G181100 Prunus persica
Prupe.4G089400 Prunus persica
Prupe.4G229700 Prunus persica
Psat2g010720 Pisum sativum
Psat6g142920 Pisum sativum
PSO170G0790 Papaver somniferum
PSO357G0291 Papaver somniferum
PSO541G4941 Papaver somniferum
PSO675G3791 Papaver somniferum
QL08p008508 Quercus lobata
QL08p008514 Quercus lobata
QL10p046815 Quercus lobata
RcHm_v2.0_Chr4g0409021 Rosa chinensis
RcHm_v2.0_Chr5g0041911 Rosa chinensis
RcHm_v2.0_Chr5g0041961 Rosa chinensis
Rhsim09G0035900 Rhododendron simsii
Sabra02G0177000 Salix brachista
Sabra14G0113800 Salix brachista
SalBow3G2654 Salvia bowleyana
SalBow3G2782 Salvia bowleyana
SalBow8G0877 Salvia bowleyana
Sc07g0007100 Simmondsia chinensis
Sc16g0003520 Simmondsia chinensis
Sed0005017 Sechium edule
Sed0010853 Sechium edule
Sed0019587 Sechium edule
Sed0021464 Sechium edule
SEGI_01395 Sequoiadendron giganteum
SEGI_02799 Sequoiadendron giganteum
SEGI_11265 Sequoiadendron giganteum
SEGI_12956 Sequoiadendron giganteum
SEGI_22671 Sequoiadendron giganteum
SEGI_23229 Sequoiadendron giganteum
SEGI_27635 Sequoiadendron giganteum
SEGI_28243 Sequoiadendron giganteum
SEGI_33610 Sequoiadendron giganteum
SEGI_37393 Sequoiadendron giganteum
SGA_v2.0_scaffold168G38516 Striga asiatica
SGA_v2.0_scaffold290G47323 Striga asiatica
SHI26550 Sapria himalayana
SMO337G0068 Selaginella moellendorffii
Solyc07g065160.4 Solanum lycopersicum
Solyc09g098160.3 Solanum lycopersicum
Solyc09g098180.4 Solanum lycopersicum
Solyc12g014590.3 Solanum lycopersicum
Sopen07g033380 Solanum pennellii
Sopen09g036110 Solanum pennellii
Sopen09g036130 Solanum pennellii
Sopen12g007470 Solanum pennellii
Sp1g37410 Schrenkiella parvula
Sp4g25250 Schrenkiella parvula
Sp5g03850 Schrenkiella parvula
TAR362G0674 Trochodendron aralioides
TAR626G1148 Trochodendron aralioides
TAR626G1867 Trochodendron aralioides
TAR633G1244 Trochodendron aralioides
THA.LOC104802291 Tarenaya hassleriana
THA.LOC104803495 Tarenaya hassleriana
THA.LOC104824210 Tarenaya hassleriana
Thecc.04G181100 Theobroma cacao
Thecc.07G024400 Theobroma cacao
Thhalv10006135m.g Eutrema salsugineum
Thhalv10006431m.g Eutrema salsugineum
Thhalv10011679m.g Eutrema salsugineum
Thhalv10016961m.g Eutrema salsugineum
TPR.G30655 Trifolium pratense
TWI38G0259 Tripterygium wilfordii
TWI38G0413 Tripterygium wilfordii
TWI38G0480 Tripterygium wilfordii
unitig_578.g16340 Utricularia gibba
unitig_746.g26706 Utricularia gibba
vmacro00569 Vaccinium macrocarpon
vmacro11571 Vaccinium macrocarpon
vmacro22721 Vaccinium macrocarpon
VMungo0540G1418 Vigna mungo
VMungo0647G2343 Vigna mungo
VMungo1383G3013 Vigna mungo
Zm00001eb042780 Zea mays
Zm00001eb064350 Zea mays
Zm00001eb316540 Zea mays
Zm00001eb335630 Zea mays
Zm00001eb343300 Zea mays
Zm00001eb343310 Zea mays
Zm00001eb383690 Zea mays

User provided reference genes

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