Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03290 Brassica napus
A06p14330 Brassica napus
A10p23150 Brassica napus
Aa31LG11G13720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1518 Anthoceros agrestis
Actinidia36302 Actinidia chinensis
Ah.16g102200 Amaranthus hybridus
AL6G26760 Arabidopsis lyrata
Aqoxy3G03835 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.315CZB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3M3YVQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.45ZRJE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4YY7HD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7LRQ2C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7RE9A8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8B2PVG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8T7YIA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8TC9YW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.97V9F3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9B6JUI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DBFW6U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DL3V94 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DZLH8R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EF4K39 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FNBU82 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IFR6LF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KTS9L2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MEJ08X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NV11DU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P2QZ5X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P92AWU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PWF5TT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QLZJ2Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R4IVK8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1RP4E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S4QA17 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U10CSY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VNC1H2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4PN6B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WL2BZP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YP35DX Arachis hypogaea
AT1G18310 Arabidopsis thaliana
AT5G15870 Arabidopsis thaliana
ATR0691G035 Amborella trichopoda
Atru.chr8.753 Acer truncatum
AUR62008942 Chenopodium quinoa
AUR62008948 Chenopodium quinoa
AUR62014553 Chenopodium quinoa
AUR62014558 Chenopodium quinoa
AUR62015869 Chenopodium quinoa
AUR62020353 Chenopodium quinoa
BcaB07g31843 Brassica carinata
BcaB08g36867 Brassica carinata
BcaC03g18458 Brassica carinata
BcaC04g18927 Brassica carinata
BcaC04g18928 Brassica carinata
BcaC05g25725 Brassica carinata
BcaNung02211 Brassica carinata
BcaNung02212 Brassica carinata
BolC2t06727H Brassica oleracea
BolC5t30357H Brassica oleracea
BolC9t58961H Brassica oleracea
BraA02t05299Z Brassica rapa
BraA06t24562Z Brassica rapa
BraA10t44384Z Brassica rapa
C02p08050 Brassica napus
C05p16590 Brassica napus
C09p61190 Brassica napus
CAN.G497.11 Capsicum annuum
CAN.G497.12 Capsicum annuum
CAN.G587.14 Capsicum annuum
CANSAT64G2120 Cannabis sativa
CARHR018880 Cardamine hirsuta
CARHR197440 Cardamine hirsuta
Carub.0001s1793 Capsella rubella
Carub.0006s1406 Capsella rubella
Ca_14085_v3 Cicer arietinum L.
Ca_14086_v3 Cicer arietinum L.
Ca_14087_v3 Cicer arietinum L.
Ca_14088_v3 Cicer arietinum L.
Cc07_g04940 Coffea canephora
CDE01G0212 Ceratophyllum demersum
CDE02G2297 Ceratophyllum demersum
CDE04G0002 Ceratophyllum demersum
Cfa007970 Carpinus fangiana
Cfa007971 Carpinus fangiana
Cfa007973 Carpinus fangiana
Cfa007974 Carpinus fangiana
Cfa007977 Carpinus fangiana
Cfa026847 Carpinus fangiana
Ciclev10011145m.g Citrus clementina
CiPaw.03G006300 Carya illinoinensis
CiPaw.04G003900 Carya illinoinensis
CiPaw.04G008900 Carya illinoinensis
ClCG08G001600 Citrullus lanatus
ClCG11G005240 Citrullus lanatus
ClCG11G005250 Citrullus lanatus
COL.COLO4_04273 Corchorus olitorius
Cpa.g.c34602 Carica papaya
Cpa.g.sc179.46 Carica papaya
Cre12.g513400 Chlamydomonas reinhardtii
CsaV3_5G038990 Cucumis sativus L.
CsaV3_5G039000 Cucumis sativus L.
CsaV3_5G039560 Cucumis sativus L.
CSS0001532 Camellia sinensis var. sinensis
CSS0027152 Camellia sinensis var. sinensis
CSS0045064 Camellia sinensis var. sinensis
CSS0047252 Camellia sinensis var. sinensis
DCAR_007522 Daucus carota
DCAR_026275 Daucus carota
Dinv33915 Davidia involucrata
Dinv34865 Davidia involucrata
Duzib133G0789 Durio zibethinus
Duzib138G0609 Durio zibethinus
ECA232G1453 Erigeron canadensis
ECA232G2187 Erigeron canadensis
ECA232G2291 Erigeron canadensis
ECA236G2264 Erigeron canadensis
ECA238G0404 Erigeron canadensis
ECA238G1231 Erigeron canadensis
ECA238G2836 Erigeron canadensis
EL10Ac2g04625 Beta vulgaris
EL10Ac2g04626 Beta vulgaris
EL10Ac2g04630 Beta vulgaris
EL10Ac7g18012 Beta vulgaris
EL10Ac7g18013 Beta vulgaris
EL10Ac7g18014 Beta vulgaris
Eucgr.I02113 Eucalyptus grandis
Eucgr.I02114 Eucalyptus grandis
Eucgr.I02115 Eucalyptus grandis
Eucgr.I02117 Eucalyptus grandis
Eucgr.I02118 Eucalyptus grandis
Eucgr.I02120 Eucalyptus grandis
Eucgr.L01010 Eucalyptus grandis
Eucgr.L01290 Eucalyptus grandis
Eucgr.L01291 Eucalyptus grandis
Eucgr.L01292 Eucalyptus grandis
Eucgr.L01293 Eucalyptus grandis
Eucgr.L01830 Eucalyptus grandis
FAN02G1095 Fragaria x ananassa
FAN02G1233 Fragaria x ananassa
FAN02G1351 Fragaria x ananassa
FAN02G1759 Fragaria x ananassa
FAN02G3796 Fragaria x ananassa
FAN05G4228 Fragaria x ananassa
FAN05G4703 Fragaria x ananassa
FAN05G4799 Fragaria x ananassa
FAN09G2759 Fragaria x ananassa
FAN09G2822 Fragaria x ananassa
FAN09G3115 Fragaria x ananassa
FAN09G4316 Fragaria x ananassa
FAN09G4785 Fragaria x ananassa
FAN14G1785 Fragaria x ananassa
FAN14G2330 Fragaria x ananassa
FAN14G2579 Fragaria x ananassa
FAN19G0270 Fragaria x ananassa
FAN22G2207 Fragaria x ananassa
FvH4_3g44967 Fragaria vesca
FvH4_4g35090 Fragaria vesca
FvH4_6g45580 Fragaria vesca
FvH4_6g47860 Fragaria vesca
FvH4_6g47870 Fragaria vesca
FvH4_6g53160 Fragaria vesca
Glyma.08G245600 Glycine max
Glyma.08G245700 Glycine max
Glyma.08G246000 Glycine max
Glyma.08G246300 Glycine max
Glyma.13G048600 Glycine max
Glyma.13G048700 Glycine max
Glyma.13G048800 Glycine max
Glyma.18G266900 Glycine max
Glyma.18G267100 Glycine max
Glyma.19G043200 Glycine max
Gohir.A07G073100 Gossypium hirsutum
Gohir.A11G318750 Gossypium hirsutum
Gohir.A11G318850 Gossypium hirsutum
Gohir.A11G318900 Gossypium hirsutum
Gohir.D07G077700 Gossypium hirsutum
Gohir.D11G338033 Gossypium hirsutum
Gorai.001G082200 Gossypium raimondii
Gorai.007G368000 Gossypium raimondii
GSVIVG01036466001 Vitis vinifera
HanXRQChr07g0200171 Helianthus annuus
HanXRQChr09g0263431 Helianthus annuus
HanXRQChr14g0452421 Helianthus annuus
Haze_13980 Corylus avellana
Haze_14096 Corylus avellana
Haze_14098 Corylus avellana
Haze_14099 Corylus avellana
Hma1.2p1_0673F.1_g201250 Hydrangea macrophylla
Hma1.2p1_1222F.1_g268200 Hydrangea macrophylla
HPP92_015309 Vanilla planifolia
Hund13764 Selenicereus undatus
Lalb_Chr02g0158381 Lupinus albus
Lalb_Chr02g0158391 Lupinus albus
Lalb_Chr02g0158401 Lupinus albus
Lalb_Chr04g0258421 Lupinus albus
Lalb_Chr10g0092881 Lupinus albus
Lalb_Chr10g0092981 Lupinus albus
Lj1A66T61 Lonicera japonica
Lj1g0003211 Lotus japonicus
Lj1g0004458 Lotus japonicus
Lj2g0015908 Lotus japonicus
Lj2g0018147 Lotus japonicus
Lj2g0024297 Lotus japonicus
Lj3g0003215 Lotus japonicus
Lj4C129T19 Lonicera japonica
Lj4P323T32 Lonicera japonica
Lj4P326T14 Lonicera japonica
Lj8C733T7 Lonicera japonica
Lsat_1_v5_gn_2_86520 Lactuca sativa
Lsat_1_v5_gn_4_175820 Lactuca sativa
Manes.02G065200 Manihot esculenta
Mapoly0056s0080 Marchantia polymorpha
Mapoly0089s0047 Marchantia polymorpha
MBI14_g32577_MAGBIO Magnolia biondii
MD09G1047100 Malus domestica
MD09G1081400 Malus domestica
MD09G1081500 Malus domestica
MD09G1081600 Malus domestica
MD09G1081700 Malus domestica
MD15G1128600 Malus domestica
MD17G1047200 Malus domestica
MD17G1048700 Malus domestica
MD17G1071200 Malus domestica
MD17G1072700 Malus domestica
Medtr1g079270 Medicago truncatula
Medtr1g079320 Medicago truncatula
Medtr4g036905 Medicago truncatula
Medtr6g007700 Medicago truncatula
Medtr6g007703 Medicago truncatula
Medtr6g007713 Medicago truncatula
Medtr6g007717 Medicago truncatula
Medtr6g016785 Medicago truncatula
Medtr6g016790 Medicago truncatula
Medtr6g016795 Medicago truncatula
Medtr6g016800 Medicago truncatula
Medtr6g016810 Medicago truncatula
Medtr6g016820 Medicago truncatula
Medtr6g016840 Medicago truncatula
Medtr6g016845 Medicago truncatula
Medtr6g016855 Medicago truncatula
Medtr6g016860 Medicago truncatula
Medtr6g037090 Medicago truncatula
Medtr7g013170 Medicago truncatula
Medtr7g013810 Medicago truncatula
Medtr7g028445 Medicago truncatula
Medtr7g112730 Medicago truncatula
MELO3C022069.2 Cucumis melo
MELO3C022070.2 Cucumis melo
MELO3C022133.2 Cucumis melo
Migut.H00539 Erythranthe guttata
MSTRG.23831 Avicennia marina
MSTRG.2944 Avicennia marina
Nitab4.5_0000612g0120 Nicotiana tabacum
Nitab4.5_0003161g0020 Nicotiana tabacum
Nitab4.5_0004420g0070 Nicotiana tabacum
Nitab4.5_0007193g0030 Nicotiana tabacum
Nn1g03846 Nelumbo nucifera
Nn4g23647 Nelumbo nucifera
Nn7g37689 Nelumbo nucifera
Oeu033429.1 Olea europaea
Os09g0379900 Oryza sativa ssp. japonica
Peaxi162Scf00479g00033 Petunia axillaris
Peaxi162Scf01056g10028 Petunia axillaris
Peaxi162Scf01056g10029 Petunia axillaris
PGR004G1955 Punica granatum
PGSC0003DMG400018770 Solanum tuberosum
PGSC0003DMG400039856 Solanum tuberosum
PGSC0003DMG400044116 Solanum tuberosum
Phvul.004G049200 Phaseolus vulgaris
Phvul.004G049300 Phaseolus vulgaris
Phvul.004G049400 Phaseolus vulgaris
Phvul.008G033000 Phaseolus vulgaris
Phvul.008G033100 Phaseolus vulgaris
Phvul.008G033200 Phaseolus vulgaris
Potri.004G105300 Populus trichocarpa
Pp3c24_12660 Physcomitrium patens
Prupe.3G242000 Prunus persica
Prupe.3G242100 Prunus persica
Prupe.3G261700 Prunus persica
Prupe.8G191700 Prunus persica
Prupe.8G194600 Prunus persica
Prupe.8G259500 Prunus persica
Psat0s3000g0040 Pisum sativum
Psat0s3000g0160 Pisum sativum
Psat1g062240 Pisum sativum
Psat1g062320 Pisum sativum
Psat1g062360 Pisum sativum
Psat1g062400 Pisum sativum
Psat1g062440 Pisum sativum
Psat1g062520 Pisum sativum
Psat1g062560 Pisum sativum
Psat3g201640 Pisum sativum
Psat3g201680 Pisum sativum
PSO478G0306 Papaver somniferum
QL02p053450 Quercus lobata
QL02p057721 Quercus lobata
RcHm_v2.0_Chr1g0366281 Rosa chinensis
RcHm_v2.0_Chr2g0163531 Rosa chinensis
RcHm_v2.0_Chr2g0163581 Rosa chinensis
RcHm_v2.0_Chr2g0167061 Rosa chinensis
RcHm_v2.0_Chr2g0167071 Rosa chinensis
RcHm_v2.0_Chr3g0490821 Rosa chinensis
RcHm_v2.0_Chr3g0490841 Rosa chinensis
RcHm_v2.0_Chr3g0492161 Rosa chinensis
RcHm_v2.0_Chr3g0492171 Rosa chinensis
RcHm_v2.0_Chr4g0401881 Rosa chinensis
RcHm_v2.0_Chr4g0402161 Rosa chinensis
RcHm_v2.0_Chr4g0408171 Rosa chinensis
RcHm_v2.0_Chr4g0437621 Rosa chinensis
RcHm_v2.0_Chr5g0082551 Rosa chinensis
Rhsim10G0064700 Rhododendron simsii
Rhsim10G0064800 Rhododendron simsii
Sabra04G0076800 Salix brachista
Sc10g0001420 Simmondsia chinensis
Sed0005751 Sechium edule
Sed0027875 Sechium edule
SEGI_24365 Sequoiadendron giganteum
SEGI_34751 Sequoiadendron giganteum
SGA_v2.0_scaffold109G31026 Striga asiatica
SGA_v2.0_scaffold204G41659 Striga asiatica
SGA_v2.0_scaffold469G52052 Striga asiatica
SHI22364 Sapria himalayana
SMO134G0208 Selaginella moellendorffii
SMO143G0260 Selaginella moellendorffii
Solyc02g089720.3 Solanum lycopersicum
Solyc02g089730.1 Solanum lycopersicum
Solyc03g046200.1 Solanum lycopersicum
Sopen02g034440 Solanum pennellii
Sopen02g034450 Solanum pennellii
Sopen03g009630 Solanum pennellii
Sp2g19560 Schrenkiella parvula
Sp6g28240 Schrenkiella parvula
TAR371G0421 Trochodendron aralioides
TAR371G0706 Trochodendron aralioides
TAR629G3299 Trochodendron aralioides
THA.LOC104820968 Tarenaya hassleriana
Thecc.04G144300 Theobroma cacao
Thhalv10003773m.g Eutrema salsugineum
Thhalv10012764m.g Eutrema salsugineum
TPR.G25570 Trifolium pratense
TPR.G40061 Trifolium pratense
TPR.G9652 Trifolium pratense
TPR.G9654 Trifolium pratense
TPR.G9659 Trifolium pratense
TPR.G9660 Trifolium pratense
TPR.G9670 Trifolium pratense
TPR.G9674 Trifolium pratense
TPR.G9676 Trifolium pratense
TPR.G9677 Trifolium pratense
TWI74G1248 Tripterygium wilfordii
unitig_52.g17625 Utricularia gibba
vmacro05583 Vaccinium macrocarpon
VMungo0464G0432 Vigna mungo
VMungo0464G0727 Vigna mungo
VMungo0464G1947 Vigna mungo
VMungo0464G1951 Vigna mungo
VMungo0720G1935 Vigna mungo
VMungo1383G0799 Vigna mungo
VMungo1383G1668 Vigna mungo
VMungo1383G2967 Vigna mungo
Zm00001eb311620 Zea mays
Zm00001eb378380 Zea mays

User provided reference genes

Program Settings