Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21220 Brassica napus
A01p21240 Brassica napus
A03p49770 Brassica napus
A06p03860 Brassica napus
A08p02780 Brassica napus
A08p12240 Brassica napus
Aa31LG10G4550 Aethionema arabicum
Aa31LG2G12440 Aethionema arabicum
Aa31LG8G14970 Aethionema arabicum
Actinidia01445 Actinidia chinensis
Actinidia23513 Actinidia chinensis
Actinidia23515 Actinidia chinensis
Actinidia23516 Actinidia chinensis
Actinidia35737 Actinidia chinensis
Ah.09g233960 Amaranthus hybridus
Ah.14g087420 Amaranthus hybridus
AL1G56580 Arabidopsis lyrata
AL1G58890 Arabidopsis lyrata
AL7G38650 Arabidopsis lyrata
Aqoxy1G04251 Aquilegia oxysepala
Aqoxy4G01882 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.34Y9P3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CMF379 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L21B75 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N21GUB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q4MEBS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RPJ1YH Arachis hypogaea
AT1G49420 Arabidopsis thaliana
AT1G51090 Arabidopsis thaliana
AT4G16380 Arabidopsis thaliana
ATR0624G014 Amborella trichopoda
Atru.chr1.2286 Acer truncatum
Atru.chr2.3724 Acer truncatum
Atru.chr2.3739 Acer truncatum
AUR62021820 Chenopodium quinoa
BcaB04g17203 Brassica carinata
BcaB07g33672 Brassica carinata
BcaC01g01274 Brassica carinata
BcaC06g33475 Brassica carinata
BcaC08g43139 Brassica carinata
BcaC09g50331 Brassica carinata
BcaC09g50333 Brassica carinata
BcaC09g50336 Brassica carinata
BcaNung00203 Brassica carinata
BolC1t02596H Brassica oleracea
BolC1t02597H Brassica oleracea
BolC3t21328H Brassica oleracea
BolC6t35544H Brassica oleracea
BolC7t45305H Brassica oleracea
BolC8t48363H Brassica oleracea
BraA06t23594Z Brassica rapa
BraA08t32313Z Brassica rapa
BraA08t33234Z Brassica rapa
C01p26520 Brassica napus
C01p26550 Brassica napus
C01p26560 Brassica napus
C03p90070 Brassica napus
C06p04220 Brassica napus
C07p47830 Brassica napus
CAN.G1156.11 Capsicum annuum
CAN.G1263.28 Capsicum annuum
CAN.G449.28 Capsicum annuum
CANSAT56G0532 Cannabis sativa
CARHR039430 Cardamine hirsuta
CARHR041110 Cardamine hirsuta
CARHR222750 Cardamine hirsuta
Carub.0001s3862 Capsella rubella
Carub.0001s3999 Capsella rubella
Carub.0001s4000 Capsella rubella
Carub.0007s2515 Capsella rubella
Ca_00757_v3 Cicer arietinum L.
Ca_20999_v3 Cicer arietinum L.
Cc00_g26060 Coffea canephora
Cc03_g07690 Coffea canephora
Cc07_g18170 Coffea canephora
Cc09_g00440 Coffea canephora
Cc09_g00470 Coffea canephora
Cc09_g08340 Coffea canephora
CDE04G1610 Ceratophyllum demersum
Cfa000045 Carpinus fangiana
Ciclev10016401m.g Citrus clementina
Ciclev10017543m.g Citrus clementina
Ciclev10017991m.g Citrus clementina
CiPaw.09G108000 Carya illinoinensis
CiPaw.10G080700 Carya illinoinensis
CiPaw.10G080800 Carya illinoinensis
CiPaw.10G081000 Carya illinoinensis
CiPaw.10G081100 Carya illinoinensis
CiPaw.10G081200 Carya illinoinensis
ClCG01G011010 Citrullus lanatus
ClCG01G021270 Citrullus lanatus
COL.COLO4_31928 Corchorus olitorius
Cpa.g.sc27.240 Carica papaya
CsaV3_1G015440 Cucumis sativus L.
CsaV3_6G048280 Cucumis sativus L.
CSS0000720 Camellia sinensis var. sinensis
CSS0006117 Camellia sinensis var. sinensis
CSS0024411 Camellia sinensis var. sinensis
CSS0032208 Camellia sinensis var. sinensis
CSS0035696 Camellia sinensis var. sinensis
CSS0036445 Camellia sinensis var. sinensis
CSS0039099 Camellia sinensis var. sinensis
CSS0044052 Camellia sinensis var. sinensis
DCAR_002238 Daucus carota
DCAR_030844 Daucus carota
Dinv04401 Davidia involucrata
Dinv15346 Davidia involucrata
Dinv15349 Davidia involucrata
Dinv15352 Davidia involucrata
Dinv15353 Davidia involucrata
Duzib192G0521 Durio zibethinus
Duzib192G0736 Durio zibethinus
Duzib192G0829 Durio zibethinus
Duzib192G0859 Durio zibethinus
Duzib235G0111 Durio zibethinus
ECA234G4050 Erigeron canadensis
ECA246G4676 Erigeron canadensis
ECA247G2176 Erigeron canadensis
EL10Ac8g20254 Beta vulgaris
Eucgr.D01461 Eucalyptus grandis
Eucgr.D01467 Eucalyptus grandis
Eucgr.E03862 Eucalyptus grandis
Eucgr.E03863 Eucalyptus grandis
Eucgr.E03865 Eucalyptus grandis
Eucgr.E03867 Eucalyptus grandis
Eucgr.E03868 Eucalyptus grandis
Eucgr.E03869 Eucalyptus grandis
Eucgr.E03871 Eucalyptus grandis
Eucgr.E03872 Eucalyptus grandis
Eucgr.E03873 Eucalyptus grandis
FAN02G3978 Fragaria x ananassa
FAN03G0520 Fragaria x ananassa
FAN05G0358 Fragaria x ananassa
FAN05G0669 Fragaria x ananassa
FAN05G4551 Fragaria x ananassa
FAN06G3990 Fragaria x ananassa
FAN08G1118 Fragaria x ananassa
FAN08G2964 Fragaria x ananassa
FAN13G2605 Fragaria x ananassa
FAN14G5464 Fragaria x ananassa
FAN15G3701 Fragaria x ananassa
FAN16G3637 Fragaria x ananassa
FAN21G3005 Fragaria x ananassa
FAN24G0943 Fragaria x ananassa
FAN25G0318 Fragaria x ananassa
FAN25G2435 Fragaria x ananassa
FAN25G3651 Fragaria x ananassa
FAN26G1410 Fragaria x ananassa
FAN27G0715 Fragaria x ananassa
FAN27G3366 Fragaria x ananassa
FAN28G0889 Fragaria x ananassa
FvH4_3g00430 Fragaria vesca
FvH4_3g00441 Fragaria vesca
FvH4_3g00443 Fragaria vesca
FvH4_3g00445 Fragaria vesca
Glyma.07G267600 Glycine max
Glyma.09G013700 Glycine max
Glyma.15G118400 Glycine max
Glyma.17G006300 Glycine max
Gohir.A05G175900 Gossypium hirsutum
Gohir.A05G176000 Gossypium hirsutum
Gohir.A06G156500 Gossypium hirsutum
Gohir.A06G156701 Gossypium hirsutum
Gohir.A10G008000 Gossypium hirsutum
Gohir.A10G008100 Gossypium hirsutum
Gohir.D05G178900 Gossypium hirsutum
Gohir.D05G179000 Gossypium hirsutum
Gohir.D05G179050 Gossypium hirsutum
Gohir.D06G162900 Gossypium hirsutum
Gohir.D06G163000 Gossypium hirsutum
Gohir.D10G007900 Gossypium hirsutum
Gorai.009G184400 Gossypium raimondii
Gorai.009G184500 Gossypium raimondii
Gorai.009G184600 Gossypium raimondii
Gorai.010G190100 Gossypium raimondii
Gorai.010G190200 Gossypium raimondii
Gorai.011G008600 Gossypium raimondii
GSVIVG01002490001 Vitis vinifera
GSVIVG01003495001 Vitis vinifera
GSVIVG01003498001 Vitis vinifera
GSVIVG01003499001 Vitis vinifera
GSVIVG01005123001 Vitis vinifera
GSVIVG01005124001 Vitis vinifera
GSVIVG01005128001 Vitis vinifera
GSVIVG01005131001 Vitis vinifera
GSVIVG01006127001 Vitis vinifera
GSVIVG01029956001 Vitis vinifera
HanXRQChr02g0053441 Helianthus annuus
HanXRQChr05g0129061 Helianthus annuus
HanXRQChr16g0515811 Helianthus annuus
HanXRQChr17g0558131 Helianthus annuus
Haze_06996 Corylus avellana
Haze_07008 Corylus avellana
Haze_07009 Corylus avellana
Hma1.2p1_0427F.1_g150650 Hydrangea macrophylla
Hund21118 Selenicereus undatus
Lalb_Chr07g0176941 Lupinus albus
Lalb_Chr15g0088181 Lupinus albus
Lalb_Chr18g0057241 Lupinus albus
Lalb_Chr20g0119511 Lupinus albus
Lj4g0001433 Lotus japonicus
Lj6g0019164 Lotus japonicus
Lsat_1_v5_gn_4_63601 Lactuca sativa
Lsat_1_v5_gn_7_13160 Lactuca sativa
Lsat_1_v5_gn_7_13180 Lactuca sativa
Lsat_1_v5_gn_7_13200 Lactuca sativa
Manes.09G077766 Manihot esculenta
Manes.09G077799 Manihot esculenta
MBI19_g11107_MAGBIO Magnolia biondii
MBI19_g11108_MAGBIO Magnolia biondii
MBI19_g31739_MAGBIO Magnolia biondii
MBI19_g41118_MAGBIO Magnolia biondii
MD05G1360500 Malus domestica
MD08G1234400 Malus domestica
MD10G1337500 Malus domestica
MD10G1337700 Malus domestica
MD10G1337900 Malus domestica
MD10G1338100 Malus domestica
Medtr2g026670 Medicago truncatula
Medtr4g133900 Medicago truncatula
Medtr7g056413 Medicago truncatula
MELO3C008011.2 Cucumis melo
MELO3C026077.2 Cucumis melo
Migut.H01626 Erythranthe guttata
Migut.M01438 Erythranthe guttata
MSTRG.16046 Avicennia marina
MSTRG.16049 Avicennia marina
MSTRG.7125 Avicennia marina
MSTRG.7137 Avicennia marina
MSTRG.7138 Avicennia marina
Nitab4.5_0000147g0290 Nicotiana tabacum
Nitab4.5_0001668g0090 Nicotiana tabacum
Nitab4.5_0001668g0160 Nicotiana tabacum
Nitab4.5_0002478g0050 Nicotiana tabacum
Nitab4.5_0004646g0020 Nicotiana tabacum
Nitab4.5_0007833g0010 Nicotiana tabacum
Nitab4.5_0012809g0020 Nicotiana tabacum
Nn1g03197 Nelumbo nucifera
Nn1g07498 Nelumbo nucifera
Oeu000140.3 Olea europaea
Oeu000141.1 Olea europaea
Oeu002776.1 Olea europaea
Oeu043417.2 Olea europaea
Oeu052841.1 Olea europaea
Oeu052859.1 Olea europaea
Oeu062947.1 Olea europaea
Os03g0412300 Oryza sativa ssp. japonica
Os11g0629100 Oryza sativa ssp. japonica
Peaxi162Scf00008g00033 Petunia axillaris
Peaxi162Scf00576g00126 Petunia axillaris
Peaxi162Scf00811g00012 Petunia axillaris
PGR004G0947 Punica granatum
PGR042G2878 Punica granatum
PGR042G3950 Punica granatum
PGSC0003DMG400008441 Solanum tuberosum
PGSC0003DMG400015010 Solanum tuberosum
Phvul.003G086300 Phaseolus vulgaris
Phvul.006G139900 Phaseolus vulgaris
Potri.006G018400 Populus trichocarpa
Potri.006G018500 Populus trichocarpa
Potri.006G018766 Populus trichocarpa
Potri.006G018901 Populus trichocarpa
Potri.006G019100 Populus trichocarpa
Potri.006G019200 Populus trichocarpa
Potri.006G019300 Populus trichocarpa
Potri.006G019400 Populus trichocarpa
Potri.006G019500 Populus trichocarpa
Potri.006G019600 Populus trichocarpa
Potri.006G019700 Populus trichocarpa
Potri.006G019800 Populus trichocarpa
Potri.006G020000 Populus trichocarpa
Potri.006G020100 Populus trichocarpa
Potri.006G020300 Populus trichocarpa
Potri.006G020500 Populus trichocarpa
Potri.016G006700 Populus trichocarpa
Prupe.4G004900 Prunus persica
Prupe.4G005100 Prunus persica
Psat1g173000 Pisum sativum
Psat3g147320 Pisum sativum
Psat4g002360 Pisum sativum
PSO541G2121 Papaver somniferum
PSO675G8410 Papaver somniferum
QL05p067989 Quercus lobata
QL05p067996 Quercus lobata
QL05p068018 Quercus lobata
QL05p068051 Quercus lobata
QL05p068086 Quercus lobata
QL05p068090 Quercus lobata
QL05p068118 Quercus lobata
RcHm_v2.0_Chr1g0328811 Rosa chinensis
RcHm_v2.0_Chr1g0347291 Rosa chinensis
RcHm_v2.0_Chr1g0347351 Rosa chinensis
RcHm_v2.0_Chr2g0102091 Rosa chinensis
RcHm_v2.0_Chr5g0000621 Rosa chinensis
Rhsim13G0141800 Rhododendron simsii
RhsimUnG0175400 Rhododendron simsii
RhsimUnG0175800 Rhododendron simsii
RhsimUnG0175900 Rhododendron simsii
Sabra06G0013400 Salix brachista
Sabra06G0013500 Salix brachista
Sabra06G0013600 Salix brachista
Sabra06G0013700 Salix brachista
Sabra06G0013800 Salix brachista
Sabra06G0014000 Salix brachista
Sabra16G0011400 Salix brachista
Sabra16G0011500 Salix brachista
SalBow3G3916 Salvia bowleyana
Sc05g0009810 Simmondsia chinensis
Sc24g0000360 Simmondsia chinensis
Sed0004833 Sechium edule
Sed0007136 Sechium edule
Sed0010187 Sechium edule
Sed0015976 Sechium edule
Sed0022522 Sechium edule
Sed0022919 Sechium edule
SGA_v2.0_scaffold49G18226 Striga asiatica
SGA_v2.0_scaffold630G53285 Striga asiatica
SGA_v2.0_scaffold7G03707 Striga asiatica
SGA_v2.0_scaffold89G27532 Striga asiatica
SHI18337 Sapria himalayana
Solyc04g015020.3 Solanum lycopersicum
Solyc05g054210.3 Solanum lycopersicum
Solyc11g012680.3 Solanum lycopersicum
Sopen04g007040 Solanum pennellii
Sopen05g032700 Solanum pennellii
Sopen11g007410 Solanum pennellii
Sp1g36270 Schrenkiella parvula
Sp1g37810 Schrenkiella parvula
TAR375G1050 Trochodendron aralioides
TAR624G0157 Trochodendron aralioides
TAR624G0438 Trochodendron aralioides
TAR624G0736 Trochodendron aralioides
TAR624G0994 Trochodendron aralioides
TAR624G1419 Trochodendron aralioides
THA.LOC104815475 Tarenaya hassleriana
Thecc.06G238900 Theobroma cacao
Thecc.06G239000 Theobroma cacao
Thecc.06G239200 Theobroma cacao
Thecc.06G239400 Theobroma cacao
Thecc.06G239500 Theobroma cacao
Thecc.06G239600 Theobroma cacao
Thhalv10011834m.g Eutrema salsugineum
Thhalv10012208m.g Eutrema salsugineum
Thhalv10026065m.g Eutrema salsugineum
TPR.G10568 Trifolium pratense
TPR.G14526 Trifolium pratense
TPR.G5982 Trifolium pratense
TWI38G0363 Tripterygium wilfordii
TWI38G0564 Tripterygium wilfordii
TWI38G0899 Tripterygium wilfordii
TWI38G1105 Tripterygium wilfordii
TWI63G0580 Tripterygium wilfordii
TWI63G1582 Tripterygium wilfordii
unitig_26.g10038 Utricularia gibba
unitig_62.g23504 Utricularia gibba
unitig_749.g13617 Utricularia gibba
unitig_749.g13686 Utricularia gibba
vmacro03617 Vaccinium macrocarpon
vmacro03619 Vaccinium macrocarpon
VMungo0540G0181 Vigna mungo
VMungo1215G2802 Vigna mungo
Zm00001eb019860 Zea mays
Zm00001eb166490 Zea mays
Zm00001eb327160 Zea mays

User provided reference genes

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