Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p29550 Brassica napus
A06p09240 Brassica napus
A07p01930 Brassica napus
A09p27040 Brassica napus
A09p63890 Brassica napus
Aa31LG11G5190 Aethionema arabicum
Aa31LG1G11330 Aethionema arabicum
Aa31LG1G2280 Aethionema arabicum
Aa31LG9G10360 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3246 Anthoceros agrestis
Actinidia02086 Actinidia chinensis
Actinidia12683 Actinidia chinensis
Actinidia12684 Actinidia chinensis
Actinidia14467 Actinidia chinensis
Actinidia14468 Actinidia chinensis
Actinidia33470 Actinidia chinensis
Ah.05g174220 Amaranthus hybridus
Ah.13g075250 Amaranthus hybridus
AL1G10270 Arabidopsis lyrata
AL1G10310 Arabidopsis lyrata
AL1G23680 Arabidopsis lyrata
AL1G43800 Arabidopsis lyrata
AL6G47030 Arabidopsis lyrata
Aqoxy249s003 Aquilegia oxysepala
Aqoxy249s004 Aquilegia oxysepala
Aqoxy3G04266 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0UPW22 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2C2IG0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4NGD3A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9WLF5R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KVU3ZE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T45VHI Arachis hypogaea
AT1G02010 Arabidopsis thaliana
AT1G12360 Arabidopsis thaliana
AT4G12120 Arabidopsis thaliana
ATR0810G265 Amborella trichopoda
Atru.chr1.1256 Acer truncatum
Atru.chr3.4258 Acer truncatum
Atru.chr5.305 Acer truncatum
Atru.chr9.1439 Acer truncatum
AUR62004212 Chenopodium quinoa
AUR62013636 Chenopodium quinoa
AUR62026871 Chenopodium quinoa
AUR62026872 Chenopodium quinoa
AUR62026873 Chenopodium quinoa
AUR62038961 Chenopodium quinoa
BcaB01g01722 Brassica carinata
BcaB01g02658 Brassica carinata
BcaB08g34281 Brassica carinata
BcaB08g34282 Brassica carinata
BcaC01g04605 Brassica carinata
BcaC04g21202 Brassica carinata
BcaC07g41704 Brassica carinata
BcaC07g42346 Brassica carinata
BolC3t15889H Brassica oleracea
BolC3t15890H Brassica oleracea
BolC8t52283H Brassica oleracea
BolC8t52912H Brassica oleracea
BolC9t56279H Brassica oleracea
BraA03t12149Z Brassica rapa
BraA06t24111Z Brassica rapa
BraA07t27992Z Brassica rapa
BraA09t38275Z Brassica rapa
BraA09t41737Z Brassica rapa
BraA09t42273Z Brassica rapa
BraA09t42274Z Brassica rapa
C03p35800 Brassica napus
C05p10810 Brassica napus
C08p47430 Brassica napus
C08p54000 Brassica napus
C08p54010 Brassica napus
C09p34370 Brassica napus
CAN.G208.19 Capsicum annuum
CAN.G257.65 Capsicum annuum
CAN.G388.18 Capsicum annuum
CAN.G630.70 Capsicum annuum
CAN.G630.74 Capsicum annuum
CANSAT21G1992 Cannabis sativa
CANSAT56G3408 Cannabis sativa
CARHR000350 Cardamine hirsuta
CARHR012650 Cardamine hirsuta
CARHR254060 Cardamine hirsuta
Carub.0001s0022 Capsella rubella
Carub.0001s1202 Capsella rubella
Carub.0006s3130 Capsella rubella
Ca_06689_v3 Cicer arietinum L.
Ca_19911_v3 Cicer arietinum L.
Ca_27915_v3 Cicer arietinum L.
Ca_30662_v3 Cicer arietinum L.
CBR_g31666 Chara braunii
Cc00_g17140 Coffea canephora
Cc02_g23890 Coffea canephora
Cc08_g13280 Coffea canephora
CDE04G0732 Ceratophyllum demersum
CDE09G1443 Ceratophyllum demersum
CDE11G0299 Ceratophyllum demersum
CDE12G0920 Ceratophyllum demersum
Cfa012021 Carpinus fangiana
Cfa025471 Carpinus fangiana
Ciclev10004496m.g Citrus clementina
Ciclev10023931m.g Citrus clementina
Ciclev10027965m.g Citrus clementina
CiPaw.01G262300 Carya illinoinensis
CiPaw.11G147100 Carya illinoinensis
CiPaw.12G104400 Carya illinoinensis
ClCG06G000390 Citrullus lanatus
ClCG06G010120 Citrullus lanatus
ClCG06G010180 Citrullus lanatus
COL.COLO4_12541 Corchorus olitorius
COL.COLO4_12542 Corchorus olitorius
COL.COLO4_23872 Corchorus olitorius
COL.COLO4_29505 Corchorus olitorius
COL.COLO4_31286 Corchorus olitorius
Cpa.g.sc18.110 Carica papaya
Cpa.g.sc29.83 Carica papaya
Cre11.g467699 Chlamydomonas reinhardtii
CsaV3_2G011880 Cucumis sativus L.
CsaV3_2G011890 Cucumis sativus L.
CsaV3_6G006180 Cucumis sativus L.
CSS0000096 Camellia sinensis var. sinensis
CSS0002830 Camellia sinensis var. sinensis
CSS0006647 Camellia sinensis var. sinensis
CSS0009258 Camellia sinensis var. sinensis
CSS0025593 Camellia sinensis var. sinensis
DCAR_006484 Daucus carota
DCAR_006485 Daucus carota
DCAR_008559 Daucus carota
DCAR_021194 Daucus carota
Dinv32373 Davidia involucrata
Dinv37759 Davidia involucrata
Dinv39073 Davidia involucrata
Dinv43709 Davidia involucrata
Duzib068G0441 Durio zibethinus
Duzib084G0293 Durio zibethinus
Duzib133G0723 Durio zibethinus
Duzib205G0857 Durio zibethinus
ECA233G2805 Erigeron canadensis
ECA240G3238 Erigeron canadensis
ECA246G0102 Erigeron canadensis
EL10Ac1g00887 Beta vulgaris
EL10Ac5g12620 Beta vulgaris
Eucgr.D01986 Eucalyptus grandis
Eucgr.E01424 Eucalyptus grandis
FAN01G1187 Fragaria x ananassa
FAN03G2966 Fragaria x ananassa
FAN04G0879 Fragaria x ananassa
FAN06G1054 Fragaria x ananassa
FAN06G1984 Fragaria x ananassa
FAN06G4896 Fragaria x ananassa
FAN08G3408 Fragaria x ananassa
FAN10G3205 Fragaria x ananassa
FAN10G3582 Fragaria x ananassa
FAN13G2543 Fragaria x ananassa
FAN18G0202 Fragaria x ananassa
FAN18G2451 Fragaria x ananassa
FAN24G2286 Fragaria x ananassa
FAN27G3037 Fragaria x ananassa
FAN27G3401 Fragaria x ananassa
FvH4_2g27020 Fragaria vesca
FvH4_5g00770 Fragaria vesca
FvH4_5g29992 Fragaria vesca
FvH4_7g11810 Fragaria vesca
Glyma.01G142600 Glycine max
Glyma.01G212200 Glycine max
Glyma.03G024100 Glycine max
Glyma.05G053100 Glycine max
Glyma.11G029600 Glycine max
Glyma.17G135500 Glycine max
Gohir.A08G134700 Gossypium hirsutum
Gohir.A08G174200 Gossypium hirsutum
Gohir.A12G221300 Gossypium hirsutum
Gohir.D08G155600 Gossypium hirsutum
Gohir.D08G192900 Gossypium hirsutum
Gohir.D12G223700 Gossypium hirsutum
Gorai.004G161800 Gossypium raimondii
Gorai.004G203000 Gossypium raimondii
Gorai.008G239900 Gossypium raimondii
GSVIVG01016199001 Vitis vinifera
GSVIVG01026673001 Vitis vinifera
GSVIVG01027604001 Vitis vinifera
HanXRQChr02g0046241 Helianthus annuus
HanXRQChr03g0093911 Helianthus annuus
HanXRQChr06g0164631 Helianthus annuus
HanXRQChr07g0188651 Helianthus annuus
HanXRQChr16g0532591 Helianthus annuus
HanXRQChr17g0550431 Helianthus annuus
Haze_09047 Corylus avellana
Haze_16811 Corylus avellana
Haze_16812 Corylus avellana
Hma1.2p1_2505F.1_g323440 Hydrangea macrophylla
HPP92_000714 Vanilla planifolia
HPP92_013013 Vanilla planifolia
HPP92_013014 Vanilla planifolia
HPP92_022649 Vanilla planifolia
HPP92_022667 Vanilla planifolia
HPP92_026014 Vanilla planifolia
HPP92_026015 Vanilla planifolia
Hund11562 Selenicereus undatus
Hund14654 Selenicereus undatus
Hund17021 Selenicereus undatus
Hund24715 Selenicereus undatus
Hund24717 Selenicereus undatus
Hund25021 Selenicereus undatus
Hund27344 Selenicereus undatus
Lalb_Chr05g0225361 Lupinus albus
Lalb_Chr07g0189831 Lupinus albus
Lalb_Chr09g0324511 Lupinus albus
Lalb_Chr16g0389611 Lupinus albus
Lj2A207T59 Lonicera japonica
Lj2g0004837 Lotus japonicus
Lj3g0024654 Lotus japonicus
Lj4g0018865 Lotus japonicus
Lj7A529G38 Lonicera japonica
Lj8C254G21 Lonicera japonica
Lsat_1_v5_gn_1_8221 Lactuca sativa
Lsat_1_v5_gn_3_132021 Lactuca sativa
Lsat_1_v5_gn_3_3661 Lactuca sativa
Lsat_1_v5_gn_4_147261 Lactuca sativa
Lsat_1_v5_gn_4_180501 Lactuca sativa
Lsat_1_v5_gn_5_24721 Lactuca sativa
Lsat_1_v5_gn_5_78200 Lactuca sativa
Lsat_1_v5_gn_6_9761 Lactuca sativa
Lsat_1_v5_gn_7_46021 Lactuca sativa
Lsat_1_v5_gn_7_7120 Lactuca sativa
Lsat_1_v5_gn_7_7140 Lactuca sativa
Manes.01G072801 Manihot esculenta
Manes.01G266004 Manihot esculenta
Manes.02G033000 Manihot esculenta
Manes.05G045400 Manihot esculenta
Mapoly0053s0089 Marchantia polymorpha
Mapoly0121s0003 Marchantia polymorpha
MBI04_g25408_MAGBIO Magnolia biondii
MBI04_g35268_MAGBIO Magnolia biondii
MBI04_g35269_MAGBIO Magnolia biondii
MBI06_g05726_MAGBIO Magnolia biondii
MBI07_g17484_MAGBIO Magnolia biondii
MBI09_g41595_MAGBIO Magnolia biondii
MBI12_g34013_MAGBIO Magnolia biondii
MBI13_g10211_MAGBIO Magnolia biondii
MBI18_g35142_MAGBIO Magnolia biondii
MCO06G163 Micromonas commoda
MD04G1079000 Malus domestica
MD06G1073800 Malus domestica
MD07G1121500 Malus domestica
Medtr4g023610 Medicago truncatula
Medtr4g102120 Medicago truncatula
Medtr4g120060 Medicago truncatula
Medtr5g011790 Medicago truncatula
MELO3C020413.2 Cucumis melo
MELO3C022501.2 Cucumis melo
Migut.B01631 Erythranthe guttata
Migut.B01632 Erythranthe guttata
Migut.E01047 Erythranthe guttata
Migut.E01133 Erythranthe guttata
Migut.E01265 Erythranthe guttata
Migut.N01630 Erythranthe guttata
MSTRG.13787 Avicennia marina
MSTRG.17190 Avicennia marina
MSTRG.17196 Avicennia marina
Nitab4.5_0000457g0250 Nicotiana tabacum
Nitab4.5_0003534g0070 Nicotiana tabacum
Nitab4.5_0004917g0050 Nicotiana tabacum
Nitab4.5_0010237g0010 Nicotiana tabacum
Nn1g01248 Nelumbo nucifera
Nn4g26384 Nelumbo nucifera
Oeu017764.1 Olea europaea
Oeu025559.1 Olea europaea
Oeu037917.2 Olea europaea
Oeu064093.1 Olea europaea
Os02g0452500 Oryza sativa ssp. japonica
Os04g0252400 Oryza sativa ssp. japonica
Os06g0135900 Oryza sativa ssp. japonica
Peaxi162Scf00013g03440 Petunia axillaris
Peaxi162Scf00271g00120 Petunia axillaris
PGR031G3789 Punica granatum
PGSC0003DMG400007771 Solanum tuberosum
Phvul.002G059900 Phaseolus vulgaris
Phvul.003G215400 Phaseolus vulgaris
Phvul.010G084300 Phaseolus vulgaris
Potri.001G116900 Populus trichocarpa
Potri.003G115800 Populus trichocarpa
Potri.014G069300 Populus trichocarpa
Pp3c16_570 Physcomitrium patens
Pp3c17_24130 Physcomitrium patens
PRCOL_00007273 Prasinoderma coloniale
Prupe.2G144900 Prunus persica
Prupe.5G080200 Prunus persica
Psat2g179640 Pisum sativum
Psat4g068520 Pisum sativum
Psat7g233520 Pisum sativum
PSO017G4862 Papaver somniferum
PSO063G5438 Papaver somniferum
PSO170G1982 Papaver somniferum
PSO675G0293 Papaver somniferum
PSO675G8346 Papaver somniferum
QL07p021996 Quercus lobata
QL08p016918 Quercus lobata
QL08p052547 Quercus lobata
QL12p015111 Quercus lobata
QL93p0277_0005 Quercus lobata
RcHm_v2.0_Chr1g0350491 Rosa chinensis
RcHm_v2.0_Chr5g0038751 Rosa chinensis
RcHm_v2.0_Chr6g0295901 Rosa chinensis
RcHm_v2.0_Chr7g0201411 Rosa chinensis
Rhsim01G0148400 Rhododendron simsii
Rhsim11G0001200 Rhododendron simsii
Rhsim11G0001400 Rhododendron simsii
Sabra01G0089700 Salix brachista
Sabra03G0080300 Salix brachista
Sabra14G0049000 Salix brachista
SalBow5G2459 Salvia bowleyana
SalBow5G2879 Salvia bowleyana
SalBow5G3146 Salvia bowleyana
Sc22g0000570 Simmondsia chinensis
Sc23g0003560 Simmondsia chinensis
Sed0012324 Sechium edule
Sed0013991 Sechium edule
SEGI_06431 Sequoiadendron giganteum
SEGI_13368 Sequoiadendron giganteum
SEGI_26129 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05578 Striga asiatica
SGA_v2.0_scaffold153G37008 Striga asiatica
SGA_v2.0_scaffold196G40943 Striga asiatica
SHI08188 Sapria himalayana
SMO116G0322 Selaginella moellendorffii
SMO175G0013 Selaginella moellendorffii
Solyc01g091290.4 Solanum lycopersicum
Solyc01g091300.3 Solanum lycopersicum
Solyc08g079520.3 Solanum lycopersicum
Sopen01g037040 Solanum pennellii
Sopen08g027890 Solanum pennellii
Sp1g00290 Schrenkiella parvula
Sp1g10960 Schrenkiella parvula
Sp6g05380 Schrenkiella parvula
TAR374G0201 Trochodendron aralioides
TAR375G0352 Trochodendron aralioides
TAR375G0783 Trochodendron aralioides
TAR636G2272 Trochodendron aralioides
THA.LOC104801480 Tarenaya hassleriana
THA.LOC104806350 Tarenaya hassleriana
THA.LOC104809441 Tarenaya hassleriana
THA.LOC104818382 Tarenaya hassleriana
Thecc.01G376700 Theobroma cacao
Thecc.03G262400 Theobroma cacao
Thecc.08G187300 Theobroma cacao
Thhalv10006989m.g Eutrema salsugineum
Thhalv10007001m.g Eutrema salsugineum
Thhalv10028497m.g Eutrema salsugineum
TPR.G19567 Trifolium pratense
TPR.G37639 Trifolium pratense
TPR.G9859 Trifolium pratense
TWI59G1481 Tripterygium wilfordii
TWI60G1373 Tripterygium wilfordii
TWI81G0120 Tripterygium wilfordii
unitig_749.g13413 Utricularia gibba
unitig_749.g13779 Utricularia gibba
vmacro00224 Vaccinium macrocarpon
vmacro21011 Vaccinium macrocarpon
vmacro21012 Vaccinium macrocarpon
VMungo0331G1928 Vigna mungo
VMungo1215G0247 Vigna mungo
VMungo1215G3007 Vigna mungo
Zm00001eb086800 Zea mays
Zm00001eb377900 Zea mays

User provided reference genes

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