Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01570 Brassica napus
A02p24210 Brassica napus
A02p28720 Brassica napus
A03p05680 Brassica napus
A04p08380 Brassica napus
A04p11000 Brassica napus
A06p09250 Brassica napus
A08p32880 Brassica napus
A10p25250 Brassica napus
Aa31LG3G14710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1944 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.865 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.798 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.803 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1841 Anthoceros agrestis
Actinidia05250 Actinidia chinensis
Actinidia06327 Actinidia chinensis
Actinidia39385 Actinidia chinensis
Ah.02g116210 Amaranthus hybridus
Ah.06g193540 Amaranthus hybridus
Ah.12g058180 Amaranthus hybridus
AL1G23660 Arabidopsis lyrata
AL6G23460 Arabidopsis lyrata
Aqoxy1G00208 Aquilegia oxysepala
Aqoxy7G00640 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.03CHBD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.240DSL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2MPK67 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3G8GKP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EP2IUT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KHE3JK Arachis hypogaea
AT1G12330 Arabidopsis thaliana
AT5G12900 Arabidopsis thaliana
ATR0605G257 Amborella trichopoda
ATR0810G112 Amborella trichopoda
Atru.chr9.1437 Acer truncatum
Atru.chr9.1438 Acer truncatum
AUR62000083 Chenopodium quinoa
AUR62001300 Chenopodium quinoa
AUR62010515 Chenopodium quinoa
AUR62017387 Chenopodium quinoa
AUR62019255 Chenopodium quinoa
AUR62043681 Chenopodium quinoa
BcaB01g05391 Brassica carinata
BcaB01g05392 Brassica carinata
BcaB01g05393 Brassica carinata
BcaB01g05490 Brassica carinata
BcaB03g13193 Brassica carinata
BcaB03g13194 Brassica carinata
BcaB07g31812 Brassica carinata
BcaB08g37020 Brassica carinata
BcaC03g16603 Brassica carinata
BcaC03g16604 Brassica carinata
BcaC04g19168 Brassica carinata
BcaC08g43327 Brassica carinata
BcaNung01187 Brassica carinata
BcaNung03604 Brassica carinata
BolC1t02700H Brassica oleracea
BolC1t02701H Brassica oleracea
BolC2t06524H Brassica oleracea
BolC3t13068H Brassica oleracea
BolC3t13170H Brassica oleracea
BolC5t29684H Brassica oleracea
BolC5t29685H Brassica oleracea
BolC5t29826H Brassica oleracea
BolC8t49166H Brassica oleracea
BolC9t59264H Brassica oleracea
BraA01t03205Z Brassica rapa
BraA02t05137Z Brassica rapa
BraA03t09907Z Brassica rapa
BraA06t24112Z Brassica rapa
BraA08t35210Z Brassica rapa
BraA10t44588Z Brassica rapa
C01p20740 Brassica napus
C02p05790 Brassica napus
C02p44310 Brassica napus
C02p44320 Brassica napus
C03p06640 Brassica napus
C05p09430 Brassica napus
C05p09440 Brassica napus
C05p10820 Brassica napus
C08p15380 Brassica napus
C09p64270 Brassica napus
CAN.G388.53 Capsicum annuum
CAN.G630.78 Capsicum annuum
CANSAT21G0380 Cannabis sativa
CANSAT78G1004 Cannabis sativa
CARHR012630 Cardamine hirsuta
CARHR200540 Cardamine hirsuta
Carub.0001s1200 Capsella rubella
Carub.0006s1109 Capsella rubella
Ca_01276_v3 Cicer arietinum L.
Ca_17240_v3 Cicer arietinum L.
Ca_20581_v3 Cicer arietinum L.
Cc00_g08670 Coffea canephora
Cc08_g13270 Coffea canephora
CDE02G4690 Ceratophyllum demersum
CDE04G0354 Ceratophyllum demersum
CDE04G1148 Ceratophyllum demersum
CDE05G2559 Ceratophyllum demersum
CDE06G1610 Ceratophyllum demersum
CDE07G1233 Ceratophyllum demersum
CDE07G1507 Ceratophyllum demersum
CDE11G0505 Ceratophyllum demersum
CDE12G0615 Ceratophyllum demersum
Cfa009712 Carpinus fangiana
Cfa012020 Carpinus fangiana
Ciclev10014671m.g Citrus clementina
Ciclev10019946m.g Citrus clementina
CiPaw.11G147200 Carya illinoinensis
CiPaw.12G104500 Carya illinoinensis
CiPaw.13G164900 Carya illinoinensis
CiPaw.14G123200 Carya illinoinensis
ClCG01G003620 Citrullus lanatus
ClCG02G023460 Citrullus lanatus
ClCG10G003190 Citrullus lanatus
COL.COLO4_23873 Corchorus olitorius
Cpa.g.sc29.85 Carica papaya
Cpa.g.sc84.96 Carica papaya
CsaV3_3G003230 Cucumis sativus L.
CsaV3_4G024040 Cucumis sativus L.
CsaV3_5G003720 Cucumis sativus L.
CSS0003253 Camellia sinensis var. sinensis
CSS0004813 Camellia sinensis var. sinensis
CSS0019690 Camellia sinensis var. sinensis
CSS0037019 Camellia sinensis var. sinensis
DCAR_000857 Daucus carota
DCAR_002042 Daucus carota
DCAR_005649 Daucus carota
Dinv08047 Davidia involucrata
Dinv08048 Davidia involucrata
Dinv36298 Davidia involucrata
Dinv37760 Davidia involucrata
Dinv39074 Davidia involucrata
Duzib068G0729 Durio zibethinus
Duzib084G1358 Durio zibethinus
Duzib150G1592 Durio zibethinus
Duzib168G0080 Durio zibethinus
Duzib205G2035 Durio zibethinus
ECA233G3770 Erigeron canadensis
ECA246G0683 Erigeron canadensis
EL10Ac4g10312 Beta vulgaris
EL10Ac5g12619 Beta vulgaris
Eucgr.D01987 Eucalyptus grandis
Eucgr.J00807 Eucalyptus grandis
FAN04G2441 Fragaria x ananassa
FAN08G0880 Fragaria x ananassa
FAN11G0364 Fragaria x ananassa
FAN13G0899 Fragaria x ananassa
FAN16G2685 Fragaria x ananassa
FAN18G0073 Fragaria x ananassa
FAN21G3989 Fragaria x ananassa
FAN25G1221 Fragaria x ananassa
FvH4_3g43680 Fragaria vesca
FvH4_5g00760 Fragaria vesca
Glyma.05G241700 Glycine max
Glyma.08G049200 Glycine max
Glyma.11G130700 Glycine max
Glyma.12G055100 Glycine max
Glyma.13G342300 Glycine max
Glyma.15G032100 Glycine max
Gohir.A05G067800 Gossypium hirsutum
Gohir.A08G081000 Gossypium hirsutum
Gohir.A08G173600 Gossypium hirsutum
Gohir.A08G174000 Gossypium hirsutum
Gohir.A12G221200 Gossypium hirsutum
Gohir.D05G070800 Gossypium hirsutum
Gohir.D08G087100 Gossypium hirsutum
Gohir.D08G192700 Gossypium hirsutum
Gohir.D12G223500 Gossypium hirsutum
Gohir.D13G058850 Gossypium hirsutum
Gorai.004G091800 Gossypium raimondii
Gorai.004G202300 Gossypium raimondii
Gorai.004G202800 Gossypium raimondii
Gorai.008G239800 Gossypium raimondii
Gorai.009G071800 Gossypium raimondii
GSVIVG01004907001 Vitis vinifera
GSVIVG01025319001 Vitis vinifera
HanXRQChr02g0056501 Helianthus annuus
HanXRQChr06g0164641 Helianthus annuus
HanXRQChr13g0403911 Helianthus annuus
HanXRQChr17g0550411 Helianthus annuus
Haze_09048 Corylus avellana
Haze_23063 Corylus avellana
Haze_23067 Corylus avellana
Hma1.2p1_0138F.1_g063140 Hydrangea macrophylla
HPP92_018946 Vanilla planifolia
HPP92_020643 Vanilla planifolia
Hund07544 Selenicereus undatus
Hund11563 Selenicereus undatus
Hund22075 Selenicereus undatus
Lalb_Chr03g0026211 Lupinus albus
Lalb_Chr05g0222021 Lupinus albus
Lalb_Chr14g0372231 Lupinus albus
Lalb_Chr14g0372251 Lupinus albus
Lalb_Chr16g0387351 Lupinus albus
Lalb_Chr19g0138211 Lupinus albus
Lalb_Chr22g0352281 Lupinus albus
Lj2P208T15 Lonicera japonica
Lj3g0017840 Lotus japonicus
Lj3g0024246 Lotus japonicus
Lj4g0014037 Lotus japonicus
Lju1319A2T34 Lonicera japonica
Lsat_1_v5_gn_3_3741 Lactuca sativa
Lsat_1_v5_gn_6_50040 Lactuca sativa
Manes.01G073000 Manihot esculenta
Manes.02G033200 Manihot esculenta
Manes.06G168300 Manihot esculenta
Manes.14G013700 Manihot esculenta
Mapoly0118s0022 Marchantia polymorpha
MBI01_g05107_MAGBIO Magnolia biondii
MBI01_g41293_MAGBIO Magnolia biondii
MBI01_g41294_MAGBIO Magnolia biondii
MBI01_g41295_MAGBIO Magnolia biondii
MBI04_g14268_MAGBIO Magnolia biondii
MBI04_g47238_MAGBIO Magnolia biondii
MBI12_g34012_MAGBIO Magnolia biondii
MD00G1200200 Malus domestica
MD04G1079100 Malus domestica
MD11G1021700 Malus domestica
Medtr2g098420 Medicago truncatula
Medtr4g066010 Medicago truncatula
Medtr8g106210 Medicago truncatula
MELO3C005583.2 Cucumis melo
MELO3C013989.2 Cucumis melo
MELO3C014619.2 Cucumis melo
Migut.A00838 Erythranthe guttata
Migut.D00563 Erythranthe guttata
Migut.N02296 Erythranthe guttata
MSTRG.12056 Avicennia marina
MSTRG.12481 Avicennia marina
MSTRG.18407 Avicennia marina
MSTRG.25551 Avicennia marina
Nitab4.5_0000175g0110 Nicotiana tabacum
Nitab4.5_0003069g0030 Nicotiana tabacum
Nitab4.5_0003250g0010 Nicotiana tabacum
Nitab4.5_0003534g0030 Nicotiana tabacum
Nitab4.5_0010237g0050 Nicotiana tabacum
Nitab4.5_0010714g0010 Nicotiana tabacum
Nn1g01115 Nelumbo nucifera
Nn1g01251 Nelumbo nucifera
Nn2g13275 Nelumbo nucifera
Nn2g15529 Nelumbo nucifera
Nn4g26382 Nelumbo nucifera
Nn5g29735 Nelumbo nucifera
Nn5g30969 Nelumbo nucifera
Nn5g30972 Nelumbo nucifera
Nn7g36077 Nelumbo nucifera
Oeu016506.1 Olea europaea
Oeu035707.1 Olea europaea
Oeu043304.1 Olea europaea
Oeu055813.1 Olea europaea
Os03g0249100 Oryza sativa ssp. japonica
Os08g0508100 Oryza sativa ssp. japonica
Os09g0488800 Oryza sativa ssp. japonica
Peaxi162Scf00271g00128 Petunia axillaris
Peaxi162Scf00559g00028 Petunia axillaris
Peaxi162Scf00773g00010 Petunia axillaris
PGR031G3235 Punica granatum
PGR042G3389 Punica granatum
PGR119G1033 Punica granatum
PGSC0003DMG400003956 Solanum tuberosum
PGSC0003DMG400021345 Solanum tuberosum
PGSC0003DMG400031868 Solanum tuberosum
Phvul.002G325000 Phaseolus vulgaris
Phvul.011G057000 Phaseolus vulgaris
Phvul.L011343 Phaseolus vulgaris
Potri.001G016600 Populus trichocarpa
Potri.001G117000 Populus trichocarpa
Potri.003G115700 Populus trichocarpa
Potri.003G210200 Populus trichocarpa
Pp3c10_16960 Physcomitrium patens
Pp3c10_17840 Physcomitrium patens
Pp3c11_17810 Physcomitrium patens
Pp3c12_23990 Physcomitrium patens
Pp3c14_24340 Physcomitrium patens
Pp3c16_17730 Physcomitrium patens
Pp3c17_19170 Physcomitrium patens
Pp3c2_4740 Physcomitrium patens
Pp3c5_18490 Physcomitrium patens
Prupe.5G080100 Prunus persica
Prupe.6G016100 Prunus persica
Psat5g288840 Pisum sativum
Psat7g003800 Pisum sativum
Psat7g213920 Pisum sativum
PSO339G5878 Papaver somniferum
PSO384G5044 Papaver somniferum
PSO478G5243 Papaver somniferum
PSO782G2332 Papaver somniferum
QL01p006043 Quercus lobata
QL05p030002 Quercus lobata
QL08p053426 Quercus lobata
QL12p015057 Quercus lobata
RcHm_v2.0_Chr5g0078341 Rosa chinensis
RcHm_v2.0_Chr7g0201471 Rosa chinensis
Rhsim01G0189700 Rhododendron simsii
Rhsim07G0101100 Rhododendron simsii
Rhsim13G0224900 Rhododendron simsii
Sabra01G0011700 Salix brachista
Sabra01G0089800 Salix brachista
Sabra03G0080200 Salix brachista
Sabra03G0153200 Salix brachista
SalBow1G4538 Salvia bowleyana
SalBow2G0139 Salvia bowleyana
SalBow6G1467 Salvia bowleyana
Sc01g0009200 Simmondsia chinensis
Sc06g0004460 Simmondsia chinensis
Sc09g0000490 Simmondsia chinensis
Sed0002799 Sechium edule
Sed0005661 Sechium edule
Sed0006466 Sechium edule
Sed0023887 Sechium edule
SEGI_00940 Sequoiadendron giganteum
SEGI_37597 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32810 Striga asiatica
SGA_v2.0_scaffold1G00805 Striga asiatica
SGA_v2.0_scaffold3G01548 Striga asiatica
SMO164G0039 Selaginella moellendorffii
Solyc01g014105.1 Solanum lycopersicum
Solyc01g014373.1 Solanum lycopersicum
Solyc08g079510.3 Solanum lycopersicum
Sopen01g002680 Solanum pennellii
Sopen01g008640 Solanum pennellii
Sopen08g027880 Solanum pennellii
Sp1g10950 Schrenkiella parvula
Sp6g31060 Schrenkiella parvula
TAR374G0056 Trochodendron aralioides
TAR375G0535 Trochodendron aralioides
TAR623G0151 Trochodendron aralioides
TAR633G1348 Trochodendron aralioides
TAR636G0679 Trochodendron aralioides
THA.LOC104811156 Tarenaya hassleriana
THA.LOC104818392 Tarenaya hassleriana
Thecc.03G262300 Theobroma cacao
Thecc.09G225300 Theobroma cacao
Thhalv10007416m.g Eutrema salsugineum
Thhalv10013095m.g Eutrema salsugineum
TPR.G11404 Trifolium pratense
TPR.G12740 Trifolium pratense
TPR.G13658 Trifolium pratense
TPR.G19643 Trifolium pratense
TPR.G6882 Trifolium pratense
TWI32G1235 Tripterygium wilfordii
TWI34G1062 Tripterygium wilfordii
TWI60G0377 Tripterygium wilfordii
TWI60G1441 Tripterygium wilfordii
TWI81G0909 Tripterygium wilfordii
unitig_21.g20532 Utricularia gibba
unitig_22.g5482 Utricularia gibba
unitig_699.g19124 Utricularia gibba
unitig_744.g24321 Utricularia gibba
unitig_8.g3901 Utricularia gibba
vmacro04175 Vaccinium macrocarpon
vmacro12712 Vaccinium macrocarpon
vmacro14039 Vaccinium macrocarpon
VMungo0606G0001 Vigna mungo
VMungo1080G1551 Vigna mungo
VMungo1127G1325 Vigna mungo
Zm00001eb010660 Zea mays
Zm00001eb034970 Zea mays
Zm00001eb101900 Zea mays
Zm00001eb199840 Zea mays
Zm00001eb316710 Zea mays
Zm00001eb398600 Zea mays

User provided reference genes

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