Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p33800 Brassica napus
Aa31LG5G15100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3405 Anthoceros agrestis
Actinidia18365 Actinidia chinensis
Actinidia21163 Actinidia chinensis
Actinidia21164 Actinidia chinensis
Actinidia21165 Actinidia chinensis
Actinidia21166 Actinidia chinensis
Actinidia21167 Actinidia chinensis
Actinidia30879 Actinidia chinensis
Ah.06g192110 Amaranthus hybridus
AL3G14790 Arabidopsis lyrata
Aqoxy2G03554 Aquilegia oxysepala
Aqoxy2G03555 Aquilegia oxysepala
Aqoxy2G03556 Aquilegia oxysepala
Aqoxy2G03731 Aquilegia oxysepala
Aqoxy2G03732 Aquilegia oxysepala
Aqoxy3G02736 Aquilegia oxysepala
Aqoxy3G03319 Aquilegia oxysepala
Aqoxy4G01760 Aquilegia oxysepala
Aqoxy505s001 Aquilegia oxysepala
Aqoxy5G00331 Aquilegia oxysepala
Aqoxy5G00332 Aquilegia oxysepala
Aqoxy7G03203 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JN9GN2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K1HEIP Arachis hypogaea
AT3G04710 Arabidopsis thaliana
ATR0665G154 Amborella trichopoda
Atru.chr2.837 Acer truncatum
AUR62001052 Chenopodium quinoa
AUR62004900 Chenopodium quinoa
AUR62011929 Chenopodium quinoa
AUR62011930 Chenopodium quinoa
AUR62032244 Chenopodium quinoa
AUR62032245 Chenopodium quinoa
BcaB01g00858 Brassica carinata
BcaB04g19305 Brassica carinata
BcaB04g21349 Brassica carinata
BcaC01g00159 Brassica carinata
BcaC01g04353 Brassica carinata
BcaC03g16286 Brassica carinata
BcaC05g25403 Brassica carinata
BcaC09g47780 Brassica carinata
BNapus_Darmor_BZH_scaffold_78p00990 Brassica napus
BolC1t01159H Brassica oleracea
BolC2t10099H Brassica oleracea
BolC5t30026H Brassica oleracea
BolC5t31927H Brassica oleracea
BraA01t04507Z Brassica rapa
BraA03t12554Z Brassica rapa
C01p11840 Brassica napus
C02p40820 Brassica napus
C03p41100 Brassica napus
C04p32670 Brassica napus
C05p12810 Brassica napus
C09p67110 Brassica napus
CAN.G134.77 Capsicum annuum
CAN.G134.81 Capsicum annuum
CAN.G134.82 Capsicum annuum
CAN.G134.83 Capsicum annuum
CAN.G906.6 Capsicum annuum
CANSAT54G0997 Cannabis sativa
CARHR078940 Cardamine hirsuta
Carub.0002s1030 Capsella rubella
Carub.0003s0386 Capsella rubella
Ca_09427_v3 Cicer arietinum L.
CBR_g50831 Chara braunii
Cc01_g18750 Coffea canephora
Cc02_g30810 Coffea canephora
CDE06G0784 Ceratophyllum demersum
CDE07G0642 Ceratophyllum demersum
Cfa006403 Carpinus fangiana
Cfa026679 Carpinus fangiana
Ciclev10028402m.g Citrus clementina
CiPaw.07G068600 Carya illinoinensis
ClCG02G016750 Citrullus lanatus
COL.COLO4_02759 Corchorus olitorius
COL.COLO4_03560 Corchorus olitorius
COL.COLO4_05094 Corchorus olitorius
COL.COLO4_05095 Corchorus olitorius
COL.COLO4_08282 Corchorus olitorius
COL.COLO4_08283 Corchorus olitorius
COL.COLO4_08284 Corchorus olitorius
COL.COLO4_08285 Corchorus olitorius
COL.COLO4_15370 Corchorus olitorius
Cpa.g.sc617.3 Carica papaya
Cre13.g573550 Chlamydomonas reinhardtii
Cre17.g720700 Chlamydomonas reinhardtii
CsaV3_2G003990 Cucumis sativus L.
CSS0005239 Camellia sinensis var. sinensis
CSS0012748 Camellia sinensis var. sinensis
CSS0016190 Camellia sinensis var. sinensis
DCAR_006649 Daucus carota
Dinv20290 Davidia involucrata
Dinv34576 Davidia involucrata
Duzib128G1133 Durio zibethinus
Duzib133G0491 Durio zibethinus
Duzib138G0187 Durio zibethinus
Duzib177G0999 Durio zibethinus
ECA238G2814 Erigeron canadensis
EL10Ac4g09088 Beta vulgaris
EL10Ac5g10456 Beta vulgaris
Eucgr.H04321 Eucalyptus grandis
FAN02G1989 Fragaria x ananassa
FAN08G0358 Fragaria x ananassa
FAN09G2804 Fragaria x ananassa
FvH4_6g02680 Fragaria vesca
Glyma.03G247600 Glycine max
Glyma.19G245700 Glycine max
Gohir.A13G169500 Gossypium hirsutum
Gohir.D13G175000 Gossypium hirsutum
Gorai.013G200300 Gossypium raimondii
GSVIVG01036270001 Vitis vinifera
HanXRQChr14g0446601 Helianthus annuus
Haze_04373 Corylus avellana
Haze_04374 Corylus avellana
HPP92_009631 Vanilla planifolia
Hund02888 Selenicereus undatus
Lalb_Chr18g0043931 Lupinus albus
Lj1g0007033 Lotus japonicus
Lj2A1158T42 Lonicera japonica
Lj7C210T5 Lonicera japonica
Lju50C34T11 Lonicera japonica
Lsat_1_v5_gn_2_64421 Lactuca sativa
Manes.05G085300 Manihot esculenta
Manes.05G085350 Manihot esculenta
Manes.05G085400 Manihot esculenta
Manes.08G136000 Manihot esculenta
Manes.09G151500 Manihot esculenta
Mapoly0028s0042 Marchantia polymorpha
MBI11_g36864_MAGBIO Magnolia biondii
MCO03G506 Micromonas commoda
MCO05G197 Micromonas commoda
MCO05G324 Micromonas commoda
MCO10G049 Micromonas commoda
MCO15G306 Micromonas commoda
MD04G1226000 Malus domestica
MD12G1243100 Malus domestica
Medtr7g115280 Medicago truncatula
MELO3C004392.2 Cucumis melo
Migut.B01098 Erythranthe guttata
Migut.D00382 Erythranthe guttata
Migut.D00383 Erythranthe guttata
Migut.D00384 Erythranthe guttata
MSTRG.20457 Avicennia marina
Nitab4.5_0006088g0040 Nicotiana tabacum
Nitab4.5_0009495g0030 Nicotiana tabacum
Nn1g02587 Nelumbo nucifera
Nn1g02591 Nelumbo nucifera
Oeu016446.1 Olea europaea
Os01g0171100 Oryza sativa ssp. japonica
Os01g0175400 Oryza sativa ssp. japonica
Os01g0188900 Oryza sativa ssp. japonica
Os01g0189100 Oryza sativa ssp. japonica
Os01g0189700 Oryza sativa ssp. japonica
Os02g0491900 Oryza sativa ssp. japonica
Os02g0492000 Oryza sativa ssp. japonica
Os02g0492600 Oryza sativa ssp. japonica
Os02g0492900 Oryza sativa ssp. japonica
Os02g0493050 Oryza sativa ssp. japonica
Os02g0493300 Oryza sativa ssp. japonica
Os02g0494000 Oryza sativa ssp. japonica
Os02g0494400 Oryza sativa ssp. japonica
Os03g0621400 Oryza sativa ssp. japonica
Os03g0679800 Oryza sativa ssp. japonica
Os03g0680100 Oryza sativa ssp. japonica
Os03g0680200 Oryza sativa ssp. japonica
Os03g0680300 Oryza sativa ssp. japonica
Os03g0680400 Oryza sativa ssp. japonica
Os03g0680500 Oryza sativa ssp. japonica
Os03g0680566 Oryza sativa ssp. japonica
Os03g0680600 Oryza sativa ssp. japonica
Os05g0103600 Oryza sativa ssp. japonica
Os08g0233400 Oryza sativa ssp. japonica
Os08g0325267 Oryza sativa ssp. japonica
Os09g0123500 Oryza sativa ssp. japonica
Os09g0124100 Oryza sativa ssp. japonica
Os09g0124232 Oryza sativa ssp. japonica
Os09g0124800 Oryza sativa ssp. japonica
Os12g0599900 Oryza sativa ssp. japonica
Os12g0600100 Oryza sativa ssp. japonica
Os12g0634900 Oryza sativa ssp. japonica
Os12g0636100 Oryza sativa ssp. japonica
Peaxi162Scf00282g00618 Petunia axillaris
Peaxi162Scf00533g00068 Petunia axillaris
Peaxi162Scf03278g00003 Petunia axillaris
PGR004G2017 Punica granatum
PGSC0003DMG400019459 Solanum tuberosum
PGSC0003DMG400019460 Solanum tuberosum
PGSC0003DMG400027510 Solanum tuberosum
PGSC0003DMG400038646 Solanum tuberosum
Phvul.006G102400 Phaseolus vulgaris
Potri.005G054800 Populus trichocarpa
Potri.005G219201 Populus trichocarpa
Potri.013G042300 Populus trichocarpa
Pp3c26_10740 Physcomitrium patens
Pp3c4_24490 Physcomitrium patens
PRCOL_00001121 Prasinoderma coloniale
PRCOL_00003869 Prasinoderma coloniale
PRCOL_00004439 Prasinoderma coloniale
PRCOL_00007018 Prasinoderma coloniale
Prupe.6G344800 Prunus persica
Psat0s1144g0080 Pisum sativum
Psat0s1144g0120 Pisum sativum
Psat4g049680 Pisum sativum
PSO017G0041 Papaver somniferum
PSO017G0437 Papaver somniferum
PSO017G0677 Papaver somniferum
PSO017G2415 Papaver somniferum
PSO017G2708 Papaver somniferum
PSO017G2802 Papaver somniferum
PSO017G4288 Papaver somniferum
PSO017G4312 Papaver somniferum
PSO017G4575 Papaver somniferum
PSO017G4820 Papaver somniferum
PSO017G5894 Papaver somniferum
PSO017G6319 Papaver somniferum
PSO017G7195 Papaver somniferum
PSO063G0240 Papaver somniferum
PSO063G3110 Papaver somniferum
PSO063G3205 Papaver somniferum
PSO063G3347 Papaver somniferum
PSO063G5539 Papaver somniferum
PSO063G6555 Papaver somniferum
PSO063G7083 Papaver somniferum
PSO081G0105 Papaver somniferum
PSO170G0197 Papaver somniferum
PSO170G2114 Papaver somniferum
PSO170G3022 Papaver somniferum
PSO170G3495 Papaver somniferum
PSO170G3535 Papaver somniferum
PSO170G3794 Papaver somniferum
PSO170G6267 Papaver somniferum
PSO210G1126 Papaver somniferum
PSO210G2423 Papaver somniferum
PSO210G6779 Papaver somniferum
PSO339G0875 Papaver somniferum
PSO339G0965 Papaver somniferum
PSO339G1265 Papaver somniferum
PSO339G3442 Papaver somniferum
PSO339G5673 Papaver somniferum
PSO339G6309 Papaver somniferum
PSO384G0184 Papaver somniferum
PSO384G1410 Papaver somniferum
PSO384G2359 Papaver somniferum
PSO384G2589 Papaver somniferum
PSO384G4611 Papaver somniferum
PSO421G0436 Papaver somniferum
PSO461G0078 Papaver somniferum
PSO478G0068 Papaver somniferum
PSO478G3394 Papaver somniferum
PSO478G3814 Papaver somniferum
PSO478G4273 Papaver somniferum
PSO478G4963 Papaver somniferum
PSO541G5496 Papaver somniferum
PSO591G0168 Papaver somniferum
PSO591G0302 Papaver somniferum
PSO591G0460 Papaver somniferum
PSO675G1254 Papaver somniferum
PSO675G1691 Papaver somniferum
PSO675G1802 Papaver somniferum
PSO675G2171 Papaver somniferum
PSO675G2205 Papaver somniferum
PSO675G2336 Papaver somniferum
PSO675G2350 Papaver somniferum
PSO675G2689 Papaver somniferum
PSO675G2961 Papaver somniferum
PSO675G3161 Papaver somniferum
PSO675G3889 Papaver somniferum
PSO675G4438 Papaver somniferum
PSO675G5049 Papaver somniferum
PSO675G5813 Papaver somniferum
PSO675G6681 Papaver somniferum
PSO675G6771 Papaver somniferum
PSO675G7026 Papaver somniferum
PSO675G7101 Papaver somniferum
PSO675G7970 Papaver somniferum
PSO675G8957 Papaver somniferum
PSO675G9018 Papaver somniferum
PSO724G1144 Papaver somniferum
PSO729G0047 Papaver somniferum
PSO729G0190 Papaver somniferum
PSO782G0719 Papaver somniferum
PSO782G1762 Papaver somniferum
PSO782G4460 Papaver somniferum
PSO782G4634 Papaver somniferum
PSO832G0440 Papaver somniferum
PSO832G3911 Papaver somniferum
QL01p000284 Quercus lobata
QL12p018052 Quercus lobata
RcHm_v2.0_Chr3g0450651 Rosa chinensis
Rhsim01G0268600 Rhododendron simsii
Rhsim01G0268700 Rhododendron simsii
Rhsim01G0268800 Rhododendron simsii
Rhsim05G0163100 Rhododendron simsii
Rhsim05G0163200 Rhododendron simsii
Rhsim05G0163300 Rhododendron simsii
Rhsim05G0163400 Rhododendron simsii
Rhsim07G0074300 Rhododendron simsii
Sabra05G0047600 Salix brachista
Sabra05G0168200 Salix brachista
SalBow1G3168 Salvia bowleyana
SalBow2G0365 Salvia bowleyana
SalBow4G0100 Salvia bowleyana
SalBow4G0281 Salvia bowleyana
SalBow4G0844 Salvia bowleyana
SalBow4G1357 Salvia bowleyana
SalBow4G2090 Salvia bowleyana
SalBow4G2706 Salvia bowleyana
SalBow4G2708 Salvia bowleyana
SalBow4G2812 Salvia bowleyana
SalBow4G2964 Salvia bowleyana
SalBow4G2988 Salvia bowleyana
SalBow6G4950 Salvia bowleyana
SalBow6G5439 Salvia bowleyana
SalBow6G6302 Salvia bowleyana
SalBow7G3954 Salvia bowleyana
SalBow8G1668 Salvia bowleyana
SalBow8G2035 Salvia bowleyana
Sc15g0002530 Simmondsia chinensis
Sed0022842 Sechium edule
SEGI_21200 Sequoiadendron giganteum
SGA_v2.0_scaffold199G41171 Striga asiatica
SGA_v2.0_scaffold199G41172 Striga asiatica
SGA_v2.0_scaffold1G00567 Striga asiatica
SGA_v2.0_scaffold227G43188 Striga asiatica
SGA_v2.0_scaffold36G14395 Striga asiatica
Solyc01g097190.4 Solanum lycopersicum
Solyc01g097200.1 Solanum lycopersicum
Solyc01g097220.3 Solanum lycopersicum
Sopen01g040860 Solanum pennellii
Sopen01g040870 Solanum pennellii
Sopen01g040880 Solanum pennellii
Sopen01g040890 Solanum pennellii
Sp3g03550 Schrenkiella parvula
TAR365G0302 Trochodendron aralioides
TAR636G0648 Trochodendron aralioides
THA.LOC104821668 Tarenaya hassleriana
Thecc.05G281000 Theobroma cacao
Thhalv10020698m.g Eutrema salsugineum
TPR.G1004 Trifolium pratense
TPR.G7003 Trifolium pratense
TWI56G1124 Tripterygium wilfordii
unitig_37.g12638 Utricularia gibba
vmacro03413 Vaccinium macrocarpon
vmacro07946 Vaccinium macrocarpon
vmacro10657 Vaccinium macrocarpon
vmacro13812 Vaccinium macrocarpon
vmacro14172 Vaccinium macrocarpon
vmacro14832 Vaccinium macrocarpon
vmacro14863 Vaccinium macrocarpon
vmacro17118 Vaccinium macrocarpon
VMungo0343G0001 Vigna mungo
VMungo0540G0629 Vigna mungo
VMungo1309G1460 Vigna mungo
Zm00001eb031110 Zea mays
Zm00001eb032790 Zea mays
Zm00001eb034120 Zea mays
Zm00001eb050780 Zea mays
Zm00001eb051920 Zea mays
Zm00001eb178130 Zea mays
Zm00001eb210160 Zea mays
Zm00001eb308940 Zea mays
Zm00001eb356200 Zea mays
Zm00001eb405740 Zea mays

User provided reference genes

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