Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p46690 Brassica napus
Aa31LG9G5180 Aethionema arabicum
Aa31LG9G7750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2573 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2576 Anthoceros agrestis
Actinidia01233 Actinidia chinensis
Actinidia01234 Actinidia chinensis
Actinidia04242 Actinidia chinensis
Actinidia09832 Actinidia chinensis
Actinidia12627 Actinidia chinensis
Actinidia12628 Actinidia chinensis
Actinidia21615 Actinidia chinensis
Actinidia21913 Actinidia chinensis
Actinidia30333 Actinidia chinensis
Ah.14g078670 Amaranthus hybridus
AL5G31750 Arabidopsis lyrata
AL8G13520 Arabidopsis lyrata
AL8G26530 Arabidopsis lyrata
AL8G26540 Arabidopsis lyrata
Aqoxy4G00508 Aquilegia oxysepala
Aqoxy7G03539 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5S904D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6Y3UBL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8YJ5TP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M8SWBU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.STSP6P Arachis hypogaea
AT3G51325 Arabidopsis thaliana
AT5G45290 Arabidopsis thaliana
AT5G52150 Arabidopsis thaliana
AT5G52155 Arabidopsis thaliana
ATR0568G100 Amborella trichopoda
Atru.chr6.2141 Acer truncatum
Atru.chr7.237 Acer truncatum
AUR62010503 Chenopodium quinoa
AUR62011263 Chenopodium quinoa
AUR62017397 Chenopodium quinoa
AUR62041443 Chenopodium quinoa
BcaB01g00528 Brassica carinata
BcaC06g31561 Brassica carinata
BcaC06g34448 Brassica carinata
BcaNung05389 Brassica carinata
BcaNung06302 Brassica carinata
BolC7t43374H Brassica oleracea
BolC8t50275H Brassica oleracea
BraA01t01672Z Brassica rapa
BraA06t27541Z Brassica rapa
BraA09t39899Z Brassica rapa
C07p28340 Brassica napus
C08p26610 Brassica napus
CANSAT01G0016 Cannabis sativa
CANSAT11G2321 Cannabis sativa
CANSAT35G1009 Cannabis sativa
CARHR160910 Cardamine hirsuta
CARHR176850 Cardamine hirsuta
Carub.0005s1770 Capsella rubella
Carub.0008s0286 Capsella rubella
Ca_21617_v3 Cicer arietinum L.
Ca_22469_v3 Cicer arietinum L.
Ca_24931_v3 Cicer arietinum L.
Ca_25064_v3 Cicer arietinum L.
CBR_g84881 Chara braunii
Cc02_g25570 Coffea canephora
Cc06_g07470 Coffea canephora
Cc07_g11160 Coffea canephora
Cc08_g04610 Coffea canephora
CDE06G1697 Ceratophyllum demersum
Cfa007015 Carpinus fangiana
Cfa012632 Carpinus fangiana
Cfa020898 Carpinus fangiana
Ciclev10000893m.g Citrus clementina
Ciclev10007967m.g Citrus clementina
Ciclev10027145m.g Citrus clementina
Ciclev10033401m.g Citrus clementina
CiPaw.07G061700 Carya illinoinensis
CiPaw.11G077400 Carya illinoinensis
CiPaw.12G053400 Carya illinoinensis
CiPaw.15G183000 Carya illinoinensis
ClCG06G011980 Citrullus lanatus
ClCG07G011180 Citrullus lanatus
ClCG10G000530 Citrullus lanatus
COL.COLO4_16730 Corchorus olitorius
COL.COLO4_22475 Corchorus olitorius
COL.COLO4_24112 Corchorus olitorius
Cpa.g.sc24.54 Carica papaya
Cpa.g.sc46.83 Carica papaya
Cre16.g649833 Chlamydomonas reinhardtii
CsaV3_1G028450 Cucumis sativus L.
CsaV3_3G000610 Cucumis sativus L.
CsaV3_4G007070 Cucumis sativus L.
CSS0002920 Camellia sinensis var. sinensis
CSS0010233 Camellia sinensis var. sinensis
CSS0010785 Camellia sinensis var. sinensis
CSS0018906 Camellia sinensis var. sinensis
CSS0021828 Camellia sinensis var. sinensis
CSS0026936 Camellia sinensis var. sinensis
CSS0028105 Camellia sinensis var. sinensis
CSS0031767 Camellia sinensis var. sinensis
CSS0040080 Camellia sinensis var. sinensis
CSS0045678 Camellia sinensis var. sinensis
CSS0046807 Camellia sinensis var. sinensis
CSS0047621 Camellia sinensis var. sinensis
CSS0049069 Camellia sinensis var. sinensis
DCAR_014042 Daucus carota
DCAR_020902 Daucus carota
DCAR_020903 Daucus carota
DCAR_030947 Daucus carota
Dinv09422 Davidia involucrata
Dinv37445 Davidia involucrata
Dinv41429 Davidia involucrata
Dinv42918 Davidia involucrata
Dinv42919 Davidia involucrata
Dinv43181 Davidia involucrata
Dinv43182 Davidia involucrata
Dinv44026 Davidia involucrata
Duzib068G1340 Durio zibethinus
Duzib147G0848 Durio zibethinus
Duzib150G0892 Durio zibethinus
Duzib168G2395 Durio zibethinus
Duzib205G1614 Durio zibethinus
ECA236G1299 Erigeron canadensis
ECA240G1879 Erigeron canadensis
EL10Ac5g12604 Beta vulgaris
EL10Ac8g18825 Beta vulgaris
Eucgr.C04089 Eucalyptus grandis
Eucgr.D02574 Eucalyptus grandis
FAN04G2563 Fragaria x ananassa
FAN08G2077 Fragaria x ananassa
FAN13G0610 Fragaria x ananassa
FAN13G1086 Fragaria x ananassa
FAN13G1529 Fragaria x ananassa
FAN18G0495 Fragaria x ananassa
FAN19G2821 Fragaria x ananassa
FAN19G3099 Fragaria x ananassa
FAN23G0031 Fragaria x ananassa
FAN23G0392 Fragaria x ananassa
FAN26G1059 Fragaria x ananassa
FAN26G2614 Fragaria x ananassa
FAN28G0912 Fragaria x ananassa
FAN28G2191 Fragaria x ananassa
FvH4_1g01770 Fragaria vesca
FvH4_1g11280 Fragaria vesca
FvH4_5g24480 Fragaria vesca
Glyma.01G151700 Glycine max
Glyma.09G216900 Glycine max
Glyma.13G165500 Glycine max
Glyma.16G076000 Glycine max
Glyma.16G107700 Glycine max
Glyma.17G105500 Glycine max
Gohir.1Z049813 Gossypium hirsutum
Gohir.1Z049896 Gossypium hirsutum
Gohir.A02G173100 Gossypium hirsutum
Gohir.A03G000009 Gossypium hirsutum
Gohir.A04G148300 Gossypium hirsutum
Gohir.A06G050400 Gossypium hirsutum
Gohir.A08G148000 Gossypium hirsutum
Gohir.A08G237400 Gossypium hirsutum
Gohir.D03G006800 Gossypium hirsutum
Gohir.D06G049700 Gossypium hirsutum
Gohir.D06G220600 Gossypium hirsutum
Gohir.D07G124401 Gossypium hirsutum
Gohir.D08G169200 Gossypium hirsutum
Gohir.D08G258000 Gossypium hirsutum
Gohir.D12G000700 Gossypium hirsutum
Gorai.002G000400 Gossypium raimondii
Gorai.003G007100 Gossypium raimondii
Gorai.003G187500 Gossypium raimondii
Gorai.004G176400 Gossypium raimondii
Gorai.004G275100 Gossypium raimondii
Gorai.010G000100 Gossypium raimondii
Gorai.010G056600 Gossypium raimondii
GSVIVG01012888001 Vitis vinifera
GSVIVG01036912001 Vitis vinifera
HanXRQChr03g0082781 Helianthus annuus
HanXRQChr06g0168291 Helianthus annuus
HanXRQChr13g0413221 Helianthus annuus
Haze_03716 Corylus avellana
Haze_08034 Corylus avellana
Haze_19342 Corylus avellana
Hma1.2p1_0182F.1_g080420 Hydrangea macrophylla
Hma1.2p1_0262F.1_g105213 Hydrangea macrophylla
Hma1.2p1_0294F.1_g116460 Hydrangea macrophylla
Hma1.2p1_1969F.1_g309500 Hydrangea macrophylla
HPP92_002553 Vanilla planifolia
HPP92_015132 Vanilla planifolia
HPP92_020733 Vanilla planifolia
Hund09320 Selenicereus undatus
Hund14314 Selenicereus undatus
Lalb_Chr09g0325111 Lupinus albus
Lalb_Chr12g0198491 Lupinus albus
Lalb_Chr13g0301211 Lupinus albus
Lalb_Chr16g0380521 Lupinus albus
Lj2g0013343 Lotus japonicus
Lj4g0022620 Lotus japonicus
Lj8C369T4 Lonicera japonica
Lj9A707G51 Lonicera japonica
Lsat_1_v5_gn_4_145121 Lactuca sativa
Lsat_1_v5_gn_6_74361 Lactuca sativa
Lsat_1_v5_gn_7_11921 Lactuca sativa
Manes.05G058100 Manihot esculenta
Manes.06G041400 Manihot esculenta
Manes.14G138100 Manihot esculenta
Manes.17G002200 Manihot esculenta
Mapoly0043s0048 Marchantia polymorpha
Mapoly0101s0029 Marchantia polymorpha
MBI15_g30249_MAGBIO Magnolia biondii
MBI19_g15079_MAGBIO Magnolia biondii
MCO07G361 Micromonas commoda
MCO15G153 Micromonas commoda
MD02G1013400 Malus domestica
MD02G1125300 Malus domestica
MD06G1013000 Malus domestica
MD15G1160200 Malus domestica
MD16G1287000 Malus domestica
Medtr4g116460 Medicago truncatula
Medtr5g022770 Medicago truncatula
Medtr5g026260 Medicago truncatula
Medtr8g072020 Medicago truncatula
Medtr8g091560 Medicago truncatula
MELO3C010268.2 Cucumis melo
MELO3C013749.2 Cucumis melo
MELO3C016212.2 Cucumis melo
Migut.A00487 Erythranthe guttata
Migut.K00384 Erythranthe guttata
Migut.N01718 Erythranthe guttata
MSTRG.11845 Avicennia marina
MSTRG.25757 Avicennia marina
MSTRG.26321 Avicennia marina
Nitab4.5_0000623g0050 Nicotiana tabacum
Nitab4.5_0001021g0130 Nicotiana tabacum
Nitab4.5_0001555g0070 Nicotiana tabacum
Nitab4.5_0005064g0020 Nicotiana tabacum
Nitab4.5_0007008g0010 Nicotiana tabacum
Nitab4.5_0007434g0030 Nicotiana tabacum
Nn1g05803 Nelumbo nucifera
Nn1g09324 Nelumbo nucifera
Nn2g12229 Nelumbo nucifera
Nn3g19165 Nelumbo nucifera
Nn5g30801 Nelumbo nucifera
Nn8g39707 Nelumbo nucifera
Oeu018162.1 Olea europaea
Oeu024394.1 Olea europaea
Oeu039765.1 Olea europaea
Oeu048468.1 Olea europaea
Oeu051708.1 Olea europaea
Oeu055920.1 Olea europaea
Os02g0798600 Oryza sativa ssp. japonica
Os04g0243700 Oryza sativa ssp. japonica
Os05g0389600 Oryza sativa ssp. japonica
Peaxi162Scf00014g01720 Petunia axillaris
Peaxi162Scf00391g00112 Petunia axillaris
Peaxi162Scf01845g00008 Petunia axillaris
PGR031G1520 Punica granatum
PGR102G3058 Punica granatum
PGSC0003DMG400020819 Solanum tuberosum
PGSC0003DMG400030695 Solanum tuberosum
PGSC0003DMG401001720 Solanum tuberosum
Phvul.002G123800 Phaseolus vulgaris
Phvul.003G174300 Phaseolus vulgaris
Phvul.003G277700 Phaseolus vulgaris
Phvul.010G062700 Phaseolus vulgaris
Potri.001G127100 Populus trichocarpa
Potri.002G140500 Populus trichocarpa
Potri.003G106600 Populus trichocarpa
Potri.006G190500 Populus trichocarpa
Potri.014G053500 Populus trichocarpa
Potri.018G114700 Populus trichocarpa
Pp3c1_170 Physcomitrium patens
Pp3c25_15200 Physcomitrium patens
Pp3c2_28540 Physcomitrium patens
PRCOL_00003863 Prasinoderma coloniale
Prupe.2G055300 Prunus persica
Prupe.2G117000 Prunus persica
Prupe.5G015800 Prunus persica
Prupe.7G255200 Prunus persica
Psat2g144280 Pisum sativum
Psat2g152600 Pisum sativum
Psat4g033440 Pisum sativum
Psat4g108480 Pisum sativum
Psat7g052800 Pisum sativum
PSO063G4066 Papaver somniferum
PSO384G2145 Papaver somniferum
PSO782G3288 Papaver somniferum
QL02p065565 Quercus lobata
QL02p091165 Quercus lobata
QL04p026302 Quercus lobata
QL06p050644 Quercus lobata
QL08p057036 Quercus lobata
QL93p0249_0035 Quercus lobata
RcHm_v2.0_Chr2g0086731 Rosa chinensis
RcHm_v2.0_Chr2g0098751 Rosa chinensis
RcHm_v2.0_Chr7g0205181 Rosa chinensis
RcHm_v2.0_Chr7g0205221 Rosa chinensis
RcHm_v2.0_Chr7g0214911 Rosa chinensis
Rhsim01G0052300 Rhododendron simsii
Rhsim01G0126500 Rhododendron simsii
Rhsim01G0143100 Rhododendron simsii
Rhsim05G0209500 Rhododendron simsii
Rhsim07G0141300 Rhododendron simsii
Rhsim10G0207500 Rhododendron simsii
Rhsim13G0145000 Rhododendron simsii
RhsimUnG0191300 Rhododendron simsii
Sabra01G0098000 Salix brachista
Sabra03G0073400 Salix brachista
Sabra18G0097600 Salix brachista
Sc07g0008150 Simmondsia chinensis
Sc08g0005720 Simmondsia chinensis
Sc14g0000070 Simmondsia chinensis
Sed0006824 Sechium edule
Sed0011927 Sechium edule
Sed0015190 Sechium edule
Sed0019605 Sechium edule
SEGI_07537 Sequoiadendron giganteum
SEGI_20297 Sequoiadendron giganteum
SEGI_22547 Sequoiadendron giganteum
SEGI_29895 Sequoiadendron giganteum
SEGI_32697 Sequoiadendron giganteum
SEGI_35279 Sequoiadendron giganteum
SGA_v2.0_scaffold183G39869 Striga asiatica
SGA_v2.0_scaffold89G27359 Striga asiatica
SMO144G0077 Selaginella moellendorffii
SMO169G0262 Selaginella moellendorffii
Solyc01g088640.4 Solanum lycopersicum
Solyc07g007200.4 Solanum lycopersicum
Solyc08g075080.3 Solanum lycopersicum
Sopen01g035490 Solanum pennellii
Sopen07g003250 Solanum pennellii
Sopen08g023710 Solanum pennellii
Sp2g10020 Schrenkiella parvula
Sp2g10230 Schrenkiella parvula
Sp5g10900 Schrenkiella parvula
Sp6g14390 Schrenkiella parvula
TAR383G0731 Trochodendron aralioides
TAR625G0975 Trochodendron aralioides
TAR626G1981 Trochodendron aralioides
TAR629G1808 Trochodendron aralioides
TAR636G1754 Trochodendron aralioides
THA.LOC104806204 Tarenaya hassleriana
THA.LOC104812893 Tarenaya hassleriana
THA.LOC104815393 Tarenaya hassleriana
THA.LOC109117002 Tarenaya hassleriana
Thecc.01G013400 Theobroma cacao
Thecc.03G322000 Theobroma cacao
Thecc.09G141100 Theobroma cacao
Thhalv10000852m.g Eutrema salsugineum
TPR.G10513 Trifolium pratense
TPR.G15772 Trifolium pratense
TPR.G16795 Trifolium pratense
TPR.G2210 Trifolium pratense
TPR.G30317 Trifolium pratense
TWI32G0519 Tripterygium wilfordii
TWI34G0943 Tripterygium wilfordii
TWI60G1341 Tripterygium wilfordii
TWI63G1506 Tripterygium wilfordii
TWI73G0768 Tripterygium wilfordii
unitig_32.g10955 Utricularia gibba
vmacro00111 Vaccinium macrocarpon
vmacro10497 Vaccinium macrocarpon
vmacro21077 Vaccinium macrocarpon
vmacro21885 Vaccinium macrocarpon
vmacro22199 Vaccinium macrocarpon
VMungo0251G2978 Vigna mungo
VMungo1215G0692 Vigna mungo
Zm00001eb087090 Zea mays
Zm00001eb192250 Zea mays
Zm00001eb257960 Zea mays
Zm00001eb287150 Zea mays
Zm00001eb350790 Zea mays

User provided reference genes

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