Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08990 Brassica napus
A01p37940 Brassica napus
A02p39600 Brassica napus
A03p58580 Brassica napus
A03p58630 Brassica napus
A04p13240 Brassica napus
A06p36380 Brassica napus
A07p00570 Brassica napus
A08p19900 Brassica napus
A09p06090 Brassica napus
Aa31LG11G4800 Aethionema arabicum
Aa31LG2G21330 Aethionema arabicum
Aa31LG8G17070 Aethionema arabicum
Aa31LG8G3290 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2686 Anthoceros agrestis
Actinidia07406 Actinidia chinensis
Actinidia09430 Actinidia chinensis
Actinidia13319 Actinidia chinensis
Actinidia20388 Actinidia chinensis
Actinidia31232 Actinidia chinensis
Actinidia32674 Actinidia chinensis
Actinidia32726 Actinidia chinensis
Ah.14g082350 Amaranthus hybridus
Ah.16g105360 Amaranthus hybridus
AL3G28840 Arabidopsis lyrata
AL3G47970 Arabidopsis lyrata
AL6G37650 Arabidopsis lyrata
AL7G23460 Arabidopsis lyrata
Aqoxy7G01584 Aquilegia oxysepala
Aqoxy7G03825 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3BD8CQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.549WES Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9CNE94 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I31YLB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WG7QK5 Arachis hypogaea
AT2G20110 Arabidopsis thaliana
AT3G16160 Arabidopsis thaliana
AT4G29000 Arabidopsis thaliana
AT5G25790 Arabidopsis thaliana
ATR0315G136 Amborella trichopoda
Atru.chr1.3344 Acer truncatum
Atru.chr7.1370 Acer truncatum
Atru.chr7.2141 Acer truncatum
AUR62009310 Chenopodium quinoa
AUR62010953 Chenopodium quinoa
AUR62021466 Chenopodium quinoa
AUR62029664 Chenopodium quinoa
AUR62041724 Chenopodium quinoa
BcaB03g12589 Brassica carinata
BcaB03g16808 Brassica carinata
BcaB04g19767 Brassica carinata
BcaB06g25709 Brassica carinata
BcaB07g29981 Brassica carinata
BcaC06g36691 Brassica carinata
BcaC07g38362 Brassica carinata
BcaC09g51676 Brassica carinata
BcaNung00441 Brassica carinata
BcaNung01338 Brassica carinata
BcaNung02892 Brassica carinata
BcaNung03926 Brassica carinata
BcaNung04841 Brassica carinata
BolC1t01016H Brassica oleracea
BolC1t04780H Brassica oleracea
BolC2t11998H Brassica oleracea
BolC7t40539H Brassica oleracea
BolC7t44744H Brassica oleracea
BolC7t46135H Brassica oleracea
BolC8t48779H Brassica oleracea
BolC9t53591H Brassica oleracea
BraA01t03854Z Brassica rapa
BraA03t14918Z Brassica rapa
BraA03t14923Z Brassica rapa
BraA04t16982Z Brassica rapa
BraA06t26561Z Brassica rapa
BraA07t27853Z Brassica rapa
BraA08t33947Z Brassica rapa
BraA09t36251Z Brassica rapa
C01p10530 Brassica napus
C01p48160 Brassica napus
C02p59360 Brassica napus
C07p01020 Brassica napus
C07p42130 Brassica napus
C07p56570 Brassica napus
C08p11100 Brassica napus
C09p06700 Brassica napus
CAN.G1774.12 Capsicum annuum
CANSAT02G0003 Cannabis sativa
CANSAT56G4377 Cannabis sativa
CARHR091320 Cardamine hirsuta
CARHR110620 Cardamine hirsuta
CARHR110630 Cardamine hirsuta
CARHR187630 Cardamine hirsuta
CARHR236730 Cardamine hirsuta
Carub.0003s1590 Capsella rubella
Carub.0003s3438 Capsella rubella
Carub.0006s2356 Capsella rubella
Carub.0007s1164 Capsella rubella
Ca_15609_v3 Cicer arietinum L.
Ca_17327_v3 Cicer arietinum L.
Ca_20228_v3 Cicer arietinum L.
CBR_g41354 Chara braunii
Cc04_g03010 Coffea canephora
Cc06_g09920 Coffea canephora
Cc08_g09180 Coffea canephora
CDE05G0307 Ceratophyllum demersum
CDE05G2249 Ceratophyllum demersum
CDE05G2495 Ceratophyllum demersum
Cfa003236 Carpinus fangiana
Cfa013351 Carpinus fangiana
Ciclev10007737m.g Citrus clementina
Ciclev10007795m.g Citrus clementina
CiPaw.03G229200 Carya illinoinensis
CiPaw.04G162700 Carya illinoinensis
CiPaw.07G205900 Carya illinoinensis
ClCG06G008750 Citrullus lanatus
ClCG11G002370 Citrullus lanatus
COL.COLO4_18678 Corchorus olitorius
COL.COLO4_30439 Corchorus olitorius
COL.COLO4_34824 Corchorus olitorius
COL.COLO4_34825 Corchorus olitorius
Cpa.g.sc23.80 Carica papaya
Cpa.g.sc23.81 Carica papaya
Cpa.g.sc23.84 Carica papaya
Cpa.g.sc7.253 Carica papaya
Cre08.g361400 Chlamydomonas reinhardtii
Cre11.g481800 Chlamydomonas reinhardtii
CsaV3_1G045720 Cucumis sativus L.
CsaV3_2G002160 Cucumis sativus L.
CSS0001030 Camellia sinensis var. sinensis
CSS0006155 Camellia sinensis var. sinensis
CSS0011206 Camellia sinensis var. sinensis
CSS0012107 Camellia sinensis var. sinensis
CSS0016045 Camellia sinensis var. sinensis
CSS0026251 Camellia sinensis var. sinensis
CSS0026707 Camellia sinensis var. sinensis
CSS0046187 Camellia sinensis var. sinensis
DCAR_004490 Daucus carota
DCAR_004491 Daucus carota
DCAR_023063 Daucus carota
DCAR_028697 Daucus carota
Dinv14241 Davidia involucrata
Dinv30266 Davidia involucrata
Dinv36655 Davidia involucrata
Dinv38017 Davidia involucrata
Dinv41623 Davidia involucrata
Duzib150G0851 Durio zibethinus
Duzib168G0347 Durio zibethinus
Duzib168G0730 Durio zibethinus
Duzib187G1031 Durio zibethinus
ECA240G4062 Erigeron canadensis
EL10Ac2g04052 Beta vulgaris
EL10Ac8g18443 Beta vulgaris
Eucgr.C01266 Eucalyptus grandis
Eucgr.C02900 Eucalyptus grandis
FAN19G1104 Fragaria x ananassa
FAN20G2742 Fragaria x ananassa
FAN23G1238 Fragaria x ananassa
FAN26G2851 Fragaria x ananassa
FAN28G2425 Fragaria x ananassa
FvH4_1g04340 Fragaria vesca
FvH4_1g26750 Fragaria vesca
FvH4_2g35890 Fragaria vesca
Glyma.04G081700 Glycine max
Glyma.05G229900 Glycine max
Glyma.06G083400 Glycine max
Glyma.07G085300 Glycine max
Glyma.08G037400 Glycine max
Glyma.09G191600 Glycine max
Gohir.A05G024300 Gossypium hirsutum
Gohir.A06G064200 Gossypium hirsutum
Gohir.A06G094200 Gossypium hirsutum
Gohir.A07G005200 Gossypium hirsutum
Gohir.A10G081500 Gossypium hirsutum
Gohir.D05G025800 Gossypium hirsutum
Gohir.D06G062800 Gossypium hirsutum
Gohir.D06G093800 Gossypium hirsutum
Gohir.D07G006900 Gossypium hirsutum
Gohir.D10G069900 Gossypium hirsutum
Gorai.001G006500 Gossypium raimondii
Gorai.009G025900 Gossypium raimondii
Gorai.010G073200 Gossypium raimondii
Gorai.010G108300 Gossypium raimondii
Gorai.011G074200 Gossypium raimondii
GSVIVG01015363001 Vitis vinifera
GSVIVG01035652001 Vitis vinifera
HanXRQChr05g0143121 Helianthus annuus
HanXRQChr06g0179211 Helianthus annuus
Haze_16355 Corylus avellana
Haze_16356 Corylus avellana
Haze_21870 Corylus avellana
Haze_25770 Corylus avellana
Hma1.2p1_0590F.1_g184990 Hydrangea macrophylla
Hma1.2p1_1151F.1_g261960 Hydrangea macrophylla
HPP92_020197 Vanilla planifolia
HPP92_021509 Vanilla planifolia
HPP92_021510 Vanilla planifolia
HPP92_021676 Vanilla planifolia
HPP92_021677 Vanilla planifolia
Hund19531 Selenicereus undatus
Hund26224 Selenicereus undatus
Lalb_Chr05g0222991 Lupinus albus
Lalb_Chr08g0243181 Lupinus albus
Lalb_Chr14g0371611 Lupinus albus
Lalb_Chr16g0388091 Lupinus albus
Lalb_Chr16g0388101 Lupinus albus
Lalb_Chr16g0388111 Lupinus albus
Lalb_Chr24g0397511 Lupinus albus
Lalb_Chr24g0397521 Lupinus albus
Lj1g0027837 Lotus japonicus
Lj2g0010550 Lotus japonicus
Lj4C435T2 Lonicera japonica
Lj4C456G5 Lonicera japonica
Lj4C456G6 Lonicera japonica
Lj4g0026624 Lotus japonicus
Lj7A705T28 Lonicera japonica
Lj7C655T8 Lonicera japonica
Lsat_1_v5_gn_7_42100 Lactuca sativa
Lsat_1_v5_gn_8_105060 Lactuca sativa
Manes.03G023000 Manihot esculenta
Manes.03G062000 Manihot esculenta
Manes.16G071700 Manihot esculenta
Manes.16G113800 Manihot esculenta
Mapoly0038s0096 Marchantia polymorpha
MBI01_g30744_MAGBIO Magnolia biondii
MBI01_g43681_MAGBIO Magnolia biondii
MBI04_g19179_MAGBIO Magnolia biondii
MBI14_g17748_MAGBIO Magnolia biondii
MCO03G422 Micromonas commoda
MD02G1043000 Malus domestica
MD08G1116500 Malus domestica
MD15G1096100 Malus domestica
MD15G1181800 Malus domestica
Medtr3g110122 Medicago truncatula
Medtr6g087590 Medicago truncatula
Medtr8g103320 Medicago truncatula
MELO3C004566.2 Cucumis melo
MELO3C024686.2 Cucumis melo
Migut.A00224 Erythranthe guttata
Migut.E00808 Erythranthe guttata
Migut.K00502 Erythranthe guttata
MSTRG.11707 Avicennia marina
MSTRG.19575 Avicennia marina
MSTRG.6010 Avicennia marina
Nitab4.5_0000097g0040 Nicotiana tabacum
Nitab4.5_0003733g0040 Nicotiana tabacum
Nitab4.5_0004391g0040 Nicotiana tabacum
Nitab4.5_0005761g0110 Nicotiana tabacum
Nitab4.5_0007626g0010 Nicotiana tabacum
Nitab4.5_0007626g0020 Nicotiana tabacum
Nitab4.5_0018710g0010 Nicotiana tabacum
Nn2g11678 Nelumbo nucifera
Nn3g18097 Nelumbo nucifera
Oeu002247.1 Olea europaea
Oeu008295.1 Olea europaea
Oeu008296.1 Olea europaea
Oeu018439.2 Olea europaea
Oeu060208.1 Olea europaea
Oeu060210.1 Olea europaea
Os01g0761100 Oryza sativa ssp. japonica
Os02g0274600 Oryza sativa ssp. japonica
Os06g0332700 Oryza sativa ssp. japonica
Os08g0363900 Oryza sativa ssp. japonica
Os08g0369600 Oryza sativa ssp. japonica
Peaxi162Scf00231g00335 Petunia axillaris
Peaxi162Scf01363g00033 Petunia axillaris
Peaxi162Scf01363g00034 Petunia axillaris
PGR142G3402 Punica granatum
PGSC0003DMG400018910 Solanum tuberosum
PGSC0003DMG401000306 Solanum tuberosum
PGSC0003DMG402000306 Solanum tuberosum
Phvul.002G312004 Phaseolus vulgaris
Phvul.002G312100 Phaseolus vulgaris
Phvul.004G164700 Phaseolus vulgaris
Phvul.009G107401 Phaseolus vulgaris
Phvul.009G107501 Phaseolus vulgaris
Potri.001G184800 Populus trichocarpa
Potri.003G052150 Populus trichocarpa
Potri.006G160400 Populus trichocarpa
Potri.018G039300 Populus trichocarpa
Potri.018G083000 Populus trichocarpa
Pp3c20_23080 Physcomitrium patens
Pp3c20_9210 Physcomitrium patens
Pp3c23_7680 Physcomitrium patens
PRCOL_00000447 Prasinoderma coloniale
PRCOL_00005835 Prasinoderma coloniale
Prupe.1G451000 Prunus persica
Prupe.7G233800 Prunus persica
Psat1g043480 Pisum sativum
Psat5g023480 Pisum sativum
Psat7g015200 Pisum sativum
PSO210G3411 Papaver somniferum
PSO210G6079 Papaver somniferum
PSO384G2179 Papaver somniferum
PSO566G0077 Papaver somniferum
PSO566G0205 Papaver somniferum
PSO782G0870 Papaver somniferum
QL02p045836 Quercus lobata
QL05p021596 Quercus lobata
QL12p029489 Quercus lobata
RcHm_v2.0_Chr2g0089991 Rosa chinensis
RcHm_v2.0_Chr6g0305931 Rosa chinensis
Rhsim01G0100700 Rhododendron simsii
Rhsim03G0240100 Rhododendron simsii
Rhsim08G0223800 Rhododendron simsii
Sabra01G0155300 Salix brachista
Sabra06G0124100 Salix brachista
Sabra18G0039400 Salix brachista
Sabra18G0070800 Salix brachista
Sc08g0007640 Simmondsia chinensis
Sc09g0009190 Simmondsia chinensis
Sed0004736 Sechium edule
Sed0009271 Sechium edule
SEGI_14914 Sequoiadendron giganteum
SEGI_33671 Sequoiadendron giganteum
SEGI_37636 Sequoiadendron giganteum
SGA_v2.0_scaffold129G34147 Striga asiatica
SGA_v2.0_scaffold19G08763 Striga asiatica
SGA_v2.0_scaffold520G52689 Striga asiatica
SHI02733 Sapria himalayana
SMO137G0297 Selaginella moellendorffii
SMO196G0171 Selaginella moellendorffii
Solyc07g020710.3 Solanum lycopersicum
Solyc12g007180.2 Solanum lycopersicum
Solyc12g007190.2 Solanum lycopersicum
Sopen07g008660 Solanum pennellii
Sopen12g003170 Solanum pennellii
Sp2g21840 Schrenkiella parvula
Sp3g14520 Schrenkiella parvula
Sp3g33400 Schrenkiella parvula
Sp7g26940 Schrenkiella parvula
TAR383G0343 Trochodendron aralioides
TAR626G1043 Trochodendron aralioides
TAR636G1673 Trochodendron aralioides
THA.LOC104804023 Tarenaya hassleriana
THA.LOC104814714 Tarenaya hassleriana
THA.LOC104818134 Tarenaya hassleriana
THA.LOC104820052 Tarenaya hassleriana
Thecc.06G092800 Theobroma cacao
Thecc.09G041900 Theobroma cacao
Thecc.09G107200 Theobroma cacao
Thhalv10001964m.g Eutrema salsugineum
Thhalv10004002m.g Eutrema salsugineum
Thhalv10022304m.g Eutrema salsugineum
Thhalv10024708m.g Eutrema salsugineum
TPR.G10044 Trifolium pratense
TPR.G1388 Trifolium pratense
TPR.G23470 Trifolium pratense
TWI32G0444 Tripterygium wilfordii
TWI32G1232 Tripterygium wilfordii
TWI34G0244 Tripterygium wilfordii
TWI34G1942 Tripterygium wilfordii
TWI63G1363 Tripterygium wilfordii
unitig_0.g2803 Utricularia gibba
unitig_27.g24904 Utricularia gibba
unitig_27.g24905 Utricularia gibba
unitig_699.g19022 Utricularia gibba
unitig_699.g19023 Utricularia gibba
vmacro05365 Vaccinium macrocarpon
vmacro06227 Vaccinium macrocarpon
vmacro20720 Vaccinium macrocarpon
VMungo0251G0965 Vigna mungo
VMungo0464G1602 Vigna mungo
VMungo1309G2809 Vigna mungo
Zm00001eb152420 Zea mays
Zm00001eb237340 Zea mays
Zm00001eb281570 Zea mays
Zm00001eb370470 Zea mays

User provided reference genes

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