Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p35700 Brassica napus
A05p38990 Brassica napus
A06p16800 Brassica napus
A07p28510 Brassica napus
A07p42030 Brassica napus
A08p29230 Brassica napus
Aa31LG3G2590 Aethionema arabicum
Aa31LG4G6480 Aethionema arabicum
Aa31LG7G4970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2743 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4857 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1823 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1824 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1825 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.219 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3050 Anthoceros agrestis
Actinidia15517 Actinidia chinensis
Actinidia28942 Actinidia chinensis
Actinidia37910 Actinidia chinensis
Ah.00g001090 Amaranthus hybridus
Ah.00g001110 Amaranthus hybridus
Ah.15g091350 Amaranthus hybridus
AL1G33810 Arabidopsis lyrata
AL1G33820 Arabidopsis lyrata
AL2G36510 Arabidopsis lyrata
AL3G21390 Arabidopsis lyrata
AL4G26130 Arabidopsis lyrata
Aqoxy2G01547 Aquilegia oxysepala
Aqoxy5G00975 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3KDH9X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5GY58N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.62LGBX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BLF45B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F3SGCQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LVT2R8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NA36AX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S8I99S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V2ZWQA Arachis hypogaea
AT1G20810 Arabidopsis thaliana
AT1G20816 Arabidopsis thaliana
AT1G76405 Arabidopsis thaliana
AT3G10060 Arabidopsis thaliana
ATR0665G470 Amborella trichopoda
ATR0807G105 Amborella trichopoda
ATR0807G198 Amborella trichopoda
Atru.chr13.81 Acer truncatum
Atru.chr13.83 Acer truncatum
Atru.chr8.1674 Acer truncatum
AUR62024106 Chenopodium quinoa
AUR62024107 Chenopodium quinoa
AUR62035157 Chenopodium quinoa
AUR62035158 Chenopodium quinoa
AUR62040187 Chenopodium quinoa
AUR62042695 Chenopodium quinoa
BcaB02g07061 Brassica carinata
BcaB03g11574 Brassica carinata
BcaB03g16041 Brassica carinata
BcaB07g32073 Brassica carinata
BcaB07g32074 Brassica carinata
BcaC05g25982 Brassica carinata
BcaC05g25983 Brassica carinata
BcaC08g45531 Brassica carinata
BcaC08g47138 Brassica carinata
BcaC08g47254 Brassica carinata
BolC3t16608H Brassica oleracea
BolC5t30639H Brassica oleracea
BolC5t34458H Brassica oleracea
BolC6t38332H Brassica oleracea
BolC6t40085H Brassica oleracea
BraA05t22690Z Brassica rapa
BraA06t24787Z Brassica rapa
BraA06t24788Z Brassica rapa
BraA07t30489Z Brassica rapa
BraA07t31733Z Brassica rapa
BraA08t34858Z Brassica rapa
C03p43370 Brassica napus
C05p19360 Brassica napus
C05p58020 Brassica napus
C06p32060 Brassica napus
C06p50600 Brassica napus
CAN.G1330.2 Capsicum annuum
CAN.G1830.11 Capsicum annuum
CAN.G2106.1 Capsicum annuum
CANSAT25G3735 Cannabis sativa
CANSAT25G3870 Cannabis sativa
CARHR021230 Cardamine hirsuta
CARHR021240 Cardamine hirsuta
CARHR069960 Cardamine hirsuta
CARHR084560 Cardamine hirsuta
Carub.0001s2026 Capsella rubella
Carub.0001s2027 Capsella rubella
Carub.0002s2331 Capsella rubella
Carub.0003s0916 Capsella rubella
Ca_06247_v3 Cicer arietinum L.
Ca_11543_v3 Cicer arietinum L.
Ca_11565_v3 Cicer arietinum L.
Ca_15392_v3 Cicer arietinum L.
CBR_g30794 Chara braunii
CBR_g44541 Chara braunii
Cc06_g04850 Coffea canephora
Cc10_g00340 Coffea canephora
Cc10_g00360 Coffea canephora
CDE02G3585 Ceratophyllum demersum
CDE04G0169 Ceratophyllum demersum
CDE05G0091 Ceratophyllum demersum
CDE05G0488 Ceratophyllum demersum
CDE09G0920 Ceratophyllum demersum
Cfa014122 Carpinus fangiana
Cfa014124 Carpinus fangiana
Cfa016496 Carpinus fangiana
Ciclev10002424m.g Citrus clementina
Ciclev10002700m.g Citrus clementina
Ciclev10012638m.g Citrus clementina
CiPaw.07G134900 Carya illinoinensis
CiPaw.07G135100 Carya illinoinensis
CiPaw.08G076300 Carya illinoinensis
CiPaw.09G005800 Carya illinoinensis
ClCG08G009240 Citrullus lanatus
ClCG11G018910 Citrullus lanatus
COL.COLO4_36626 Corchorus olitorius
COL.COLO4_37860 Corchorus olitorius
Cpa.g.sc26.151 Carica papaya
Cpa.g.sc26.153 Carica papaya
Cpa.g.sc5.118 Carica papaya
Cre10.g466850 Chlamydomonas reinhardtii
Cre17.g733250 Chlamydomonas reinhardtii
CsaV3_3G036610 Cucumis sativus L.
CsaV3_4G037510 Cucumis sativus L.
CsaV3_6G031380 Cucumis sativus L.
CSS0006417 Camellia sinensis var. sinensis
CSS0014569 Camellia sinensis var. sinensis
CSS0024195 Camellia sinensis var. sinensis
CSS0034418 Camellia sinensis var. sinensis
DCAR_016792 Daucus carota
DCAR_017644 Daucus carota
Dinv31976 Davidia involucrata
Dinv35841 Davidia involucrata
Duzib041G0706 Durio zibethinus
Duzib106G0620 Durio zibethinus
Duzib116G0384 Durio zibethinus
Duzib116G0437 Durio zibethinus
ECA238G0508 Erigeron canadensis
ECA238G1996 Erigeron canadensis
ECA238G3840 Erigeron canadensis
EL10Ac1g01883 Beta vulgaris
EL10Ac1g01895 Beta vulgaris
EL10Ac7g16723 Beta vulgaris
Eucgr.F01795 Eucalyptus grandis
Eucgr.F01800 Eucalyptus grandis
Eucgr.F01803 Eucalyptus grandis
Eucgr.K02414 Eucalyptus grandis
FAN04G1208 Fragaria x ananassa
FAN04G3097 Fragaria x ananassa
FAN08G0029 Fragaria x ananassa
FAN08G0076 Fragaria x ananassa
FAN13G0876 Fragaria x ananassa
FAN13G2435 Fragaria x ananassa
FAN18G0260 Fragaria x ananassa
FvH4_5g25880 Fragaria vesca
FvH4_5g25920 Fragaria vesca
FvH4_6g17331 Fragaria vesca
Glyma.04G015400 Glycine max
Glyma.06G015300 Glycine max
Glyma.10G063800 Glycine max
Glyma.13G148400 Glycine max
Gohir.A01G102700 Gossypium hirsutum
Gohir.A01G103050 Gossypium hirsutum
Gohir.A01G211700 Gossypium hirsutum
Gohir.A05G177800 Gossypium hirsutum
Gohir.D01G088000 Gossypium hirsutum
Gohir.D01G200500 Gossypium hirsutum
Gohir.D05G181200 Gossypium hirsutum
Gorai.002G113700 Gossypium raimondii
Gorai.002G245200 Gossypium raimondii
Gorai.009G186200 Gossypium raimondii
GSVIVG01013409001 Vitis vinifera
GSVIVG01013411001 Vitis vinifera
GSVIVG01033728001 Vitis vinifera
HanXRQChr01g0016601 Helianthus annuus
HanXRQChr03g0080711 Helianthus annuus
HanXRQChr05g0144711 Helianthus annuus
HanXRQChr06g0185251 Helianthus annuus
HanXRQChr14g0427901 Helianthus annuus
HanXRQChr15g0492581 Helianthus annuus
Haze_22843 Corylus avellana
Haze_22846 Corylus avellana
Hma1.2p1_0612F.1_g188980 Hydrangea macrophylla
Hma1.2p1_0612F.1_g189000 Hydrangea macrophylla
Hma1.2p1_0669F.1_g200220 Hydrangea macrophylla
Hma1.2p1_1578F.1_g291810 Hydrangea macrophylla
Hma1.2p1_1578F.1_g291820 Hydrangea macrophylla
Hma1.2p1_1578F.1_g291830 Hydrangea macrophylla
HPP92_015207 Vanilla planifolia
HPP92_015233 Vanilla planifolia
HPP92_015234 Vanilla planifolia
HPP92_027841 Vanilla planifolia
Hund01795 Selenicereus undatus
Hund04101 Selenicereus undatus
Hund05085 Selenicereus undatus
Hund05086 Selenicereus undatus
Lalb_Chr11g0061401 Lupinus albus
Lalb_Chr11g0061421 Lupinus albus
Lalb_Chr21g0315301 Lupinus albus
Lj1g0018680 Lotus japonicus
Lj3A1008G65 Lonicera japonica
Lj4A6T36 Lonicera japonica
Lj4C811T3 Lonicera japonica
Lj5g0004178 Lotus japonicus
Lsat_1_v5_gn_2_1300 Lactuca sativa
Lsat_1_v5_gn_2_1320 Lactuca sativa
Lsat_1_v5_gn_2_24101 Lactuca sativa
Lsat_1_v5_gn_9_41801 Lactuca sativa
Manes.05G125700 Manihot esculenta
Manes.05G125900 Manihot esculenta
Manes.09G047800 Manihot esculenta
Manes.18G002900 Manihot esculenta
Mapoly0001s0026 Marchantia polymorpha
Mapoly0135s0005 Marchantia polymorpha
MBI05_g05759_MAGBIO Magnolia biondii
MBI08_g29079_MAGBIO Magnolia biondii
MCO01G739 Micromonas commoda
MCO05G151 Micromonas commoda
MCO07G511 Micromonas commoda
MD06G1005500 Malus domestica
MD06G1005700 Malus domestica
MD12G1101900 Malus domestica
Medtr1g061850 Medicago truncatula
Medtr3g115970 Medicago truncatula
Medtr3g115990 Medicago truncatula
MELO3C009415.2 Cucumis melo
MELO3C017046.2 Cucumis melo
MELO3C026523.2 Cucumis melo
Migut.C00375 Erythranthe guttata
Migut.C00377 Erythranthe guttata
Migut.J00481 Erythranthe guttata
MSTRG.24916 Avicennia marina
MSTRG.5790 Avicennia marina
MSTRG.998 Avicennia marina
Nitab4.5_0001756g0150 Nicotiana tabacum
Nitab4.5_0001756g0210 Nicotiana tabacum
Nitab4.5_0004281g0100 Nicotiana tabacum
Nitab4.5_0005347g0040 Nicotiana tabacum
Nitab4.5_0006709g0020 Nicotiana tabacum
Nitab4.5_0029491g0010 Nicotiana tabacum
Nn2g13922 Nelumbo nucifera
Nn5g27670 Nelumbo nucifera
Nn5g31022 Nelumbo nucifera
Oeu016871.1 Olea europaea
Oeu016875.3 Olea europaea
Oeu019571.1 Olea europaea
Oeu019572.1 Olea europaea
Oeu031869.1 Olea europaea
Os02g0117600 Oryza sativa ssp. japonica
Os02g0832200 Oryza sativa ssp. japonica
Peaxi162Scf00680g00415 Petunia axillaris
Peaxi162Scf00680g00417 Petunia axillaris
Peaxi162Scf01063g00114 Petunia axillaris
PGR083G0637 Punica granatum
PGR083G1854 Punica granatum
PGR142G0224 Punica granatum
PGSC0003DMG400009916 Solanum tuberosum
PGSC0003DMG400009918 Solanum tuberosum
Phvul.007G225600 Phaseolus vulgaris
Phvul.009G007100 Phaseolus vulgaris
Phvul.009G007300 Phaseolus vulgaris
Potri.005G254900 Populus trichocarpa
Potri.005G255100 Populus trichocarpa
Potri.016G096600 Populus trichocarpa
Pp3c16_8850 Physcomitrium patens
Pp3c17_4710 Physcomitrium patens
Pp3c25_1450 Physcomitrium patens
Pp3c5_19490 Physcomitrium patens
PRCOL_00000630 Prasinoderma coloniale
PRCOL_00000638 Prasinoderma coloniale
PRCOL_00001546 Prasinoderma coloniale
Prupe.5G006800 Prunus persica
Prupe.5G007000 Prunus persica
Psat5g008840 Pisum sativum
Psat5g008920 Pisum sativum
Psat6g078120 Pisum sativum
PSO170G2582 Papaver somniferum
PSO210G1579 Papaver somniferum
PSO339G2214 Papaver somniferum
PSO541G5829 Papaver somniferum
PSO675G2258 Papaver somniferum
PSO801G0321 Papaver somniferum
QL01p024803 Quercus lobata
QL02p015365 Quercus lobata
QL02p015396 Quercus lobata
QL02p015424 Quercus lobata
QL07p041198 Quercus lobata
QL07p041202 Quercus lobata
RcHm_v2.0_Chr1g0340031 Rosa chinensis
RcHm_v2.0_Chr3g0471471 Rosa chinensis
RcHm_v2.0_Chr7g0216351 Rosa chinensis
RcHm_v2.0_Chr7g0216421 Rosa chinensis
Rhsim03G0085600 Rhododendron simsii
Rhsim06G0004200 Rhododendron simsii
Rhsim07G0257200 Rhododendron simsii
Sabra05G0197400 Salix brachista
Sabra05G0197600 Salix brachista
Sabra16G0099800 Salix brachista
Sabra16G0099900 Salix brachista
SalBow3G4002 Salvia bowleyana
SalBow7G0166 Salvia bowleyana
Sc07g0004660 Simmondsia chinensis
Sc15g0004100 Simmondsia chinensis
Sc26g0004700 Simmondsia chinensis
Sed0004809 Sechium edule
Sed0011537 Sechium edule
Sed0015170 Sechium edule
SEGI_08504 Sequoiadendron giganteum
SEGI_09560 Sequoiadendron giganteum
SEGI_26708 Sequoiadendron giganteum
SEGI_27526 Sequoiadendron giganteum
SEGI_34722 Sequoiadendron giganteum
SGA_v2.0_scaffold133G34596 Striga asiatica
SGA_v2.0_scaffold133G34600 Striga asiatica
SGA_v2.0_scaffold75G24814 Striga asiatica
SMO114G0103 Selaginella moellendorffii
SMO117G0070 Selaginella moellendorffii
SMO347G0534 Selaginella moellendorffii
SMO367G0543 Selaginella moellendorffii
Solyc04g082660.2 Solanum lycopersicum
Solyc04g082680.3 Solanum lycopersicum
Solyc09g008650.3 Solanum lycopersicum
Sopen04g036290 Solanum pennellii
Sopen04g036310 Solanum pennellii
Sopen09g003450 Solanum pennellii
Sp1g18500 Schrenkiella parvula
Sp1g18510 Schrenkiella parvula
Sp3g08370 Schrenkiella parvula
Sp5g31560 Schrenkiella parvula
TAR376G0612 Trochodendron aralioides
TAR628G0191 Trochodendron aralioides
TAR636G1968 Trochodendron aralioides
THA.LOC104811999 Tarenaya hassleriana
THA.LOC104813743 Tarenaya hassleriana
THA.LOC104813746 Tarenaya hassleriana
THA.LOC104826941 Tarenaya hassleriana
Thecc.05G076600 Theobroma cacao
Thecc.08G063800 Theobroma cacao
Thecc.08G064000 Theobroma cacao
Thhalv10008601m.g Eutrema salsugineum
Thhalv10008937m.g Eutrema salsugineum
Thhalv10019232m.g Eutrema salsugineum
Thhalv10021451m.g Eutrema salsugineum
TPR.G27078 Trifolium pratense
TPR.G35796 Trifolium pratense
TPR.G38162 Trifolium pratense
TPR.G38180 Trifolium pratense
TWI12G0153 Tripterygium wilfordii
TWI12G0704 Tripterygium wilfordii
TWI56G1014 Tripterygium wilfordii
TWI77G0546 Tripterygium wilfordii
unitig_0.g2075 Utricularia gibba
unitig_8.g4124 Utricularia gibba
vmacro04420 Vaccinium macrocarpon
vmacro07354 Vaccinium macrocarpon
vmacro15052 Vaccinium macrocarpon
vmacro21778 Vaccinium macrocarpon
VMungo0720G1353 Vigna mungo
VMungo1309G0131 Vigna mungo
VMungo1309G1483 Vigna mungo
Zm00001eb209360 Zea mays
Zm00001eb259570 Zea mays
Zm00001eb302310 Zea mays

User provided reference genes

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