Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p43280 Brassica napus
A06p31010 Brassica napus
A10p27820 Brassica napus
Aa31LG1G17560 Aethionema arabicum
Aa31LG3G17530 Aethionema arabicum
Aa31LG3G17540 Aethionema arabicum
Aa31sc34G40 Aethionema arabicum
Actinidia04400 Actinidia chinensis
Actinidia10367 Actinidia chinensis
Actinidia25389 Actinidia chinensis
Actinidia29609 Actinidia chinensis
Actinidia30810 Actinidia chinensis
Actinidia33109 Actinidia chinensis
Ah.01g007490 Amaranthus hybridus
Ah.01g024020 Amaranthus hybridus
Ah.01g024030 Amaranthus hybridus
Ah.05g170640 Amaranthus hybridus
AL6G19860 Arabidopsis lyrata
AL8G23990 Arabidopsis lyrata
AL8G41700 Arabidopsis lyrata
Aqoxy5G01330 Aquilegia oxysepala
Aqoxy6G01463 Aquilegia oxysepala
Aqoxy6G01464 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0E4ZKW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5W7NNK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FV0XI2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IVYM6W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KCV3PX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KFP2BM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NI9N2T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZL8253 Arachis hypogaea
AT5G09460 Arabidopsis thaliana
AT5G50010 Arabidopsis thaliana
AT5G64340 Arabidopsis thaliana
ATR0022G040 Amborella trichopoda
ATR0022G065 Amborella trichopoda
Atru.chr13.1047 Acer truncatum
Atru.chr13.1048 Acer truncatum
Atru.chr6.1228 Acer truncatum
AUR62012897 Chenopodium quinoa
AUR62019010 Chenopodium quinoa
AUR62027121 Chenopodium quinoa
AUR62027851 Chenopodium quinoa
BcaB07g29736 Brassica carinata
BcaB07g29738 Brassica carinata
BcaB08g37202 Brassica carinata
BcaC01g06905 Brassica carinata
BcaC03g18257 Brassica carinata
BcaC03g18258 Brassica carinata
BolC2t12399H Brassica oleracea
BolC3t18454H Brassica oleracea
BolC8t50212H Brassica oleracea
BolC9t59551H Brassica oleracea
BraA02t09252Z Brassica rapa
BraA02t09253Z Brassica rapa
BraA06t26043Z Brassica rapa
BraA10t44831Z Brassica rapa
C02p63300 Brassica napus
C03p61950 Brassica napus
C09p67920 Brassica napus
CAN.G1658.7 Capsicum annuum
CAN.G1658.8 Capsicum annuum
CAN.G523.28 Capsicum annuum
CAN.G523.29 Capsicum annuum
CAN.G991.1 Capsicum annuum
CANSAT11G0868 Cannabis sativa
CARHR203920 Cardamine hirsuta
CARHR203940 Cardamine hirsuta
CARHR258680 Cardamine hirsuta
CARHR278270 Cardamine hirsuta
CARHR278280 Cardamine hirsuta
Carub.0006s0802 Capsella rubella
Carub.0006s0803 Capsella rubella
Carub.0008s0991 Capsella rubella
Carub.0008s0992 Capsella rubella
Carub.0008s2513 Capsella rubella
Carub.0008s2514 Capsella rubella
Ca_00156_v3 Cicer arietinum L.
Ca_05398_v3 Cicer arietinum L.
Cc02_g21020 Coffea canephora
Cc10_g15590 Coffea canephora
CDE10G0731 Ceratophyllum demersum
CDE10G0928 Ceratophyllum demersum
Cfa005695 Carpinus fangiana
Cfa013701 Carpinus fangiana
Ciclev10003472m.g Citrus clementina
Ciclev10003720m.g Citrus clementina
Ciclev10006463m.g Citrus clementina
Ciclev10006528m.g Citrus clementina
CiPaw.05G031100 Carya illinoinensis
CiPaw.05G031200 Carya illinoinensis
CiPaw.06G156800 Carya illinoinensis
CiPaw.06G156900 Carya illinoinensis
CiPaw.07G168100 Carya illinoinensis
CiPaw.07G168200 Carya illinoinensis
CiPaw.08G054100 Carya illinoinensis
CiPaw.08G054200 Carya illinoinensis
ClCG00G003730 Citrullus lanatus
ClCG08G011500 Citrullus lanatus
ClCG09G015900 Citrullus lanatus
ClCG10G009540 Citrullus lanatus
COL.COLO4_32356 Corchorus olitorius
COL.COLO4_35196 Corchorus olitorius
Cpa.g.c31184 Carica papaya
Cpa.g.sc1175.1 Carica papaya
CsaV3_2G030090 Cucumis sativus L.
CsaV3_4G009670 Cucumis sativus L.
CsaV3_7G007020 Cucumis sativus L.
CsaV3_7G007030 Cucumis sativus L.
CSS0010978 Camellia sinensis var. sinensis
CSS0016051 Camellia sinensis var. sinensis
CSS0046975 Camellia sinensis var. sinensis
DCAR_012866 Daucus carota
DCAR_029187 Daucus carota
DCAR_029188 Daucus carota
Dinv15987 Davidia involucrata
Dinv24160 Davidia involucrata
Dinv42637 Davidia involucrata
Dinv44836 Davidia involucrata
Duzib041G0605 Durio zibethinus
Duzib052G1081 Durio zibethinus
Duzib093G0625 Durio zibethinus
Duzib116G0593 Durio zibethinus
Duzib132G0533 Durio zibethinus
Duzib132G0573 Durio zibethinus
ECA246G0388 Erigeron canadensis
ECA247G1217 Erigeron canadensis
EL10Ac1g01104 Beta vulgaris
EL10Ac9g22086 Beta vulgaris
Eucgr.F00406 Eucalyptus grandis
Eucgr.F02127 Eucalyptus grandis
FAN04G1269 Fragaria x ananassa
FAN08G0378 Fragaria x ananassa
FAN13G1260 Fragaria x ananassa
FAN13G1646 Fragaria x ananassa
FAN18G0229 Fragaria x ananassa
FAN18G3889 Fragaria x ananassa
FvH4_5g35810 Fragaria vesca
Glyma.02G212200 Glycine max
Glyma.02G212300 Glycine max
Glyma.04G092900 Glycine max
Glyma.04G093000 Glycine max
Glyma.06G094700 Glycine max
Glyma.06G094800 Glycine max
Glyma.07G181000 Glycine max
Glyma.07G181100 Glycine max
Glyma.08G069600 Glycine max
Glyma.08G069700 Glycine max
Glyma.14G179900 Glycine max
Glyma.14G180100 Glycine max
Glyma.15G056600 Glycine max
Glyma.15G056700 Glycine max
Gohir.A03G175900 Gossypium hirsutum
Gohir.A03G175950 Gossypium hirsutum
Gohir.A05G221300 Gossypium hirsutum
Gohir.A05G265200 Gossypium hirsutum
Gohir.A05G265300 Gossypium hirsutum
Gohir.A06G032636 Gossypium hirsutum
Gohir.D02G199700 Gossypium hirsutum
Gohir.D02G199750 Gossypium hirsutum
Gohir.D05G224000 Gossypium hirsutum
Gohir.D05G267450 Gossypium hirsutum
Gohir.D05G267500 Gossypium hirsutum
Gohir.D06G032600 Gossypium hirsutum
Gorai.005G224300 Gossypium raimondii
Gorai.005G224400 Gossypium raimondii
Gorai.009G231400 Gossypium raimondii
Gorai.009G279600 Gossypium raimondii
Gorai.010G035900 Gossypium raimondii
HanXRQChr05g0163291 Helianthus annuus
HanXRQChr05g0163551 Helianthus annuus
HanXRQChr05g0163561 Helianthus annuus
HanXRQChr10g0278051 Helianthus annuus
Haze_10554 Corylus avellana
Haze_22345 Corylus avellana
Hma1.2p1_0010F.1_g007000 Hydrangea macrophylla
Hma1.2p1_0010F.1_g007010 Hydrangea macrophylla
Hma1.2p1_0125F.1_g059100 Hydrangea macrophylla
Hma1.2p1_1093F.1_g256090 Hydrangea macrophylla
HPP92_004086 Vanilla planifolia
HPP92_004103 Vanilla planifolia
HPP92_027236 Vanilla planifolia
Hund00371 Selenicereus undatus
Hund16874 Selenicereus undatus
Hund27005 Selenicereus undatus
Lalb_Chr04g0252981 Lupinus albus
Lalb_Chr04g0252991 Lupinus albus
Lalb_Chr05g0217651 Lupinus albus
Lalb_Chr05g0217661 Lupinus albus
Lalb_Chr08g0242361 Lupinus albus
Lalb_Chr08g0242371 Lupinus albus
Lalb_Chr11g0065111 Lupinus albus
Lalb_Chr11g0065121 Lupinus albus
Lalb_Chr17g0344411 Lupinus albus
Lalb_Chr17g0344421 Lupinus albus
Lj1g0001104 Lotus japonicus
Lj1g0003364 Lotus japonicus
Lj4C91T0 Lonicera japonica
Lj4g0016585 Lotus japonicus
Lj4g0020895 Lotus japonicus
Lj4P733T2 Lonicera japonica
Lj6g0012273 Lotus japonicus
LjContig00408g0004832 Lotus japonicus
LjContig00408g0015397 Lotus japonicus
Lsat_1_v5_gn_1_2200 Lactuca sativa
Lsat_1_v5_gn_6_105780 Lactuca sativa
Manes.02G146800 Manihot esculenta
Manes.02G146900 Manihot esculenta
Manes.07G036900 Manihot esculenta
Manes.07G037000 Manihot esculenta
Manes.10G102000 Manihot esculenta
Manes.10G102100 Manihot esculenta
Manes.18G061200 Manihot esculenta
Manes.18G061300 Manihot esculenta
MBI02_g18287_MAGBIO Magnolia biondii
MBI06_g42716_MAGBIO Magnolia biondii
MD04G1047500 Malus domestica
MD04G1047600 Malus domestica
MD08G1192900 Malus domestica
MD08G1193000 Malus domestica
MD15G1381700 Malus domestica
MD15G1381800 Malus domestica
Medtr2g009360 Medicago truncatula
Medtr3g098450 Medicago truncatula
Medtr5g065670 Medicago truncatula
MELO3C011067.2 Cucumis melo
MELO3C018591.2 Cucumis melo
MELO3C024839.2 Cucumis melo
Migut.B00564 Erythranthe guttata
Migut.B00565 Erythranthe guttata
Migut.L01931 Erythranthe guttata
Migut.L01932 Erythranthe guttata
MSTRG.10269 Avicennia marina
MSTRG.16609 Avicennia marina
MSTRG.26763 Avicennia marina
MSTRG.27812 Avicennia marina
MSTRG.5276 Avicennia marina
Nitab4.5_0001264g0220 Nicotiana tabacum
Nitab4.5_0001264g0230 Nicotiana tabacum
Nitab4.5_0001507g0060 Nicotiana tabacum
Nitab4.5_0002025g0030 Nicotiana tabacum
Nitab4.5_0002650g0060 Nicotiana tabacum
Nitab4.5_0004381g0040 Nicotiana tabacum
Nitab4.5_0011953g0010 Nicotiana tabacum
Nn1g05505 Nelumbo nucifera
Nn5g29940 Nelumbo nucifera
Nn5g29941 Nelumbo nucifera
Oeu010536.1 Olea europaea
Oeu022086.1 Olea europaea
Oeu022087.1 Olea europaea
Oeu029675.1 Olea europaea
Oeu041409.1 Olea europaea
Oeu049222.1 Olea europaea
Oeu049223.1 Olea europaea
Oeu050418.1 Olea europaea
Oeu060039.1 Olea europaea
Os03g0391700 Oryza sativa ssp. japonica
Peaxi162Scf00160g01119 Petunia axillaris
Peaxi162Scf00281g00710 Petunia axillaris
Peaxi162Scf00299g00815 Petunia axillaris
PGR042G0850 Punica granatum
PGR042G1641 Punica granatum
PGSC0003DMG400002044 Solanum tuberosum
PGSC0003DMG400012901 Solanum tuberosum
PGSC0003DMG400033578 Solanum tuberosum
Phvul.002G211200 Phaseolus vulgaris
Phvul.002G211300 Phaseolus vulgaris
Phvul.006G203400 Phaseolus vulgaris
Phvul.006G203500 Phaseolus vulgaris
Phvul.008G179500 Phaseolus vulgaris
Phvul.008G179600 Phaseolus vulgaris
Phvul.009G038200 Phaseolus vulgaris
Phvul.009G038300 Phaseolus vulgaris
Potri.002G103300 Populus trichocarpa
Potri.002G103400 Populus trichocarpa
Potri.005G158000 Populus trichocarpa
Potri.005G158100 Populus trichocarpa
Potri.007G112800 Populus trichocarpa
Potri.007G112900 Populus trichocarpa
Potri.017G047932 Populus trichocarpa
Potri.017G048000 Populus trichocarpa
Prupe.1G527600 Prunus persica
Prupe.1G527700 Prunus persica
Prupe.8G067600 Prunus persica
Prupe.8G067700 Prunus persica
Psat1g215520 Pisum sativum
Psat2g065840 Pisum sativum
Psat2g065880 Pisum sativum
PSO541G2838 Papaver somniferum
PSO675G6469 Papaver somniferum
QL09p017152 Quercus lobata
QL11p023836 Quercus lobata
RcHm_v2.0_Chr7g0237501 Rosa chinensis
RcHm_v2.0_Chr7g0237511 Rosa chinensis
Rhsim05G0102500 Rhododendron simsii
Rhsim06G0074100 Rhododendron simsii
Rhsim07G0210000 Rhododendron simsii
Sabra02G0081000 Salix brachista
Sabra05G0120800 Salix brachista
Sabra07G0092200 Salix brachista
Sabra17G0032400 Salix brachista
Sabra17G0033700 Salix brachista
SalBow6G2185 Salvia bowleyana
SalBow6G2305 Salvia bowleyana
Sc01g0001030 Simmondsia chinensis
Sc08g0003860 Simmondsia chinensis
Sc23g0000580 Simmondsia chinensis
Sc26g0000240 Simmondsia chinensis
Sc26g0000250 Simmondsia chinensis
Sed0003373 Sechium edule
Sed0006645 Sechium edule
Sed0009224 Sechium edule
Sed0014860 Sechium edule
Sed0017055 Sechium edule
Sed0017446 Sechium edule
Sed0020961 Sechium edule
Sed0024443 Sechium edule
SEGI_04003 Sequoiadendron giganteum
SEGI_08574 Sequoiadendron giganteum
SEGI_08629 Sequoiadendron giganteum
SGA_v2.0_scaffold145G36024 Striga asiatica
SGA_v2.0_scaffold14G07146 Striga asiatica
SGA_v2.0_scaffold219G42570 Striga asiatica
SGA_v2.0_scaffold94G28577 Striga asiatica
SMO230G0062 Selaginella moellendorffii
Solyc01g105690.2 Solanum lycopersicum
Solyc01g105700.3 Solanum lycopersicum
Solyc04g076030.3 Solanum lycopersicum
Solyc04g076033.1 Solanum lycopersicum
Solyc12g087890.3 Solanum lycopersicum
Solyc12g087895.1 Solanum lycopersicum
Sopen01g048140 Solanum pennellii
Sopen04g029980 Solanum pennellii
Sopen12g029930 Solanum pennellii
Sp2g27410 Schrenkiella parvula
Sp6g33870 Schrenkiella parvula
TAR376G0504 Trochodendron aralioides
TAR381G0451 Trochodendron aralioides
TAR381G1650 Trochodendron aralioides
TAR624G0269 Trochodendron aralioides
TAR625G0049 Trochodendron aralioides
TAR628G0401 Trochodendron aralioides
TAR628G0605 Trochodendron aralioides
THA.LOC104806804 Tarenaya hassleriana
THA.LOC104818447 Tarenaya hassleriana
Thecc.02G132000 Theobroma cacao
Thecc.02G132100 Theobroma cacao
Thecc.08G067700 Theobroma cacao
Thhalv10005425m.g Eutrema salsugineum
Thhalv10005432m.g Eutrema salsugineum
Thhalv10015558m.g Eutrema salsugineum
Thhalv10015779m.g Eutrema salsugineum
TPR.G18437 Trifolium pratense
TPR.G18441 Trifolium pratense
TPR.G9504 Trifolium pratense
TWI12G0724 Tripterygium wilfordii
TWI14G0408 Tripterygium wilfordii
TWI23G0561 Tripterygium wilfordii
TWI56G0398 Tripterygium wilfordii
unitig_62.g23628 Utricularia gibba
unitig_699.g19865 Utricularia gibba
vmacro04680 Vaccinium macrocarpon
vmacro19953 Vaccinium macrocarpon
vmacro21312 Vaccinium macrocarpon
VMungo0251G2544 Vigna mungo
VMungo0540G1031 Vigna mungo
VMungo0647G2559 Vigna mungo
VMungo1309G0268 Vigna mungo
Zm00001eb019090 Zea mays
Zm00001eb392530 Zea mays

User provided reference genes

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