Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03930 Brassica napus
A01p23800 Brassica napus
A03p48050 Brassica napus
A03p62950 Brassica napus
A07p17520 Brassica napus
A09p10000 Brassica napus
A09p44040 Brassica napus
Aa31LG1G14960 Aethionema arabicum
Aa31LG2G15960 Aethionema arabicum
Aa31LG4G19030 Aethionema arabicum
Actinidia00539 Actinidia chinensis
Actinidia19200 Actinidia chinensis
Actinidia22524 Actinidia chinensis
Actinidia27886 Actinidia chinensis
Ah.01g019190 Amaranthus hybridus
Ah.03g141140 Amaranthus hybridus
Ah.05g177040 Amaranthus hybridus
AL5G31290 Arabidopsis lyrata
AL7G16650 Arabidopsis lyrata
AL8G45100 Arabidopsis lyrata
Aqoxy5G01581 Aquilegia oxysepala
Aqoxy6G01165 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.39NQDQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BPXV57 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HXWY1L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RJ9RH5 Arachis hypogaea
AT4G34560 Arabidopsis thaliana
AT5G66440 Arabidopsis thaliana
ATR0568G223 Amborella trichopoda
Atru.chr5.3055 Acer truncatum
AUR62004089 Chenopodium quinoa
AUR62007601 Chenopodium quinoa
AUR62011296 Chenopodium quinoa
AUR62014496 Chenopodium quinoa
AUR62038042 Chenopodium quinoa
BcaB01g00565 Brassica carinata
BcaB02g10030 Brassica carinata
BcaB05g23254 Brassica carinata
BcaB05g23255 Brassica carinata
BcaC04g23126 Brassica carinata
BcaC06g34702 Brassica carinata
BcaC07g39561 Brassica carinata
BcaC09g50057 Brassica carinata
BcaNung00687 Brassica carinata
BcaNung05716 Brassica carinata
BcaNung05717 Brassica carinata
BolC1t00411H Brassica oleracea
BolC1t02894H Brassica oleracea
BolC7t43068H Brassica oleracea
BolC7t45123H Brassica oleracea
BolC7t46492H Brassica oleracea
BolC8t50232H Brassica oleracea
BolC9t54075H Brassica oleracea
BraA01t00380Z Brassica rapa
BraA01t02289Z Brassica rapa
BraA03t13912Z Brassica rapa
BraA03t15370Z Brassica rapa
BraA07t29472Z Brassica rapa
BraA09t36645Z Brassica rapa
BraA09t39862Z Brassica rapa
C01p04240 Brassica napus
C01p29520 Brassica napus
C07p25470 Brassica napus
C07p46070 Brassica napus
C07p60620 Brassica napus
C08p26160 Brassica napus
C09p11860 Brassica napus
CAN.G1058.9 Capsicum annuum
CAN.G1226.48 Capsicum annuum
CAN.G1336.2 Capsicum annuum
CAN.G358.46 Capsicum annuum
CANSAT01G2116 Cannabis sativa
CANSAT11G0884 Cannabis sativa
CANSAT25G1766 Cannabis sativa
CARHR242840 Cardamine hirsuta
CARHR281310 Cardamine hirsuta
Carub.0007s0573 Capsella rubella
Carub.0008s2808 Capsella rubella
Ca_15357_v3 Cicer arietinum L.
Ca_20902_v3 Cicer arietinum L.
Ca_22298_v3 Cicer arietinum L.
Ca_22328_v3 Cicer arietinum L.
Cc02_g17320 Coffea canephora
Cc07_g09890 Coffea canephora
Cc10_g02570 Coffea canephora
CDE02G3540 Ceratophyllum demersum
CDE05G0151 Ceratophyllum demersum
CDE06G1782 Ceratophyllum demersum
Cfa004342 Carpinus fangiana
Cfa005035 Carpinus fangiana
Cfa005037 Carpinus fangiana
Ciclev10027088m.g Citrus clementina
Ciclev10029211m.g Citrus clementina
CiPaw.01G045700 Carya illinoinensis
CiPaw.02G020500 Carya illinoinensis
CiPaw.05G066900 Carya illinoinensis
CiPaw.06G133800 Carya illinoinensis
CiPaw.06G133900 Carya illinoinensis
ClCG01G019770 Citrullus lanatus
ClCG07G008620 Citrullus lanatus
ClCG11G004240 Citrullus lanatus
COL.COLO4_22034 Corchorus olitorius
COL.COLO4_25968 Corchorus olitorius
Cpa.g.sc106.17 Carica papaya
Cpa.g.sc1139.1 Carica papaya
CsaV3_2G014930 Cucumis sativus L.
CsaV3_4G005530 Cucumis sativus L.
CsaV3_6G046480 Cucumis sativus L.
CSS0005210 Camellia sinensis var. sinensis
CSS0035839 Camellia sinensis var. sinensis
CSS0042795 Camellia sinensis var. sinensis
DCAR_003661 Daucus carota
DCAR_013834 Daucus carota
DCAR_021933 Daucus carota
DCAR_022466 Daucus carota
DCAR_022986 Daucus carota
DCAR_025960 Daucus carota
DCAR_028973 Daucus carota
Dinv13495 Davidia involucrata
Dinv23498 Davidia involucrata
Dinv39444 Davidia involucrata
Dinv40015 Davidia involucrata
Dinv42048 Davidia involucrata
Duzib052G0040 Durio zibethinus
Duzib132G0910 Durio zibethinus
Duzib147G1275 Durio zibethinus
Duzib187G2007 Durio zibethinus
Duzib248G0723 Durio zibethinus
ECA232G3131 Erigeron canadensis
ECA232G4251 Erigeron canadensis
ECA236G4502 Erigeron canadensis
EL10Ac9g21701 Beta vulgaris
EL10As8g23912 Beta vulgaris
Eucgr.I01283 Eucalyptus grandis
Eucgr.I02410 Eucalyptus grandis
FAN15G1825 Fragaria x ananassa
FAN19G1879 Fragaria x ananassa
FAN23G0952 Fragaria x ananassa
FAN24G3069 Fragaria x ananassa
FAN26G1634 Fragaria x ananassa
FAN27G1258 Fragaria x ananassa
FAN28G1045 Fragaria x ananassa
FvH4_1g12780 Fragaria vesca
FvH4_2g09200 Fragaria vesca
FvH4_7g02350 Fragaria vesca
Glyma.01G171700 Glycine max
Glyma.02G054400 Glycine max
Glyma.04G011000 Glycine max
Glyma.06G010900 Glycine max
Glyma.11G115300 Glycine max
Glyma.12G041200 Glycine max
Glyma.16G134800 Glycine max
Gohir.A03G196000 Gossypium hirsutum
Gohir.A10G096200 Gossypium hirsutum
Gohir.A11G182600 Gossypium hirsutum
Gohir.A12G063300 Gossypium hirsutum
Gohir.A13G033300 Gossypium hirsutum
Gohir.D02G217101 Gossypium hirsutum
Gohir.D10G091900 Gossypium hirsutum
Gohir.D11G189200 Gossypium hirsutum
Gohir.D12G063200 Gossypium hirsutum
Gohir.D13G031200 Gossypium hirsutum
Gorai.005G245100 Gossypium raimondii
Gorai.007G201500 Gossypium raimondii
Gorai.008G066400 Gossypium raimondii
Gorai.011G100900 Gossypium raimondii
Gorai.013G035600 Gossypium raimondii
GSVIVG01018920001 Vitis vinifera
HanXRQChr04g0103991 Helianthus annuus
HanXRQChr09g0261391 Helianthus annuus
HanXRQChr09g0268971 Helianthus annuus
HanXRQChr11g0325491 Helianthus annuus
HanXRQChr13g0395401 Helianthus annuus
HanXRQChr13g0397741 Helianthus annuus
HanXRQChr16g0501491 Helianthus annuus
HanXRQChr16g0505471 Helianthus annuus
Haze_02350 Corylus avellana
Haze_02351 Corylus avellana
Haze_02352 Corylus avellana
Haze_15059 Corylus avellana
Hma1.2p1_0066F.1_g036220 Hydrangea macrophylla
Hma1.2p1_0224F.1_g094445 Hydrangea macrophylla
Hma1.2p1_0469F.1_g159000 Hydrangea macrophylla
Hma1.2p1_2496F.1_g323290 Hydrangea macrophylla
Hma1.2p1_2993F.1_g331370 Hydrangea macrophylla
HPP92_006256 Vanilla planifolia
HPP92_009680 Vanilla planifolia
HPP92_023425 Vanilla planifolia
Lalb_Chr01g0002391 Lupinus albus
Lalb_Chr11g0061321 Lupinus albus
Lalb_Chr16g0377721 Lupinus albus
Lalb_Chr16g0391051 Lupinus albus
Lj1g0015330 Lotus japonicus
Lj2g0012061 Lotus japonicus
Lj2P456T45 Lonicera japonica
Lj3g0014272 Lotus japonicus
Lj4C36T10 Lonicera japonica
Lj4g0011278 Lotus japonicus
Lj4P518T39 Lonicera japonica
Lju682A1T13 Lonicera japonica
Lsat_1_v5_gn_4_117861 Lactuca sativa
Lsat_1_v5_gn_5_27281 Lactuca sativa
Lsat_1_v5_gn_7_90501 Lactuca sativa
Lsat_1_v5_gn_9_108241 Lactuca sativa
Manes.02G096700 Manihot esculenta
Manes.04G074762 Manihot esculenta
Manes.11G085200 Manihot esculenta
MBI10_g06727_MAGBIO Magnolia biondii
MBI16_g08780_MAGBIO Magnolia biondii
MBI16_g30353_MAGBIO Magnolia biondii
MD02G1143400 Malus domestica
MD05G1064000 Malus domestica
MD10G1072700 Malus domestica
Medtr3g117050 Medicago truncatula
Medtr4g070630 Medicago truncatula
Medtr4g070640 Medicago truncatula
Medtr4g070660 Medicago truncatula
Medtr5g020900 Medicago truncatula
Medtr8g077085 Medicago truncatula
MELO3C007844.2 Cucumis melo
MELO3C016396.2 Cucumis melo
MELO3C023313.2 Cucumis melo
Migut.B00219 Erythranthe guttata
Migut.C00753 Erythranthe guttata
Migut.H02524 Erythranthe guttata
Migut.L00024 Erythranthe guttata
Migut.N01252 Erythranthe guttata
MSTRG.20069 Avicennia marina
MSTRG.24281 Avicennia marina
MSTRG.25190 Avicennia marina
MSTRG.27689 Avicennia marina
MSTRG.5404 Avicennia marina
Nitab4.5_0000199g0040 Nicotiana tabacum
Nitab4.5_0000308g0310 Nicotiana tabacum
Nitab4.5_0000308g0350 Nicotiana tabacum
Nitab4.5_0000344g0170 Nicotiana tabacum
Nitab4.5_0000746g0010 Nicotiana tabacum
Nitab4.5_0001617g0020 Nicotiana tabacum
Nitab4.5_0002828g0160 Nicotiana tabacum
Nitab4.5_0003001g0010 Nicotiana tabacum
Nitab4.5_0003265g0050 Nicotiana tabacum
Nitab4.5_0008347g0010 Nicotiana tabacum
Nitab4.5_0009228g0010 Nicotiana tabacum
Nitab4.5_0009921g0040 Nicotiana tabacum
Nitab4.5_0011923g0020 Nicotiana tabacum
Nitab4.5_0014783g0010 Nicotiana tabacum
Nitab4.5_0018301g0010 Nicotiana tabacum
Nitab4.5_0019909g0010 Nicotiana tabacum
Nn1g04912 Nelumbo nucifera
Nn5g29676 Nelumbo nucifera
Oeu023336.1 Olea europaea
Oeu027429.1 Olea europaea
Oeu029154.2 Olea europaea
Oeu030425.2 Olea europaea
Oeu041631.1 Olea europaea
Oeu061220.1 Olea europaea
Oeu063612.1 Olea europaea
Peaxi162Scf00010g00116 Petunia axillaris
Peaxi162Scf00016g00515 Petunia axillaris
Peaxi162Scf00043g00284 Petunia axillaris
Peaxi162Scf00140g00031 Petunia axillaris
Peaxi162Scf00303g00092 Petunia axillaris
Peaxi162Scf00418g00055 Petunia axillaris
Peaxi162Scf00684g00210 Petunia axillaris
PGR031G2349 Punica granatum
PGR119G0350 Punica granatum
PGR142G0388 Punica granatum
PGSC0003DMG400000715 Solanum tuberosum
PGSC0003DMG400000716 Solanum tuberosum
PGSC0003DMG400000717 Solanum tuberosum
PGSC0003DMG400000718 Solanum tuberosum
PGSC0003DMG400003523 Solanum tuberosum
PGSC0003DMG400003697 Solanum tuberosum
PGSC0003DMG400016903 Solanum tuberosum
PGSC0003DMG400022575 Solanum tuberosum
Phvul.002G033700 Phaseolus vulgaris
Phvul.003G255700 Phaseolus vulgaris
Phvul.009G022300 Phaseolus vulgaris
Phvul.009G022400 Phaseolus vulgaris
Phvul.011G043200 Phaseolus vulgaris
Potri.004G157300 Populus trichocarpa
Potri.005G120300 Populus trichocarpa
Potri.007G021500 Populus trichocarpa
Potri.009G119000 Populus trichocarpa
Prupe.6G200500 Prunus persica
Prupe.7G158300 Prunus persica
Prupe.8G094100 Prunus persica
Psat0s3397g0040 Pisum sativum
Psat2g157560 Pisum sativum
Psat4g095000 Pisum sativum
Psat7g183480 Pisum sativum
PSO541G5621 Papaver somniferum
PSO675G0347 Papaver somniferum
PSO832G2070 Papaver somniferum
QL06p047145 Quercus lobata
QL11p044367 Quercus lobata
RcHm_v2.0_Chr2g0100901 Rosa chinensis
RcHm_v2.0_Chr6g0265051 Rosa chinensis
Rhsim06G0030100 Rhododendron simsii
Rhsim08G0119900 Rhododendron simsii
Rhsim11G0179200 Rhododendron simsii
Sabra04G0105300 Salix brachista
Sabra05G0099000 Salix brachista
Sabra07G0018500 Salix brachista
Sabra09G0091300 Salix brachista
SalBow3G2565 Salvia bowleyana
SalBow6G3784 Salvia bowleyana
SalBow8G3194 Salvia bowleyana
SalBow8G4985 Salvia bowleyana
Sc02g0005800 Simmondsia chinensis
Sc03g0003140 Simmondsia chinensis
Sc15g0007080 Simmondsia chinensis
Sc16g0002570 Simmondsia chinensis
Sed0004351 Sechium edule
Sed0010817 Sechium edule
Sed0016213 Sechium edule
Sed0023561 Sechium edule
SEGI_12452 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05819 Striga asiatica
SGA_v2.0_scaffold12G06315 Striga asiatica
SGA_v2.0_scaffold201G41384 Striga asiatica
SGA_v2.0_scaffold328G48815 Striga asiatica
SGA_v2.0_scaffold32G13180 Striga asiatica
SGA_v2.0_scaffold47G17648 Striga asiatica
SGA_v2.0_scaffold58G20512 Striga asiatica
Solyc01g109800.2 Solanum lycopersicum
Solyc01g109810.2 Solanum lycopersicum
Solyc02g084960.1 Solanum lycopersicum
Solyc03g033860.1 Solanum lycopersicum
Solyc04g080640.1 Solanum lycopersicum
Sopen01g051990 Solanum pennellii
Sopen01g052000 Solanum pennellii
Sopen01g052010 Solanum pennellii
Sopen01g052020 Solanum pennellii
Sopen02g029630 Solanum pennellii
Sopen03g006620 Solanum pennellii
Sopen04g034230 Solanum pennellii
Sp2g30290 Schrenkiella parvula
Sp5g11300 Schrenkiella parvula
Sp7g32350 Schrenkiella parvula
TAR381G0807 Trochodendron aralioides
TAR625G0803 Trochodendron aralioides
TAR628G1444 Trochodendron aralioides
THA.LOC104807305 Tarenaya hassleriana
THA.LOC104818171 Tarenaya hassleriana
THA.LOC104819200 Tarenaya hassleriana
THA.LOC104819615 Tarenaya hassleriana
THA.LOC104826664 Tarenaya hassleriana
Thecc.01G031200 Theobroma cacao
Thecc.02G082100 Theobroma cacao
Thhalv10004766m.g Eutrema salsugineum
Thhalv10010637m.g Eutrema salsugineum
Thhalv10027578m.g Eutrema salsugineum
TPR.G14237 Trifolium pratense
TPR.G30499 Trifolium pratense
TPR.G32205 Trifolium pratense
TWI31G0051 Tripterygium wilfordii
TWI73G0715 Tripterygium wilfordii
TWI79G0604 Tripterygium wilfordii
TWI79G0729 Tripterygium wilfordii
unitig_0.g472 Utricularia gibba
unitig_0.g62 Utricularia gibba
unitig_578.g16076 Utricularia gibba
unitig_60.g25533 Utricularia gibba
unitig_8.g4930 Utricularia gibba
vmacro17476 Vaccinium macrocarpon
VMungo0251G1101 Vigna mungo
VMungo0251G1135 Vigna mungo
VMungo1215G0703 Vigna mungo
VMungo1309G2481 Vigna mungo

User provided reference genes

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